RNA–Protein interactions for RNA: ENST00000462494.5

ACTB-207, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 2,245 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-207ENST00000462494 FZD8Q9H461 694 aa17.78■□□□□ 0.44
ACTB-207ENST00000462494 SLCO1B3Q9NPD5 702 aa17.78■□□□□ 0.44
ACTB-207ENST00000462494 SIX4Q9UIU6 781 aa17.78■□□□□ 0.44
ACTB-207ENST00000462494 GRID1Q9ULK0 1009 aa17.78■□□□□ 0.44
ACTB-207ENST00000462494 PHTF1Q9UMS5 762 aa17.78■□□□□ 0.44
ACTB-207ENST00000462494 TRIM33Q9UPN9 1127 aa17.78■□□□□ 0.44
ACTB-207ENST00000462494 FARP1Q9Y4F1 1045 aaPredicted RBP17.78■□□□□ 0.44
ACTB-207ENST00000462494 LGR5O75473 907 aa17.77■□□□□ 0.44
ACTB-207ENST00000462494 RPL22P35268 128 aaKnown RBP17.77■□□□□ 0.44
ACTB-207ENST00000462494 ARL4CP56559 192 aa17.77■□□□□ 0.44
ACTB-207ENST00000462494 GEMIN4P57678 1058 aaKnown RBP17.77■□□□□ 0.44
ACTB-207ENST00000462494 C3orf62Q6ZUJ4 267 aa17.77■□□□□ 0.44
ACTB-207ENST00000462494 BBS12Q6ZW61 710 aa17.77■□□□□ 0.44
ACTB-207ENST00000462494 PLPPR4Q7Z2D5 763 aa17.77■□□□□ 0.44
ACTB-207ENST00000462494 UNC45BQ8IWX7 931 aa17.77■□□□□ 0.44
ACTB-207ENST00000462494 TTC13Q8NBP0 860 aa17.77■□□□□ 0.44
ACTB-207ENST00000462494 DENND1AQ8TEH3 1009 aa17.77■□□□□ 0.44
ACTB-207ENST00000462494 SMG5Q9UPR3 1016 aaKnown RBP17.77■□□□□ 0.44
ACTB-207ENST00000462494 STK38LQ9Y2H1 464 aa17.77■□□□□ 0.44
ACTB-207ENST00000462494 POLR2AP24928 1970 aaKnown RBP17.77■□□□□ 0.43
ACTB-207ENST00000462494 CLUHO75153 1309 aa17.77■□□□□ 0.43
ACTB-207ENST00000462494 TCRBV7S3A2A0A539 114 aa17.76■□□□□ 0.43
ACTB-207ENST00000462494 LACTBL1A8MY62 500 aa17.76■□□□□ 0.43
ACTB-207ENST00000462494 M0QYV0 167 aa17.76■□□□□ 0.43
ACTB-207ENST00000462494 PIK3R2O00459 728 aa17.76■□□□□ 0.43
ACTB-207ENST00000462494 IQCF3P0C7M6 154 aa17.76■□□□□ 0.43
ACTB-207ENST00000462494 KRT4P19013 534 aa17.76■□□□□ 0.43
ACTB-207ENST00000462494 SLC8A1P32418 973 aa17.76■□□□□ 0.43
ACTB-207ENST00000462494 MBTD1Q05BQ5 628 aa17.76■□□□□ 0.43
ACTB-207ENST00000462494 SLC1A5Q15758 541 aa17.76■□□□□ 0.43
ACTB-207ENST00000462494 HHATQ5VTY9 493 aa17.76■□□□□ 0.43
ACTB-207ENST00000462494 RNF43Q68DV7 783 aa17.76■□□□□ 0.43
ACTB-207ENST00000462494 JADE1Q6IE81 842 aa17.76■□□□□ 0.43
ACTB-207ENST00000462494 FAM71DQ8N9W8 422 aa17.76■□□□□ 0.43
ACTB-207ENST00000462494 SLC4A11Q8NBS3 891 aa17.76■□□□□ 0.43
ACTB-207ENST00000462494 OTUD5Q96G74 571 aa17.76■□□□□ 0.43
ACTB-207ENST00000462494 MPHOSPH6Q99547 160 aaKnown RBP17.76■□□□□ 0.43
ACTB-207ENST00000462494 MAK16Q9BXY0 300 aaKnown RBP17.76■□□□□ 0.43
ACTB-207ENST00000462494 SENP1Q9P0U3 644 aa17.76■□□□□ 0.43
ACTB-207ENST00000462494 SLC24A2Q9UI40 661 aa17.76■□□□□ 0.43
ACTB-207ENST00000462494 RABGEF1Q9UJ41 708 aa17.76■□□□□ 0.43
ACTB-207ENST00000462494 GPR25O00155 361 aa17.76■□□□□ 0.43
ACTB-207ENST00000462494 SOCS7O14512 581 aa17.76■□□□□ 0.43
ACTB-207ENST00000462494 IRF6O14896 467 aa17.76■□□□□ 0.43
ACTB-207ENST00000462494 RNF8O76064 485 aa17.76■□□□□ 0.43
ACTB-207ENST00000462494 MICAL2O94851 1124 aa17.76■□□□□ 0.43
ACTB-207ENST00000462494 IL18RAPO95256 599 aa17.76■□□□□ 0.43
ACTB-207ENST00000462494 MIPP30301 263 aa17.76■□□□□ 0.43
ACTB-207ENST00000462494 PHBP35232 272 aa17.76■□□□□ 0.43
ACTB-207ENST00000462494 NRLP54845 237 aa17.76■□□□□ 0.43
ACTB-207ENST00000462494 EIF3EP60228 445 aaKnown RBP17.76■□□□□ 0.43
ACTB-207ENST00000462494 BASP1P80723 227 aaKnown RBP17.76■□□□□ 0.43
ACTB-207ENST00000462494 PTPN11Q06124 597 aaPredicted RBP17.76■□□□□ 0.43
ACTB-207ENST00000462494 BBS9Q3SYG4 887 aa17.76■□□□□ 0.43
ACTB-207ENST00000462494 PREPLQ4J6C6 727 aaPredicted RBP17.76■□□□□ 0.43
ACTB-207ENST00000462494 NAT8LQ8N9F0 302 aa17.76■□□□□ 0.43
ACTB-207ENST00000462494 FBXO36Q8NEA4 188 aa17.76■□□□□ 0.43
ACTB-207ENST00000462494 LRRC8CQ8TDW0 803 aa17.76■□□□□ 0.43
ACTB-207ENST00000462494 BCO2Q9BYV7 579 aa17.76■□□□□ 0.43
ACTB-207ENST00000462494 ELP3Q9H9T3 547 aa17.76■□□□□ 0.43
ACTB-207ENST00000462494 EFR3BQ9Y2G0 817 aa17.76■□□□□ 0.43
ACTB-207ENST00000462494 MGAMO43451 1857 aa17.75■□□□□ 0.43
ACTB-207ENST00000462494 GBP2P32456 591 aaPredicted RBP17.75■□□□□ 0.43
ACTB-207ENST00000462494 FAM182AQ5T1J6 154 aa17.75■□□□□ 0.43
ACTB-207ENST00000462494 FAM102AQ5T9C2 384 aaPredicted RBP17.75■□□□□ 0.43
ACTB-207ENST00000462494 PALM2Q8IXS6 379 aa17.75■□□□□ 0.43
ACTB-207ENST00000462494 ATP11CQ8NB49 1132 aa17.75■□□□□ 0.43
ACTB-207ENST00000462494 UBA3Q8TBC4 463 aa17.75■□□□□ 0.43
ACTB-207ENST00000462494 MAGEC3Q8TD91 643 aa17.75■□□□□ 0.43
ACTB-207ENST00000462494 FBF1Q8TES7 1133 aa17.75■□□□□ 0.43
ACTB-207ENST00000462494 FNIP1Q8TF40 1166 aa17.75■□□□□ 0.43
ACTB-207ENST00000462494 HEXIM2Q96MH2 286 aaKnown RBP17.75■□□□□ 0.43
ACTB-207ENST00000462494 ADPGKQ9BRR6 497 aa17.75■□□□□ 0.43
ACTB-207ENST00000462494 ELOVL4Q9GZR5 314 aa17.75■□□□□ 0.43
ACTB-207ENST00000462494 ASCC2Q9H1I8 757 aaPredicted RBP17.75■□□□□ 0.43
ACTB-207ENST00000462494 WDR35Q9P2L0 1181 aa17.75■□□□□ 0.43
ACTB-207ENST00000462494 XPO7Q9UIA9 1087 aaKnown RBP17.75■□□□□ 0.43
ACTB-207ENST00000462494 USP18Q9UMW8 372 aa17.75■□□□□ 0.43
ACTB-207ENST00000462494 KRT16P08779 473 aa17.75■□□□□ 0.43
ACTB-207ENST00000462494 STAG3L1P0CL83 205 aa17.75■□□□□ 0.43
ACTB-207ENST00000462494 EZRP15311 586 aaKnown RBP17.75■□□□□ 0.43
ACTB-207ENST00000462494 SYCP2LQ5T4T6 812 aa17.75■□□□□ 0.43
ACTB-207ENST00000462494 PLCD3Q8N3E9 789 aa17.75■□□□□ 0.43
ACTB-207ENST00000462494 TMEM176AQ96HP8 235 aa17.75■□□□□ 0.43
ACTB-207ENST00000462494 TNFSF13BQ9Y275 285 aa17.75■□□□□ 0.43
ACTB-207ENST00000462494 STARD13Q9Y3M8 1113 aa17.75■□□□□ 0.43
ACTB-207ENST00000462494 MCF2LO15068 1137 aa17.74■□□□□ 0.43
ACTB-207ENST00000462494 CNMDO75829 334 aa17.74■□□□□ 0.43
ACTB-207ENST00000462494 TXNP10599 105 aaKnown RBP17.74■□□□□ 0.43
ACTB-207ENST00000462494 MAP2K2P36507 400 aa17.74■□□□□ 0.43
ACTB-207ENST00000462494 MMRN1Q13201 1228 aa17.74■□□□□ 0.43
ACTB-207ENST00000462494 ACVR2BQ13705 512 aa17.74■□□□□ 0.43
ACTB-207ENST00000462494 ZNF268Q14587 947 aaPredicted RBP17.74■□□□□ 0.43
ACTB-207ENST00000462494 SEPT7Q16181 437 aaKnown RBP17.74■□□□□ 0.43
ACTB-207ENST00000462494 PDK4Q16654 411 aa17.74■□□□□ 0.43
ACTB-207ENST00000462494 EFHC2Q5JST6 749 aa17.74■□□□□ 0.43
ACTB-207ENST00000462494 LVRNQ6Q4G3 990 aa17.74■□□□□ 0.43
ACTB-207ENST00000462494 NPNTQ6UXI9 565 aa17.74■□□□□ 0.43
ACTB-207ENST00000462494 SPATA18Q8TC71 538 aa17.74■□□□□ 0.43
ACTB-207ENST00000462494 CPB2Q96IY4 423 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms