RNA–Protein interactions for RNA: ENST00000464078.5

HMGN1-210, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 508 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-210ENST00000464078 GARTP22102 1010 aa18.54■□□□□ 0.56
HMGN1-210ENST00000464078 LHX1P48742 406 aa18.54■□□□□ 0.56
HMGN1-210ENST00000464078 PDE6CP51160 858 aa18.54■□□□□ 0.56
HMGN1-210ENST00000464078 CREB5Q02930 508 aa18.54■□□□□ 0.56
HMGN1-210ENST00000464078 KCNA1Q09470 495 aa18.54■□□□□ 0.56
HMGN1-210ENST00000464078 NR1H3Q13133 447 aa18.54■□□□□ 0.56
HMGN1-210ENST00000464078 CCDC142Q17RM4 750 aa18.54■□□□□ 0.56
HMGN1-210ENST00000464078 C8orf34Q49A92 452 aa18.54■□□□□ 0.56
HMGN1-210ENST00000464078 PSAPL1Q6NUJ1 521 aa18.54■□□□□ 0.56
HMGN1-210ENST00000464078 LIMS2Q7Z4I7 341 aa18.54■□□□□ 0.56
HMGN1-210ENST00000464078 OSTM1Q86WC4 334 aa18.54■□□□□ 0.56
HMGN1-210ENST00000464078 RASSF3Q86WH2 238 aa18.54■□□□□ 0.56
HMGN1-210ENST00000464078 SPATA2LQ8IUW3 424 aaPredicted RBP18.54■□□□□ 0.56
HMGN1-210ENST00000464078 ADGRF2Q8IZF7 708 aa18.54■□□□□ 0.56
HMGN1-210ENST00000464078 ABCA7Q8IZY2 2146 aa18.54■□□□□ 0.56
HMGN1-210ENST00000464078 KIAA1958Q8N8K9 716 aa18.54■□□□□ 0.56
HMGN1-210ENST00000464078 ACCSQ96QU6 501 aa18.54■□□□□ 0.56
HMGN1-210ENST00000464078 CYP2S1Q96SQ9 504 aa18.54■□□□□ 0.56
HMGN1-210ENST00000464078 MRPL44Q9H9J2 332 aaKnown RBP18.54■□□□□ 0.56
HMGN1-210ENST00000464078 RBAKQ9NYW8 714 aaPredicted RBP18.54■□□□□ 0.56
HMGN1-210ENST00000464078 AKAP13Q12802 2813 aa18.54■□□□□ 0.56
HMGN1-210ENST00000464078 DCLK1O15075 740 aa18.53■□□□□ 0.56
HMGN1-210ENST00000464078 NFATC1O95644 943 aa18.53■□□□□ 0.56
HMGN1-210ENST00000464078 PROS1P07225 676 aa18.53■□□□□ 0.56
HMGN1-210ENST00000464078 ALCAMQ13740 583 aa18.53■□□□□ 0.56
HMGN1-210ENST00000464078 KCNB1Q14721 858 aa18.53■□□□□ 0.56
HMGN1-210ENST00000464078 SF3A1Q15459 793 aaKnown RBP18.53■□□□□ 0.56
HMGN1-210ENST00000464078 FAM171BQ6P995 826 aa18.53■□□□□ 0.56
HMGN1-210ENST00000464078 DYMQ7RTS9 669 aa18.53■□□□□ 0.56
HMGN1-210ENST00000464078 ZSWIM2Q8NEG5 633 aa18.53■□□□□ 0.56
HMGN1-210ENST00000464078 TSTD1Q8NFU3 115 aa18.53■□□□□ 0.56
HMGN1-210ENST00000464078 SH3RF2Q8TEC5 729 aa18.53■□□□□ 0.56
HMGN1-210ENST00000464078 USP33Q8TEY7 942 aa18.53■□□□□ 0.56
HMGN1-210ENST00000464078 DNAJC19Q96DA6 116 aa18.53■□□□□ 0.56
HMGN1-210ENST00000464078 SAAL1Q96ER3 474 aa18.53■□□□□ 0.56
HMGN1-210ENST00000464078 CNOT6LQ96LI5 555 aaKnown RBP18.53■□□□□ 0.56
HMGN1-210ENST00000464078 SIX4Q9UIU6 781 aa18.53■□□□□ 0.56
HMGN1-210ENST00000464078 SNX9Q9Y5X1 595 aa18.53■□□□□ 0.56
HMGN1-210ENST00000464078 THADAQ6YHU6 1953 aa18.52■□□□□ 0.56
HMGN1-210ENST00000464078 C2orf78A6NCI8 922 aa18.52■□□□□ 0.56
HMGN1-210ENST00000464078 CD2BP2O95400 341 aaKnown RBP18.52■□□□□ 0.56
HMGN1-210ENST00000464078 OPRD1P41143 372 aa18.52■□□□□ 0.56
HMGN1-210ENST00000464078 NOVA1P51513 510 aaKnown RBP18.52■□□□□ 0.56
HMGN1-210ENST00000464078 RBP5P82980 135 aa18.52■□□□□ 0.56
HMGN1-210ENST00000464078 SOWAHAQ2M3V2 549 aa18.52■□□□□ 0.56
HMGN1-210ENST00000464078 USP39Q53GS9 565 aaKnown RBP18.52■□□□□ 0.56
HMGN1-210ENST00000464078 VSTM1Q6UX27 236 aa18.52■□□□□ 0.56
HMGN1-210ENST00000464078 C4orf50Q6ZRC1 276 aa18.52■□□□□ 0.56
HMGN1-210ENST00000464078 USP49Q70CQ1 688 aa18.52■□□□□ 0.56
HMGN1-210ENST00000464078 DPH6Q7L8W6 267 aa18.52■□□□□ 0.56
HMGN1-210ENST00000464078 CSGALNACT2Q8N6G5 542 aa18.52■□□□□ 0.56
HMGN1-210ENST00000464078 ARL14EPQ8N8R7 260 aaPredicted RBP18.52■□□□□ 0.56
HMGN1-210ENST00000464078 EPSTI1Q96J88 318 aa18.52■□□□□ 0.56
HMGN1-210ENST00000464078 SPATA17Q96L03 361 aa18.52■□□□□ 0.56
HMGN1-210ENST00000464078 CCDC39Q9UFE4 941 aa18.52■□□□□ 0.56
HMGN1-210ENST00000464078 SMC3Q9UQE7 1217 aa18.52■□□□□ 0.56
HMGN1-210ENST00000464078 PLXND1Q9Y4D7 1925 aa18.51■□□□□ 0.55
HMGN1-210ENST00000464078 BAHCC1Q9P281 2608 aa18.51■□□□□ 0.55
HMGN1-210ENST00000464078 FRMD3A2A2Y4 597 aa18.51■□□□□ 0.55
HMGN1-210ENST00000464078 MYMKA6NI61 221 aa18.51■□□□□ 0.55
HMGN1-210ENST00000464078 C4orf47A7E2U8 309 aa18.51■□□□□ 0.55
HMGN1-210ENST00000464078 HDCP19113 662 aa18.51■□□□□ 0.55
HMGN1-210ENST00000464078 GBP1P32455 592 aa18.51■□□□□ 0.55
HMGN1-210ENST00000464078 DGKEP52429 567 aa18.51■□□□□ 0.55
HMGN1-210ENST00000464078 PSMD2Q13200 908 aa18.51■□□□□ 0.55
HMGN1-210ENST00000464078 GAB4Q2WGN9 574 aa18.51■□□□□ 0.55
HMGN1-210ENST00000464078 DAB2IPQ5VWQ8 1189 aa18.51■□□□□ 0.55
HMGN1-210ENST00000464078 LARP1BQ659C4 914 aaKnown RBP18.51■□□□□ 0.55
HMGN1-210ENST00000464078 SCARA3Q6AZY7 606 aa18.51■□□□□ 0.55
HMGN1-210ENST00000464078 MTMR12Q9C0I1 747 aa18.51■□□□□ 0.55
HMGN1-210ENST00000464078 MMP17Q9ULZ9 603 aa18.51■□□□□ 0.55
HMGN1-210ENST00000464078 WASF3Q9UPY6 502 aa18.51■□□□□ 0.55
HMGN1-210ENST00000464078 PCDHB13Q9Y5F0 798 aa18.51■□□□□ 0.55
HMGN1-210ENST00000464078 SPEGQ15772 3267 aa18.51■□□□□ 0.55
HMGN1-210ENST00000464078 ASPMQ8IZT6 3477 aa18.5■□□□□ 0.55
HMGN1-210ENST00000464078 K7EQS6 105 aa18.5■□□□□ 0.55
HMGN1-210ENST00000464078 HCRTO43612 131 aa18.5■□□□□ 0.55
HMGN1-210ENST00000464078 GCNT3O95395 438 aa18.5■□□□□ 0.55
HMGN1-210ENST00000464078 CSRP1P21291 193 aaKnown RBP18.5■□□□□ 0.55
HMGN1-210ENST00000464078 CASP5P51878 434 aa18.5■□□□□ 0.55
HMGN1-210ENST00000464078 MAPRE1Q15691 268 aaKnown RBP18.5■□□□□ 0.55
HMGN1-210ENST00000464078 SCN4BQ8IWT1 228 aa18.5■□□□□ 0.55
HMGN1-210ENST00000464078 KBTBD7Q8WVZ9 684 aa18.5■□□□□ 0.55
HMGN1-210ENST00000464078 FAM84AQ96KN4 292 aa18.5■□□□□ 0.55
HMGN1-210ENST00000464078 SYT15Q9BQS2 421 aa18.5■□□□□ 0.55
HMGN1-210ENST00000464078 CBWD1Q9BRT8 395 aa18.5■□□□□ 0.55
HMGN1-210ENST00000464078 TTLL2Q9BWV7 592 aa18.5■□□□□ 0.55
HMGN1-210ENST00000464078 LINC00597Q9H2U6 94 aa18.5■□□□□ 0.55
HMGN1-210ENST00000464078 PDE11AQ9HCR9 933 aa18.5■□□□□ 0.55
HMGN1-210ENST00000464078 TMEM9BQ9NQ34 198 aa18.5■□□□□ 0.55
HMGN1-210ENST00000464078 CDH9Q9ULB4 789 aa18.5■□□□□ 0.55
HMGN1-210ENST00000464078 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.5■□□□□ 0.55
HMGN1-210ENST00000464078 TNRC6BQ9UPQ9 1833 aaKnown RBP18.5■□□□□ 0.55
HMGN1-210ENST00000464078 ASCC3Q8N3C0 2202 aaKnown RBP18.49■□□□□ 0.55
HMGN1-210ENST00000464078 KHNYNO15037 678 aaKnown RBP18.49■□□□□ 0.55
HMGN1-210ENST00000464078 KIAA0391O15091 583 aaKnown RBP18.49■□□□□ 0.55
HMGN1-210ENST00000464078 OLFM2O95897 454 aa18.49■□□□□ 0.55
HMGN1-210ENST00000464078 KRT19P08727 400 aa18.49■□□□□ 0.55
HMGN1-210ENST00000464078 TMEM191BP0C7N4 346 aa18.49■□□□□ 0.55
HMGN1-210ENST00000464078 CHRM1P11229 460 aaPredicted RBP18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms