RNA–Protein interactions for RNA: ENST00000464053.1

GYPC-205, Transcript of glycophorin C (Gerbich blood group), humanhuman

TSL 1 (best)

Gene GYPC, Length 1,805 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-205ENST00000464053 RHOBTB2Q9BYZ6 727 aa16.3■□□□□ 0.2
GYPC-205ENST00000464053 SNX12Q9UMY4 172 aa16.3■□□□□ 0.2
GYPC-205ENST00000464053 SAR1BQ9Y6B6 198 aa16.3■□□□□ 0.2
GYPC-205ENST00000464053 SCINQ9Y6U3 715 aa16.3■□□□□ 0.2
GYPC-205ENST00000464053 ARHGEF37A1IGU5 675 aa16.29■□□□□ 0.2
GYPC-205ENST00000464053 ZBBXA8MT70 800 aa16.29■□□□□ 0.2
GYPC-205ENST00000464053 ZNF185O15231 689 aa16.29■□□□□ 0.2
GYPC-205ENST00000464053 OAZ2O95190 189 aa16.29■□□□□ 0.2
GYPC-205ENST00000464053 FGBP02675 491 aa16.29■□□□□ 0.2
GYPC-205ENST00000464053 SETSIPP0DME0 302 aa16.29■□□□□ 0.2
GYPC-205ENST00000464053 CXCR5P32302 372 aa16.29■□□□□ 0.2
GYPC-205ENST00000464053 RABGGTBP53611 331 aa16.29■□□□□ 0.2
GYPC-205ENST00000464053 PLCB3Q01970 1234 aa16.29■□□□□ 0.2
GYPC-205ENST00000464053 FUT10Q6P4F1 479 aa16.29■□□□□ 0.2
GYPC-205ENST00000464053 FAM35AQ86V20 835 aa16.29■□□□□ 0.2
GYPC-205ENST00000464053 CEP57Q86XR8 500 aa16.29■□□□□ 0.2
GYPC-205ENST00000464053 FEZF2Q8TBJ5 459 aa16.29■□□□□ 0.2
GYPC-205ENST00000464053 MYLPFQ96A32 169 aa16.29■□□□□ 0.2
GYPC-205ENST00000464053 CALR3Q96L12 384 aaKnown RBP16.29■□□□□ 0.2
GYPC-205ENST00000464053 MRPL47Q9HD33 250 aaKnown RBP16.29■□□□□ 0.2
GYPC-205ENST00000464053 TMEM30AQ9NV96 361 aa16.29■□□□□ 0.2
GYPC-205ENST00000464053 CDC23Q9UJX2 597 aa16.29■□□□□ 0.2
GYPC-205ENST00000464053 STRIP2Q9ULQ0 834 aa16.29■□□□□ 0.2
GYPC-205ENST00000464053 NLRC5Q86WI3 1866 aa16.29■□□□□ 0.2
GYPC-205ENST00000464053 TMEM191CA6NGB0 347 aa16.29■□□□□ 0.2
GYPC-205ENST00000464053 SYN3O14994 580 aa16.29■□□□□ 0.2
GYPC-205ENST00000464053 OR4Q2P0C623 313 aa16.29■□□□□ 0.2
GYPC-205ENST00000464053 COMTP21964 271 aa16.29■□□□□ 0.2
GYPC-205ENST00000464053 CACNA2D1P54289 1103 aa16.29■□□□□ 0.2
GYPC-205ENST00000464053 GSCP56915 257 aaPredicted RBP16.29■□□□□ 0.2
GYPC-205ENST00000464053 ZNF268Q14587 947 aaPredicted RBP16.29■□□□□ 0.2
GYPC-205ENST00000464053 VARS2Q5ST30 1063 aaKnown RBP16.29■□□□□ 0.2
GYPC-205ENST00000464053 CLEC20AQ6ZU45 233 aa16.29■□□□□ 0.2
GYPC-205ENST00000464053 FAM183BPQ6ZVS7 135 aa16.29■□□□□ 0.2
GYPC-205ENST00000464053 TMEM110Q86TL2 294 aa16.29■□□□□ 0.2
GYPC-205ENST00000464053 MSANTD4Q8NCY6 345 aa16.29■□□□□ 0.2
GYPC-205ENST00000464053 JOSD2Q8TAC2 188 aa16.29■□□□□ 0.2
GYPC-205ENST00000464053 STK32AQ8WU08 396 aa16.29■□□□□ 0.2
GYPC-205ENST00000464053 MCRS1Q96EZ8 462 aa16.29■□□□□ 0.2
GYPC-205ENST00000464053 PIWIL1Q96J94 861 aaKnown RBP16.29■□□□□ 0.2
GYPC-205ENST00000464053 MCEEQ96PE7 176 aa16.29■□□□□ 0.2
GYPC-205ENST00000464053 OSBPL9Q96SU4 736 aa16.29■□□□□ 0.2
GYPC-205ENST00000464053 KRT82Q9NSB4 513 aa16.29■□□□□ 0.2
GYPC-205ENST00000464053 CXXC1Q9P0U4 656 aaPredicted RBP16.29■□□□□ 0.2
GYPC-205ENST00000464053 AMFRQ9UKV5 643 aa16.29■□□□□ 0.2
GYPC-205ENST00000464053 ZMYND8Q9ULU4 1186 aaPredicted RBP16.29■□□□□ 0.2
GYPC-205ENST00000464053 SF3B1O75533 1304 aaKnown RBP eCLIP16.28■□□□□ 0.29e-6■■■■■ 68.9
GYPC-205ENST00000464053 NPR3P17342 541 aa16.28■□□□□ 0.2
GYPC-205ENST00000464053 FGFR3P22607 806 aa16.28■□□□□ 0.2
GYPC-205ENST00000464053 PLA2G4AP47712 749 aa16.28■□□□□ 0.2
GYPC-205ENST00000464053 RPL34P49207 117 aaKnown RBP16.28■□□□□ 0.2
GYPC-205ENST00000464053 ALDH7A1P49419 539 aaKnown RBP16.28■□□□□ 0.2
GYPC-205ENST00000464053 OGDHQ02218 1023 aa16.28■□□□□ 0.2
GYPC-205ENST00000464053 RPS6KA1Q15418 735 aa16.28■□□□□ 0.2
GYPC-205ENST00000464053 TMEM240Q5SV17 173 aa16.28■□□□□ 0.2
GYPC-205ENST00000464053 DAB2IPQ5VWQ8 1189 aa16.28■□□□□ 0.2
GYPC-205ENST00000464053 SCUBE3Q8IX30 993 aa16.28■□□□□ 0.2
GYPC-205ENST00000464053 LRRN4CLQ8ND94 238 aa16.28■□□□□ 0.2
GYPC-205ENST00000464053 IPO4Q8TEX9 1081 aaKnown RBP16.28■□□□□ 0.2
GYPC-205ENST00000464053 COG1Q8WTW3 980 aa16.28■□□□□ 0.2
GYPC-205ENST00000464053 HES6Q96HZ4 224 aa16.28■□□□□ 0.2
GYPC-205ENST00000464053 SMOQ99835 787 aa16.28■□□□□ 0.2
GYPC-205ENST00000464053 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.28■□□□□ 0.2
GYPC-205ENST00000464053 SELENOOQ9BVL4 669 aa16.28■□□□□ 0.2
GYPC-205ENST00000464053 VN1R3Q9BXE9 311 aa16.28■□□□□ 0.2
GYPC-205ENST00000464053 MRPL42Q9Y6G3 142 aaKnown RBP16.28■□□□□ 0.2
GYPC-205ENST00000464053 PTPRDP23468 1912 aa16.27■□□□□ 0.2
GYPC-205ENST00000464053 SIGLEC16A6NMB1 481 aa16.27■□□□□ 0.2
GYPC-205ENST00000464053 MYO1FO00160 1098 aa16.27■□□□□ 0.2
GYPC-205ENST00000464053 XPO1O14980 1071 aaKnown RBP16.27■□□□□ 0.2
GYPC-205ENST00000464053 PAPSS1O43252 624 aaPredicted RBP16.27■□□□□ 0.2
GYPC-205ENST00000464053 EFEMP2O95967 443 aa16.27■□□□□ 0.2
GYPC-205ENST00000464053 FAM200BP0CF97 657 aa16.27■□□□□ 0.2
GYPC-205ENST00000464053 RFC1P35251 1148 aaPredicted RBP16.27■□□□□ 0.2
GYPC-205ENST00000464053 MAP3K7CLP57077 242 aa16.27■□□□□ 0.2
GYPC-205ENST00000464053 TSPY1Q01534 308 aa16.27■□□□□ 0.2
GYPC-205ENST00000464053 ZNF252P-AS1Q0IIN9 211 aa16.27■□□□□ 0.2
GYPC-205ENST00000464053 MRPL58Q14197 206 aaKnown RBP16.27■□□□□ 0.2
GYPC-205ENST00000464053 BTG3Q14201 252 aaPredicted RBP16.27■□□□□ 0.2
GYPC-205ENST00000464053 RTP2Q5QGT7 225 aa16.27■□□□□ 0.2
GYPC-205ENST00000464053 OR6B2Q6IFH4 312 aa16.27■□□□□ 0.2
GYPC-205ENST00000464053 DCUN1D2Q6PH85 259 aa16.27■□□□□ 0.2
GYPC-205ENST00000464053 PIGZQ86VD9 579 aa16.27■□□□□ 0.2
GYPC-205ENST00000464053 ZMIZ2Q8NF64 920 aa16.27■□□□□ 0.2
GYPC-205ENST00000464053 CLEC4CQ8WTT0 213 aa16.27■□□□□ 0.2
GYPC-205ENST00000464053 CAPZA3Q96KX2 299 aa16.27■□□□□ 0.2
GYPC-205ENST00000464053 KCNK16Q96T55 309 aa16.27■□□□□ 0.2
GYPC-205ENST00000464053 METTL5Q9NRN9 209 aaKnown RBP16.27■□□□□ 0.2
GYPC-205ENST00000464053 WDR35Q9P2L0 1181 aa16.27■□□□□ 0.2
GYPC-205ENST00000464053 KIAA1671Q9BY89 1806 aa16.27■□□□□ 0.19
GYPC-205ENST00000464053 AP1G2O75843 785 aa16.26■□□□□ 0.19
GYPC-205ENST00000464053 KRT3P12035 628 aa16.26■□□□□ 0.19
GYPC-205ENST00000464053 LCP1P13796 627 aa16.26■□□□□ 0.19
GYPC-205ENST00000464053 PRLRP16471 622 aa16.26■□□□□ 0.19
GYPC-205ENST00000464053 TAF5Q15542 800 aa16.26■□□□□ 0.19
GYPC-205ENST00000464053 SPOUT1Q5T280 376 aaKnown RBP16.26■□□□□ 0.19
GYPC-205ENST00000464053 KCNT2Q6UVM3 1135 aa16.26■□□□□ 0.19
GYPC-205ENST00000464053 OLFML1Q6UWY5 402 aa16.26■□□□□ 0.19
GYPC-205ENST00000464053 CMTR2Q8IYT2 770 aaKnown RBP16.26■□□□□ 0.19
GYPC-205ENST00000464053 EMC1Q8N766 993 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms