RNA–Protein interactions for RNA: ENST00000464187.1

COL5A1-205, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 1,830 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-205ENST00000464187 CALCOCO1Q9P1Z2 691 aa15.33■□□□□ 0.05
COL5A1-205ENST00000464187 HMGXB4Q9UGU5 601 aa15.33■□□□□ 0.05
COL5A1-205ENST00000464187 CXCL10P02778 98 aa15.33■□□□□ 0.04
COL5A1-205ENST00000464187 RARAP10276 462 aa15.33■□□□□ 0.04
COL5A1-205ENST00000464187 CLCNKBP51801 687 aa15.33■□□□□ 0.04
COL5A1-205ENST00000464187 SKOR1P84550 965 aa15.33■□□□□ 0.04
COL5A1-205ENST00000464187 INCA1Q0VD86 236 aa15.33■□□□□ 0.04
COL5A1-205ENST00000464187 PTP4A2Q12974 167 aa15.33■□□□□ 0.04
COL5A1-205ENST00000464187 GRIK3Q13003 919 aa15.33■□□□□ 0.04
COL5A1-205ENST00000464187 TCTN1Q2MV58 587 aa15.33■□□□□ 0.04
COL5A1-205ENST00000464187 SV2CQ496J9 727 aa15.33■□□□□ 0.04
COL5A1-205ENST00000464187 CEP85LQ5SZL2 805 aa15.33■□□□□ 0.04
COL5A1-205ENST00000464187 LIN9Q5TKA1 542 aa15.33■□□□□ 0.04
COL5A1-205ENST00000464187 CCDC137Q6PK04 289 aaKnown RBP15.33■□□□□ 0.04
COL5A1-205ENST00000464187 GLB1LQ6UWU2 654 aa15.33■□□□□ 0.04
COL5A1-205ENST00000464187 DEFB128Q7Z7B8 93 aa15.33■□□□□ 0.04
COL5A1-205ENST00000464187 PHF13Q86YI8 300 aaPredicted RBP15.33■□□□□ 0.04
COL5A1-205ENST00000464187 C12orf50Q8NA57 414 aaPredicted RBP15.33■□□□□ 0.04
COL5A1-205ENST00000464187 C1orf131Q8NDD1 294 aaKnown RBP15.33■□□□□ 0.04
COL5A1-205ENST00000464187 OR2W6PQ8NHA6 318 aa15.33■□□□□ 0.04
COL5A1-205ENST00000464187 UBLCP1Q8WVY7 318 aaPredicted RBP15.33■□□□□ 0.04
COL5A1-205ENST00000464187 TWNKQ96RR1 684 aa15.33■□□□□ 0.04
COL5A1-205ENST00000464187 TMBIM4Q9HC24 238 aa15.33■□□□□ 0.04
COL5A1-205ENST00000464187 GDAP2Q9NXN4 497 aa15.33■□□□□ 0.04
COL5A1-205ENST00000464187 MTUS1Q9ULD2 1270 aa15.33■□□□□ 0.04
COL5A1-205ENST00000464187 BARX2Q9UMQ3 279 aaPredicted RBP15.33■□□□□ 0.04
COL5A1-205ENST00000464187 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.33■□□□□ 0.04
COL5A1-205ENST00000464187 CASTOR2A6NHX0 329 aa15.32■□□□□ 0.04
COL5A1-205ENST00000464187 PODXLO00592 558 aa15.32■□□□□ 0.04
COL5A1-205ENST00000464187 INPPL1O15357 1258 aa15.32■□□□□ 0.04
COL5A1-205ENST00000464187 SCN1AP35498 2009 aa15.32■□□□□ 0.04
COL5A1-205ENST00000464187 COILP38432 576 aaPredicted RBP15.32■□□□□ 0.04
COL5A1-205ENST00000464187 SLC1A1P43005 524 aa15.32■□□□□ 0.04
COL5A1-205ENST00000464187 RAD23BP54727 409 aa15.32■□□□□ 0.04
COL5A1-205ENST00000464187 DRG2P55039 364 aaKnown RBP15.32■□□□□ 0.04
COL5A1-205ENST00000464187 DHX9Q08211 1270 aaKnown RBP15.32■□□□□ 0.04
COL5A1-205ENST00000464187 ORC1Q13415 861 aa15.32■□□□□ 0.04
COL5A1-205ENST00000464187 PDCD11Q14690 1871 aaKnown RBP15.32■□□□□ 0.04
COL5A1-205ENST00000464187 SOWAHAQ2M3V2 549 aa15.32■□□□□ 0.04
COL5A1-205ENST00000464187 ZDHHC24Q6UX98 284 aa15.32■□□□□ 0.04
COL5A1-205ENST00000464187 TTC39CQ8N584 583 aa15.32■□□□□ 0.04
COL5A1-205ENST00000464187 ATP6V1G3Q96LB4 118 aa15.32■□□□□ 0.04
COL5A1-205ENST00000464187 MRPL45Q9BRJ2 306 aaKnown RBP15.32■□□□□ 0.04
COL5A1-205ENST00000464187 TMEM161AQ9NX61 479 aa15.32■□□□□ 0.04
COL5A1-205ENST00000464187 GRHL1Q9NZI5 618 aa15.32■□□□□ 0.04
COL5A1-205ENST00000464187 ADAM22Q9P0K1 906 aa15.32■□□□□ 0.04
COL5A1-205ENST00000464187 SNX24Q9Y343 169 aa15.32■□□□□ 0.04
COL5A1-205ENST00000464187 MYO1FO00160 1098 aa15.31■□□□□ 0.04
COL5A1-205ENST00000464187 PPFIA2O75334 1257 aa15.31■□□□□ 0.04
COL5A1-205ENST00000464187 PROSCO94903 275 aa15.31■□□□□ 0.04
COL5A1-205ENST00000464187 PAEPP09466 180 aa15.31■□□□□ 0.04
COL5A1-205ENST00000464187 FGFR1P11362 822 aa15.31■□□□□ 0.04
COL5A1-205ENST00000464187 BRD2P25440 801 aaKnown RBP15.31■□□□□ 0.04
COL5A1-205ENST00000464187 RPL21P46778 160 aaKnown RBP15.31■□□□□ 0.04
COL5A1-205ENST00000464187 NDST1P52848 882 aa15.31■□□□□ 0.04
COL5A1-205ENST00000464187 ZNF844Q08AG5 666 aa15.31■□□□□ 0.04
COL5A1-205ENST00000464187 UPP1Q16831 310 aa15.31■□□□□ 0.04
COL5A1-205ENST00000464187 DNAJC21Q5F1R6 531 aaKnown RBP15.31■□□□□ 0.04
COL5A1-205ENST00000464187 CLLU1OSQ5K130 101 aa15.31■□□□□ 0.04
COL5A1-205ENST00000464187 MMS22LQ6ZRQ5 1243 aa15.31■□□□□ 0.04
COL5A1-205ENST00000464187 FAM43BQ6ZT52 329 aaPredicted RBP15.31■□□□□ 0.04
COL5A1-205ENST00000464187 SLC4A11Q8NBS3 891 aa15.31■□□□□ 0.04
COL5A1-205ENST00000464187 TMEM176AQ96HP8 235 aa15.31■□□□□ 0.04
COL5A1-205ENST00000464187 VCPIP1Q96JH7 1222 aa15.31■□□□□ 0.04
COL5A1-205ENST00000464187 PAAF1Q9BRP4 392 aa15.31■□□□□ 0.04
COL5A1-205ENST00000464187 CAPS2Q9BXY5 557 aa15.31■□□□□ 0.04
COL5A1-205ENST00000464187 ELOVL4Q9GZR5 314 aa15.31■□□□□ 0.04
COL5A1-205ENST00000464187 ELAC1Q9H777 363 aaKnown RBP15.31■□□□□ 0.04
COL5A1-205ENST00000464187 FSCN2O14926 492 aa15.31■□□□□ 0.04
COL5A1-205ENST00000464187 CD19P15391 556 aa15.31■□□□□ 0.04
COL5A1-205ENST00000464187 IGFBP6P24592 240 aaPredicted RBP15.31■□□□□ 0.04
COL5A1-205ENST00000464187 RPL9P32969 192 aaKnown RBP15.31■□□□□ 0.04
COL5A1-205ENST00000464187 FNTAP49354 379 aa15.31■□□□□ 0.04
COL5A1-205ENST00000464187 C1QBPQ07021 282 aaKnown RBP15.31■□□□□ 0.04
COL5A1-205ENST00000464187 TUSC3Q13454 348 aa15.31■□□□□ 0.04
COL5A1-205ENST00000464187 MAMLD1Q13495 774 aa15.31■□□□□ 0.04
COL5A1-205ENST00000464187 DAB2IPQ5VWQ8 1189 aa15.31■□□□□ 0.04
COL5A1-205ENST00000464187 PLEKHA7Q6IQ23 1121 aa15.31■□□□□ 0.04
COL5A1-205ENST00000464187 KDM7AQ6ZMT4 941 aa15.31■□□□□ 0.04
COL5A1-205ENST00000464187 C3orf58Q8NDZ4 430 aa15.31■□□□□ 0.04
COL5A1-205ENST00000464187 TFAP2BQ92481 460 aa15.31■□□□□ 0.04
COL5A1-205ENST00000464187 DDX27Q96GQ7 796 aaKnown RBP15.31■□□□□ 0.04
COL5A1-205ENST00000464187 RUNDC3BQ96NL0 473 aa15.31■□□□□ 0.04
COL5A1-205ENST00000464187 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.3■□□□□ 0.04
COL5A1-205ENST00000464187 HMGB1P1B2RPK0 211 aaPredicted RBP15.3■□□□□ 0.04
COL5A1-205ENST00000464187 HUS1O60921 280 aa15.3■□□□□ 0.04
COL5A1-205ENST00000464187 LLGL1Q15334 1064 aa15.3■□□□□ 0.04
COL5A1-205ENST00000464187 NOMO2Q5JPE7 1267 aa15.3■□□□□ 0.04
COL5A1-205ENST00000464187 PPP1R2P3Q6NXS1 205 aa15.3■□□□□ 0.04
COL5A1-205ENST00000464187 APPL2Q8NEU8 664 aa15.3■□□□□ 0.04
COL5A1-205ENST00000464187 TET1Q8NFU7 2136 aa15.3■□□□□ 0.04
COL5A1-205ENST00000464187 FBXO25Q8TCJ0 367 aa15.3■□□□□ 0.04
COL5A1-205ENST00000464187 HERPUD2Q9BSE4 406 aa15.3■□□□□ 0.04
COL5A1-205ENST00000464187 PLVAPQ9BX97 442 aa15.3■□□□□ 0.04
COL5A1-205ENST00000464187 NT5C1AQ9BXI3 368 aa15.3■□□□□ 0.04
COL5A1-205ENST00000464187 LRRC19Q9H756 370 aa15.3■□□□□ 0.04
COL5A1-205ENST00000464187 PCDHB7Q9Y5E2 793 aa15.3■□□□□ 0.04
COL5A1-205ENST00000464187 GJB6O95452 261 aa15.29■□□□□ 0.04
COL5A1-205ENST00000464187 IVLP07476 585 aa15.29■□□□□ 0.04
COL5A1-205ENST00000464187 NR1D1P20393 614 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms