RNA–Protein interactions for RNA: ENST00000462604.1

COL8A1-204, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 190 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-204ENST00000462604 CDC25CP30307 473 aa3.68□□□□□ -1.82
COL8A1-204ENST00000462604 SSTR3P32745 418 aaPredicted RBP3.68□□□□□ -1.82
COL8A1-204ENST00000462604 RPL22P35268 128 aaKnown RBP3.68□□□□□ -1.82
COL8A1-204ENST00000462604 RFC5P40937 340 aa3.68□□□□□ -1.82
COL8A1-204ENST00000462604 NAMPTP43490 491 aa3.68□□□□□ -1.82
COL8A1-204ENST00000462604 SERPINB4P48594 390 aa3.68□□□□□ -1.82
COL8A1-204ENST00000462604 ACOT2P49753 483 aa3.68□□□□□ -1.82
COL8A1-204ENST00000462604 PAPOLAP51003 745 aaKnown RBP3.68□□□□□ -1.82
COL8A1-204ENST00000462604 RAP1GDS1P52306 607 aa3.68□□□□□ -1.82
COL8A1-204ENST00000462604 ZNF132P52740 706 aa3.68□□□□□ -1.82
COL8A1-204ENST00000462604 SH3BGRP55822 239 aaPredicted RBP3.68□□□□□ -1.82
COL8A1-204ENST00000462604 SOX10P56693 466 aa3.68□□□□□ -1.82
COL8A1-204ENST00000462604 NLRP11P59045 1033 aaKnown RBP3.68□□□□□ -1.82
COL8A1-204ENST00000462604 EIF3EP60228 445 aaKnown RBP3.68□□□□□ -1.82
COL8A1-204ENST00000462604 RPS6P62753 249 aaKnown RBP3.68□□□□□ -1.82
COL8A1-204ENST00000462604 AP2B1P63010 937 aa3.68□□□□□ -1.82
COL8A1-204ENST00000462604 BASP1P80723 227 aaKnown RBP3.68□□□□□ -1.82
COL8A1-204ENST00000462604 OTUD4Q01804 1114 aaKnown RBP3.68□□□□□ -1.82
COL8A1-204ENST00000462604 ROR2Q01974 943 aaKnown RBP3.68□□□□□ -1.82
COL8A1-204ENST00000462604 CDK18Q07002 472 aa3.68□□□□□ -1.82
COL8A1-204ENST00000462604 OVGP1Q12889 678 aa3.68□□□□□ -1.82
COL8A1-204ENST00000462604 DYNC1I2Q13409 638 aaKnown RBP3.68□□□□□ -1.82
COL8A1-204ENST00000462604 TRPC3Q13507 836 aa3.68□□□□□ -1.82
COL8A1-204ENST00000462604 RCN2Q14257 317 aa3.68□□□□□ -1.82
COL8A1-204ENST00000462604 KPNB1Q14974 876 aaKnown RBP3.68□□□□□ -1.82
COL8A1-204ENST00000462604 GSTA3Q16772 222 aa3.68□□□□□ -1.82
COL8A1-204ENST00000462604 CTC1Q2NKJ3 1217 aa3.68□□□□□ -1.82
COL8A1-204ENST00000462604 TRMT5Q32P41 509 aaKnown RBP3.68□□□□□ -1.82
COL8A1-204ENST00000462604 GNPTABQ3T906 1256 aa3.68□□□□□ -1.82
COL8A1-204ENST00000462604 SUPT20HL1Q3ZLR7 823 aa3.68□□□□□ -1.82
COL8A1-204ENST00000462604 MTERF2Q49AM1 385 aa3.68□□□□□ -1.82
COL8A1-204ENST00000462604 DNAL1Q4LDG9 190 aa3.68□□□□□ -1.82
COL8A1-204ENST00000462604 ATP13A4Q4VNC1 1196 aa3.68□□□□□ -1.82
COL8A1-204ENST00000462604 C2CD6Q53TS8 623 aa3.68□□□□□ -1.82
COL8A1-204ENST00000462604 XKR3Q5GH77 459 aa3.68□□□□□ -1.82
COL8A1-204ENST00000462604 FAM47CQ5HY64 1035 aa3.68□□□□□ -1.82
COL8A1-204ENST00000462604 HP1BP3Q5SSJ5 553 aaPredicted RBP3.68□□□□□ -1.82
COL8A1-204ENST00000462604 FNBP1LQ5T0N5 605 aa3.68□□□□□ -1.82
COL8A1-204ENST00000462604 LGSNQ5TDP6 509 aa3.68□□□□□ -1.82
COL8A1-204ENST00000462604 TTC39BQ5VTQ0 682 aaPredicted RBP3.68□□□□□ -1.82
COL8A1-204ENST00000462604 SNX30Q5VWJ9 437 aa3.68□□□□□ -1.82
COL8A1-204ENST00000462604 ANKRD22Q5VYY1 191 aa3.68□□□□□ -1.82
COL8A1-204ENST00000462604 CWF19L1Q69YN2 538 aaKnown RBP3.68□□□□□ -1.82
COL8A1-204ENST00000462604 SPOPLQ6IQ16 392 aa3.68□□□□□ -1.82
COL8A1-204ENST00000462604 ANO7Q6IWH7 933 aa3.68□□□□□ -1.82
COL8A1-204ENST00000462604 GPAT2Q6NUI2 795 aa3.68□□□□□ -1.82
COL8A1-204ENST00000462604 SWSAP1Q6NVH7 229 aa3.68□□□□□ -1.82
COL8A1-204ENST00000462604 RSBN1LQ6PCB5 846 aaPredicted RBP3.68□□□□□ -1.82
COL8A1-204ENST00000462604 RFWD3Q6PCD5 774 aa3.68□□□□□ -1.82
COL8A1-204ENST00000462604 LRRC74BQ6ZQY2 392 aa3.68□□□□□ -1.82
COL8A1-204ENST00000462604 C3orf62Q6ZUJ4 267 aa3.68□□□□□ -1.82
COL8A1-204ENST00000462604 BBS12Q6ZW61 710 aa3.68□□□□□ -1.82
COL8A1-204ENST00000462604 TRMT1LQ7Z2T5 733 aaKnown RBP3.68□□□□□ -1.82
COL8A1-204ENST00000462604 NET1Q7Z628 596 aaPredicted RBP3.68□□□□□ -1.82
COL8A1-204ENST00000462604 FAM83AQ86UY5 434 aa3.68□□□□□ -1.82
COL8A1-204ENST00000462604 SLC26A11Q86WA9 606 aa3.68□□□□□ -1.82
COL8A1-204ENST00000462604 WDR49Q8IV35 697 aa3.68□□□□□ -1.82
COL8A1-204ENST00000462604 BRSK2Q8IWQ3 736 aa3.68□□□□□ -1.82
COL8A1-204ENST00000462604 SCYL3Q8IZE3 742 aa3.68□□□□□ -1.82
COL8A1-204ENST00000462604 CPXCR1Q8N123 301 aa3.68□□□□□ -1.82
COL8A1-204ENST00000462604 ARHGAP18Q8N392 663 aa3.68□□□□□ -1.82
COL8A1-204ENST00000462604 DDX51Q8N8A6 666 aaKnown RBP eCLIP3.68□□□□□ -1.82
COL8A1-204ENST00000462604 NAT8LQ8N9F0 302 aa3.68□□□□□ -1.82
COL8A1-204ENST00000462604 GLIS1Q8NBF1 620 aa3.68□□□□□ -1.82
COL8A1-204ENST00000462604 SMC1BQ8NDV3 1235 aa3.68□□□□□ -1.82
COL8A1-204ENST00000462604 FBXO36Q8NEA4 188 aa3.68□□□□□ -1.82
COL8A1-204ENST00000462604 SPDYE1Q8NFV5 336 aaPredicted RBP3.68□□□□□ -1.82
COL8A1-204ENST00000462604 PPP1R14CQ8TAE6 165 aa3.68□□□□□ -1.82
COL8A1-204ENST00000462604 SLC35B2Q8TB61 432 aa3.68□□□□□ -1.82
COL8A1-204ENST00000462604 RAB3IL1Q8TBN0 382 aa3.68□□□□□ -1.82
COL8A1-204ENST00000462604 TCP10LQ8TDR4 215 aa3.68□□□□□ -1.82
COL8A1-204ENST00000462604 DCAKDQ8WVC6 231 aa3.68□□□□□ -1.82
COL8A1-204ENST00000462604 TEKT4Q8WW24 435 aa3.68□□□□□ -1.82
COL8A1-204ENST00000462604 SLC44A1Q8WWI5 657 aa3.68□□□□□ -1.82
COL8A1-204ENST00000462604 SCG3Q8WXD2 468 aaKnown RBP3.68□□□□□ -1.82
COL8A1-204ENST00000462604 CPT1BQ92523 772 aa3.68□□□□□ -1.82
COL8A1-204ENST00000462604 ZNF516Q92618 1163 aa3.68□□□□□ -1.82
COL8A1-204ENST00000462604 KCNN1Q92952 543 aa3.68□□□□□ -1.82
COL8A1-204ENST00000462604 TTC17Q96AE7 1141 aa3.68□□□□□ -1.82
COL8A1-204ENST00000462604 SKA1Q96BD8 255 aa3.68□□□□□ -1.82
COL8A1-204ENST00000462604 ACSF2Q96CM8 615 aaPredicted RBP3.68□□□□□ -1.82
COL8A1-204ENST00000462604 MTBPQ96DY7 904 aa3.68□□□□□ -1.82
COL8A1-204ENST00000462604 OXNAD1Q96HP4 312 aaPredicted RBP3.68□□□□□ -1.82
COL8A1-204ENST00000462604 GJD4Q96KN9 370 aaPredicted RBP3.68□□□□□ -1.82
COL8A1-204ENST00000462604 GBP5Q96PP8 586 aa3.68□□□□□ -1.82
COL8A1-204ENST00000462604 TAAR1Q96RJ0 339 aa3.68□□□□□ -1.82
COL8A1-204ENST00000462604 MIPEPQ99797 713 aa3.68□□□□□ -1.82
COL8A1-204ENST00000462604 TMEM121Q9BTD3 319 aa3.68□□□□□ -1.82
COL8A1-204ENST00000462604 CADM1Q9BY67 442 aaKnown RBP3.68□□□□□ -1.82
COL8A1-204ENST00000462604 TRIM4Q9C037 500 aa3.68□□□□□ -1.82
COL8A1-204ENST00000462604 FAM192AQ9GZU8 254 aa3.68□□□□□ -1.82
COL8A1-204ENST00000462604 WWP1Q9H0M0 922 aa3.68□□□□□ -1.82
COL8A1-204ENST00000462604 VCX3BQ9H321 246 aa3.68□□□□□ -1.82
COL8A1-204ENST00000462604 ZWILCHQ9H900 591 aa3.68□□□□□ -1.82
COL8A1-204ENST00000462604 SLC38A10Q9HBR0 1119 aa3.68□□□□□ -1.82
COL8A1-204ENST00000462604 GPAMQ9HCL2 828 aa3.68□□□□□ -1.82
COL8A1-204ENST00000462604 JPH1Q9HDC5 661 aaPredicted RBP3.68□□□□□ -1.82
COL8A1-204ENST00000462604 CYP26B1Q9NR63 512 aa3.68□□□□□ -1.82
COL8A1-204ENST00000462604 MKS1Q9NXB0 559 aa3.68□□□□□ -1.82
COL8A1-204ENST00000462604 NDE1Q9NXR1 346 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms