RNA–Protein interactions for RNA: ENST00000464001.1

ITGB1-208, Transcript of integrin subunit beta 1, humanhuman

TSL 2

Gene ITGB1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-208ENST00000464001 CATSPERGQ6ZRH7 1159 aa5.22□□□□□ -1.57
ITGB1-208ENST00000464001 NOL8Q76FK4 1167 aaKnown RBP5.22□□□□□ -1.57
ITGB1-208ENST00000464001 GRAMD1CQ8IYS0 662 aa5.22□□□□□ -1.57
ITGB1-208ENST00000464001 PNLDC1Q8NA58 520 aaKnown RBP5.22□□□□□ -1.57
ITGB1-208ENST00000464001 ABHD11Q8NFV4 315 aa5.22□□□□□ -1.57
ITGB1-208ENST00000464001 UBE2Q2Q8WVN8 375 aa5.22□□□□□ -1.57
ITGB1-208ENST00000464001 R3HDM4Q96D70 268 aa5.22□□□□□ -1.57
ITGB1-208ENST00000464001 DAZAP1Q96EP5 407 aaKnown RBP5.22□□□□□ -1.57
ITGB1-208ENST00000464001 ASB2Q96Q27 587 aa5.22□□□□□ -1.57
ITGB1-208ENST00000464001 BRINP2Q9C0B6 783 aa5.22□□□□□ -1.57
ITGB1-208ENST00000464001 ARMT1Q9H993 441 aa5.22□□□□□ -1.57
ITGB1-208ENST00000464001 IP6K2Q9UHH9 426 aa5.22□□□□□ -1.57
ITGB1-208ENST00000464001 CPA4Q9UI42 421 aa5.22□□□□□ -1.57
ITGB1-208ENST00000464001 TBC1D30Q9Y2I9 924 aa5.22□□□□□ -1.57
ITGB1-208ENST00000464001 MED16Q9Y2X0 877 aa5.22□□□□□ -1.57
ITGB1-208ENST00000464001 ERC2O15083 957 aa5.21□□□□□ -1.58
ITGB1-208ENST00000464001 OFD1O75665 1012 aa5.21□□□□□ -1.58
ITGB1-208ENST00000464001 TJP3O95049 919 aa5.21□□□□□ -1.58
ITGB1-208ENST00000464001 CT47B1P0C2W7 299 aaPredicted RBP5.21□□□□□ -1.58
ITGB1-208ENST00000464001 PF4V1P10720 104 aa5.21□□□□□ -1.58
ITGB1-208ENST00000464001 IBSPP21815 317 aaPredicted RBP5.21□□□□□ -1.58
ITGB1-208ENST00000464001 CTGFP29279 349 aa5.21□□□□□ -1.58
ITGB1-208ENST00000464001 PDE6CP51160 858 aa5.21□□□□□ -1.58
ITGB1-208ENST00000464001 UCP3P55916 312 aa5.21□□□□□ -1.58
ITGB1-208ENST00000464001 GPSM2P81274 684 aa5.21□□□□□ -1.58
ITGB1-208ENST00000464001 PTPROQ16827 1216 aa5.21□□□□□ -1.58
ITGB1-208ENST00000464001 SUPT20HL1Q3ZLR7 823 aa5.21□□□□□ -1.58
ITGB1-208ENST00000464001 Q6ZWC4 215 aa5.21□□□□□ -1.58
ITGB1-208ENST00000464001 CHSY1Q86X52 802 aa5.21□□□□□ -1.58
ITGB1-208ENST00000464001 C9orf106Q8NAJ2 232 aa5.21□□□□□ -1.58
ITGB1-208ENST00000464001 CYP2W1Q8TAV3 490 aa5.21□□□□□ -1.58
ITGB1-208ENST00000464001 SH2D3AQ9BRG2 576 aa5.21□□□□□ -1.58
ITGB1-208ENST00000464001 PIH1D1Q9NWS0 290 aaKnown RBP5.21□□□□□ -1.58
ITGB1-208ENST00000464001 ZNF521Q96K83 1311 aa5.21□□□□□ -1.58
ITGB1-208ENST00000464001 H7C1Q1 480 aa5.2□□□□□ -1.58
ITGB1-208ENST00000464001 hCG_1984214I3L0E3 225 aa5.2□□□□□ -1.58
ITGB1-208ENST00000464001 ADAMTS3O15072 1205 aa5.2□□□□□ -1.58
ITGB1-208ENST00000464001 MOSPD3O75425 235 aa5.2□□□□□ -1.58
ITGB1-208ENST00000464001 PRKCBP05771 671 aa5.2□□□□□ -1.58
ITGB1-208ENST00000464001 IGKV2-30P06310 120 aa5.2□□□□□ -1.58
ITGB1-208ENST00000464001 WNT3P56703 355 aa5.2□□□□□ -1.58
ITGB1-208ENST00000464001 MAPK7Q13164 816 aa5.2□□□□□ -1.58
ITGB1-208ENST00000464001 MGAT5BQ3V5L5 792 aa5.2□□□□□ -1.58
ITGB1-208ENST00000464001 IFIT1BQ5T764 474 aaKnown RBP5.2□□□□□ -1.58
ITGB1-208ENST00000464001 BHLHA9Q7RTU4 235 aa5.2□□□□□ -1.58
ITGB1-208ENST00000464001 SLC15A3Q8IY34 581 aa5.2□□□□□ -1.58
ITGB1-208ENST00000464001 GALNT16Q8N428 558 aa5.2□□□□□ -1.58
ITGB1-208ENST00000464001 CELF5Q8N6W0 485 aaKnown RBP5.2□□□□□ -1.58
ITGB1-208ENST00000464001 OSCP1Q8WVF1 389 aa5.2□□□□□ -1.58
ITGB1-208ENST00000464001 SOCS4Q8WXH5 440 aa5.2□□□□□ -1.58
ITGB1-208ENST00000464001 MACROD1Q9BQ69 325 aa5.2□□□□□ -1.58
ITGB1-208ENST00000464001 DPCDQ9BVM2 203 aaPredicted RBP5.2□□□□□ -1.58
ITGB1-208ENST00000464001 TRMT13Q9NUP7 481 aaKnown RBP5.2□□□□□ -1.58
ITGB1-208ENST00000464001 MRPS17Q9Y2R5 130 aaKnown RBP5.2□□□□□ -1.58
ITGB1-208ENST00000464001 A0A088AWK7 358 aa5.19□□□□□ -1.58
ITGB1-208ENST00000464001 POC1B-GALNT4F8VUJ3 575 aa5.19□□□□□ -1.58
ITGB1-208ENST00000464001 MMP13P45452 471 aa5.19□□□□□ -1.58
ITGB1-208ENST00000464001 SLC11A2P49281 568 aa5.19□□□□□ -1.58
ITGB1-208ENST00000464001 KRT17Q04695 432 aa5.19□□□□□ -1.58
ITGB1-208ENST00000464001 MYO1EQ12965 1108 aa5.19□□□□□ -1.58
ITGB1-208ENST00000464001 CERKLQ49MI3 558 aaPredicted RBP5.19□□□□□ -1.58
ITGB1-208ENST00000464001 DEPDC1Q5TB30 811 aa5.19□□□□□ -1.58
ITGB1-208ENST00000464001 MIS18BP1Q6P0N0 1132 aa5.19□□□□□ -1.58
ITGB1-208ENST00000464001 TMED8Q6PL24 325 aaPredicted RBP5.19□□□□□ -1.58
ITGB1-208ENST00000464001 GALNT4Q8N4A0 578 aa5.19□□□□□ -1.58
ITGB1-208ENST00000464001 C8orf58Q8NAV2 365 aa5.19□□□□□ -1.58
ITGB1-208ENST00000464001 PLBD2Q8NHP8 589 aa5.19□□□□□ -1.58
ITGB1-208ENST00000464001 HOOK2Q96ED9 719 aa5.19□□□□□ -1.58
ITGB1-208ENST00000464001 MRGPRX1Q96LB2 322 aa5.19□□□□□ -1.58
ITGB1-208ENST00000464001 C5orf34Q96MH7 638 aa5.19□□□□□ -1.58
ITGB1-208ENST00000464001 MESP1Q9BRJ9 268 aa5.19□□□□□ -1.58
ITGB1-208ENST00000464001 PRSS22Q9GZN4 317 aa5.19□□□□□ -1.58
ITGB1-208ENST00000464001 GABRQQ9UN88 632 aa5.19□□□□□ -1.58
ITGB1-208ENST00000464001 CYP2D7A0A087X1C5 515 aa5.18□□□□□ -1.58
ITGB1-208ENST00000464001 SMIM35A0A1B0GVV1 85 aa5.18□□□□□ -1.58
ITGB1-208ENST00000464001 CSF1RP07333 972 aa5.18□□□□□ -1.58
ITGB1-208ENST00000464001 RAB1AP62820 205 aa5.18□□□□□ -1.58
ITGB1-208ENST00000464001 LMBRD2Q68DH5 695 aaPredicted RBP5.18□□□□□ -1.58
ITGB1-208ENST00000464001 SLC2A7Q6PXP3 512 aa5.18□□□□□ -1.58
ITGB1-208ENST00000464001 ZNF280BQ86YH2 543 aa5.18□□□□□ -1.58
ITGB1-208ENST00000464001 CNGA4Q8IV77 575 aa5.18□□□□□ -1.58
ITGB1-208ENST00000464001 DNAJC5GQ8N7S2 189 aa5.18□□□□□ -1.58
ITGB1-208ENST00000464001 TERB1Q8NA31 727 aa5.18□□□□□ -1.58
ITGB1-208ENST00000464001 ZBTB9Q96C00 473 aa5.18□□□□□ -1.58
ITGB1-208ENST00000464001 SNX18Q96RF0 628 aa5.18□□□□□ -1.58
ITGB1-208ENST00000464001 PSMD1Q99460 953 aa5.18□□□□□ -1.58
ITGB1-208ENST00000464001 THAP7Q9BT49 309 aaPredicted RBP5.18□□□□□ -1.58
ITGB1-208ENST00000464001 CXorf36Q9H7Y0 433 aa5.18□□□□□ -1.58
ITGB1-208ENST00000464001 TUBA8Q9NY65 449 aaPredicted RBP5.18□□□□□ -1.58
ITGB1-208ENST00000464001 TFCP2L1Q9NZI6 479 aa5.18□□□□□ -1.58
ITGB1-208ENST00000464001 PNMA8BQ9ULN7 279 aaPredicted RBP5.18□□□□□ -1.58
ITGB1-208ENST00000464001 KCNU1A8MYU2 1149 aa5.17□□□□□ -1.58
ITGB1-208ENST00000464001 UBE2Q2LH0YL09 131 aa5.17□□□□□ -1.58
ITGB1-208ENST00000464001 PPEF2O14830 753 aa5.17□□□□□ -1.58
ITGB1-208ENST00000464001 AP1G1O43747 822 aa5.17□□□□□ -1.58
ITGB1-208ENST00000464001 EXOC3O60645 756 aa5.17□□□□□ -1.58
ITGB1-208ENST00000464001 ABLIM3O94929 683 aa5.17□□□□□ -1.58
ITGB1-208ENST00000464001 PDE8BO95263 885 aa5.17□□□□□ -1.58
ITGB1-208ENST00000464001 CHRM5P08912 532 aaPredicted RBP5.17□□□□□ -1.58
ITGB1-208ENST00000464001 PLCD1P51178 756 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms