RNA–Protein interactions for RNA: ENST00000463486.5

VPS52-214, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-214ENST00000463486 NXPE3Q969Y0 559 aa18.81■□□□□ 0.6
VPS52-214ENST00000463486 NT5C1AQ9BXI3 368 aa18.81■□□□□ 0.6
VPS52-214ENST00000463486 NUMBLQ9Y6R0 609 aa18.81■□□□□ 0.6
VPS52-214ENST00000463486 GREB1Q4ZG55 1949 aa18.8■□□□□ 0.6
VPS52-214ENST00000463486 TNFRSF10BO14763 440 aa18.8■□□□□ 0.6
VPS52-214ENST00000463486 TADA3O75528 432 aa18.8■□□□□ 0.6
VPS52-214ENST00000463486 BEST1O76090 585 aa18.8■□□□□ 0.6
VPS52-214ENST00000463486 CLSTN1O94985 981 aa18.8■□□□□ 0.6
VPS52-214ENST00000463486 CSH1P0DML2 217 aa18.8■□□□□ 0.6
VPS52-214ENST00000463486 CSH2P0DML3 217 aa18.8■□□□□ 0.6
VPS52-214ENST00000463486 CCDC130P13994 396 aa18.8■□□□□ 0.6
VPS52-214ENST00000463486 TDGQ13569 410 aa18.8■□□□□ 0.6
VPS52-214ENST00000463486 KLHL40Q2TBA0 621 aa18.8■□□□□ 0.6
VPS52-214ENST00000463486 CDKAL1Q5VV42 579 aa18.8■□□□□ 0.6
VPS52-214ENST00000463486 PHLDB3Q6NSJ2 640 aa18.8■□□□□ 0.6
VPS52-214ENST00000463486 DPY19L2P1Q6NXN4 242 aa18.8■□□□□ 0.6
VPS52-214ENST00000463486 CAVIN1Q6NZI2 390 aaKnown RBP18.8■□□□□ 0.6
VPS52-214ENST00000463486 SASS6Q6UVJ0 657 aa18.8■□□□□ 0.6
VPS52-214ENST00000463486 ARHGEF19Q8IW93 802 aa18.8■□□□□ 0.6
VPS52-214ENST00000463486 ZMIZ2Q8NF64 920 aa18.8■□□□□ 0.6
VPS52-214ENST00000463486 SLC2A14Q8TDB8 520 aa18.8■□□□□ 0.6
VPS52-214ENST00000463486 KAT5Q92993 513 aa18.8■□□□□ 0.6
VPS52-214ENST00000463486 ASB16Q96NS5 453 aa18.8■□□□□ 0.6
VPS52-214ENST00000463486 KCNK16Q96T55 309 aa18.8■□□□□ 0.6
VPS52-214ENST00000463486 HNRNPABQ99729 332 aaKnown RBP18.8■□□□□ 0.6
VPS52-214ENST00000463486 SMOQ99835 787 aa18.8■□□□□ 0.6
VPS52-214ENST00000463486 TRPV4Q9HBA0 871 aa18.8■□□□□ 0.6
VPS52-214ENST00000463486 CSNK1G1Q9HCP0 422 aa18.8■□□□□ 0.6
VPS52-214ENST00000463486 ANO10Q9NW15 660 aa18.8■□□□□ 0.6
VPS52-214ENST00000463486 NFE2L3Q9Y4A8 694 aa18.8■□□□□ 0.6
VPS52-214ENST00000463486 GRIK1P39086 918 aa18.79■□□□□ 0.6
VPS52-214ENST00000463486 TYRO3Q06418 890 aa18.79■□□□□ 0.6
VPS52-214ENST00000463486 NCAPHQ15003 741 aa18.79■□□□□ 0.6
VPS52-214ENST00000463486 STX1AQ16623 288 aa18.79■□□□□ 0.6
VPS52-214ENST00000463486 HSP90AA4PQ58FG1 418 aa18.79■□□□□ 0.6
VPS52-214ENST00000463486 TANGO2Q6ICL3 276 aa18.79■□□□□ 0.6
VPS52-214ENST00000463486 TTC39CQ8N584 583 aa18.79■□□□□ 0.6
VPS52-214ENST00000463486 KREMEN1Q96MU8 473 aa18.79■□□□□ 0.6
VPS52-214ENST00000463486 FUCA2Q9BTY2 467 aa18.79■□□□□ 0.6
VPS52-214ENST00000463486 TTLL2Q9BWV7 592 aa18.79■□□□□ 0.6
VPS52-214ENST00000463486 PLA2G2FQ9BZM2 168 aa18.79■□□□□ 0.6
VPS52-214ENST00000463486 INTS2Q9H0H0 1204 aaKnown RBP18.79■□□□□ 0.6
VPS52-214ENST00000463486 HSD3B7Q9H2F3 369 aa18.79■□□□□ 0.6
VPS52-214ENST00000463486 FAM49BQ9NUQ9 324 aa18.79■□□□□ 0.6
VPS52-214ENST00000463486 IL37Q9NZH6 218 aa18.79■□□□□ 0.6
VPS52-214ENST00000463486 NCANO14594 1321 aa18.78■□□□□ 0.6
VPS52-214ENST00000463486 TRIM66O15016 1216 aa18.78■□□□□ 0.6
VPS52-214ENST00000463486 NARSO43776 548 aaKnown RBP18.78■□□□□ 0.6
VPS52-214ENST00000463486 FGF19O95750 216 aa18.78■□□□□ 0.6
VPS52-214ENST00000463486 WEE1P30291 646 aa18.78■□□□□ 0.6
VPS52-214ENST00000463486 CYP4F8P98187 520 aa18.78■□□□□ 0.6
VPS52-214ENST00000463486 GCNT1Q02742 428 aa18.78■□□□□ 0.6
VPS52-214ENST00000463486 TPD52L1Q16890 204 aaPredicted RBP18.78■□□□□ 0.6
VPS52-214ENST00000463486 ZNF394Q53GI3 561 aa18.78■□□□□ 0.6
VPS52-214ENST00000463486 TRIM67Q6ZTA4 783 aa18.78■□□□□ 0.6
VPS52-214ENST00000463486 UBALD2Q8IYN6 164 aa18.78■□□□□ 0.6
VPS52-214ENST00000463486 RSPRY1Q96DX4 576 aa18.78■□□□□ 0.6
VPS52-214ENST00000463486 CYFIP2Q96F07 1278 aa18.78■□□□□ 0.6
VPS52-214ENST00000463486 ASIC4Q96FT7 647 aa18.78■□□□□ 0.6
VPS52-214ENST00000463486 TMEM176AQ96HP8 235 aa18.78■□□□□ 0.6
VPS52-214ENST00000463486 NT5C1BQ96P26 610 aa18.78■□□□□ 0.6
VPS52-214ENST00000463486 CRACR2AQ9BSW2 395 aa18.78■□□□□ 0.6
VPS52-214ENST00000463486 SLC46A2Q9BY10 475 aa18.78■□□□□ 0.6
VPS52-214ENST00000463486 GPR88Q9GZN0 384 aa18.78■□□□□ 0.6
VPS52-214ENST00000463486 ATXN3LQ9H3M9 355 aa18.78■□□□□ 0.6
VPS52-214ENST00000463486 GTPBP10A4D1E9 387 aaKnown RBP18.77■□□□□ 0.6
VPS52-214ENST00000463486 KCNJ18B7U540 433 aa18.77■□□□□ 0.6
VPS52-214ENST00000463486 HHLA1C9JL84 531 aa18.77■□□□□ 0.6
VPS52-214ENST00000463486 RNF225M0QZC1 329 aaPredicted RBP18.77■□□□□ 0.6
VPS52-214ENST00000463486 GPR37L1O60883 481 aa18.77■□□□□ 0.6
VPS52-214ENST00000463486 ECI2O75521 394 aa18.77■□□□□ 0.6
VPS52-214ENST00000463486 SLC9A1P19634 815 aa18.77■□□□□ 0.6
VPS52-214ENST00000463486 TBXAS1P24557 533 aaPredicted RBP18.77■□□□□ 0.6
VPS52-214ENST00000463486 CDC25CP30307 473 aa18.77■□□□□ 0.6
VPS52-214ENST00000463486 MTIF2P46199 727 aaKnown RBP18.77■□□□□ 0.6
VPS52-214ENST00000463486 APBA1Q02410 837 aa18.77■□□□□ 0.6
VPS52-214ENST00000463486 CETN1Q12798 172 aa18.77■□□□□ 0.6
VPS52-214ENST00000463486 KCNJ12Q14500 433 aa18.77■□□□□ 0.6
VPS52-214ENST00000463486 MAN2A1Q16706 1144 aa18.77■□□□□ 0.6
VPS52-214ENST00000463486 TCP11X2Q5H9J9 407 aa18.77■□□□□ 0.6
VPS52-214ENST00000463486 PPP1R26Q5T8A7 1209 aaPredicted RBP18.77■□□□□ 0.6
VPS52-214ENST00000463486 DENND5BQ6ZUT9 1274 aa18.77■□□□□ 0.6
VPS52-214ENST00000463486 MTSS1LQ765P7 747 aa18.77■□□□□ 0.6
VPS52-214ENST00000463486 RRAGAQ7L523 313 aa18.77■□□□□ 0.6
VPS52-214ENST00000463486 CREBRFQ8IUR6 639 aa18.77■□□□□ 0.6
VPS52-214ENST00000463486 FAM114A1Q8IWE2 563 aa18.77■□□□□ 0.6
VPS52-214ENST00000463486 ZSCAN18Q8TBC5 510 aaPredicted RBP18.77■□□□□ 0.6
VPS52-214ENST00000463486 SMARCD2Q92925 531 aa18.77■□□□□ 0.6
VPS52-214ENST00000463486 SMARCD1Q96GM5 515 aa18.77■□□□□ 0.6
VPS52-214ENST00000463486 LRRC3BQ96PB8 259 aa18.77■□□□□ 0.6
VPS52-214ENST00000463486 TUBGCP2Q9BSJ2 902 aa18.77■□□□□ 0.6
VPS52-214ENST00000463486 NDST4Q9H3R1 872 aa18.77■□□□□ 0.6
VPS52-214ENST00000463486 FANCLQ9NW38 375 aa18.77■□□□□ 0.6
VPS52-214ENST00000463486 MAGED2Q9UNF1 606 aaPredicted RBP18.77■□□□□ 0.6
VPS52-214ENST00000463486 DUSP12Q9UNI6 340 aa18.77■□□□□ 0.6
VPS52-214ENST00000463486 CNTN6Q9UQ52 1028 aa18.77■□□□□ 0.6
VPS52-214ENST00000463486 DENND4CQ5VZ89 1909 aa18.76■□□□□ 0.59
VPS52-214ENST00000463486 FAM92AA1XBS5 289 aa18.76■□□□□ 0.59
VPS52-214ENST00000463486 AP1G2O75843 785 aa18.76■□□□□ 0.59
VPS52-214ENST00000463486 EEF1GP26641 437 aaKnown RBP18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms