RNA–Protein interactions for RNA: ENST00000461624.1

SPTA1-202, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 2

Gene SPTA1, Length 930 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-202ENST00000461624 SLCO6A1Q86UG4 719 aa6.06□□□□□ -1.44
SPTA1-202ENST00000461624 CABP7Q86V35 215 aa6.06□□□□□ -1.44
SPTA1-202ENST00000461624 IFNL3Q8IZI9 196 aa6.06□□□□□ -1.44
SPTA1-202ENST00000461624 TMEM57Q8N5G2 664 aa6.06□□□□□ -1.44
SPTA1-202ENST00000461624 CELF5Q8N6W0 485 aaKnown RBP6.06□□□□□ -1.44
SPTA1-202ENST00000461624 SREK1Q8WXA9 508 aaKnown RBP6.06□□□□□ -1.44
SPTA1-202ENST00000461624 GLG1Q92896 1179 aa6.06□□□□□ -1.44
SPTA1-202ENST00000461624 ZNF707Q96C28 371 aaPredicted RBP6.06□□□□□ -1.44
SPTA1-202ENST00000461624 YTHDC1Q96MU7 727 aaKnown RBP6.06□□□□□ -1.44
SPTA1-202ENST00000461624 INPP4AQ96PE3 977 aaPredicted RBP6.06□□□□□ -1.44
SPTA1-202ENST00000461624 ADAM2Q99965 735 aa6.06□□□□□ -1.44
SPTA1-202ENST00000461624 RPP25Q9BUL9 199 aaKnown RBP6.06□□□□□ -1.44
SPTA1-202ENST00000461624 ELAC1Q9H777 363 aaKnown RBP6.06□□□□□ -1.44
SPTA1-202ENST00000461624 MLXIPQ9HAP2 919 aa6.06□□□□□ -1.44
SPTA1-202ENST00000461624 C1orf112Q9NSG2 853 aa6.06□□□□□ -1.44
SPTA1-202ENST00000461624 TMEM161AQ9NX61 479 aa6.06□□□□□ -1.44
SPTA1-202ENST00000461624 ERVK13-1Q9NX77 482 aa6.06□□□□□ -1.44
SPTA1-202ENST00000461624 ZNF215Q9UL58 517 aaPredicted RBP6.06□□□□□ -1.44
SPTA1-202ENST00000461624 GPR55Q9Y2T6 319 aaPredicted RBP6.06□□□□□ -1.44
SPTA1-202ENST00000461624 PCDHB7Q9Y5E2 793 aa6.06□□□□□ -1.44
SPTA1-202ENST00000461624 TRPV2Q9Y5S1 764 aa6.06□□□□□ -1.44
SPTA1-202ENST00000461624 FHOD1Q9Y613 1164 aa6.06□□□□□ -1.44
SPTA1-202ENST00000461624 PTPRQQ9UMZ3 2332 aa6.06□□□□□ -1.44
SPTA1-202ENST00000461624 BOD1L1Q8NFC6 3051 aa6.06□□□□□ -1.44
SPTA1-202ENST00000461624 EVPLQ92817 2033 aa6.06□□□□□ -1.44
SPTA1-202ENST00000461624 NOTCH4Q99466 2003 aa6.06□□□□□ -1.44
SPTA1-202ENST00000461624 ITPR2Q14571 2701 aa6.05□□□□□ -1.44
SPTA1-202ENST00000461624 COL6A6A6NMZ7 2263 aa6.05□□□□□ -1.44
SPTA1-202ENST00000461624 TSPY2A6NKD2 308 aa6.05□□□□□ -1.44
SPTA1-202ENST00000461624 MEIS1O00470 390 aa6.05□□□□□ -1.44
SPTA1-202ENST00000461624 NOP56O00567 594 aaKnown RBP6.05□□□□□ -1.44
SPTA1-202ENST00000461624 SHOXO15266 292 aa6.05□□□□□ -1.44
SPTA1-202ENST00000461624 CXCL14O95715 111 aa6.05□□□□□ -1.44
SPTA1-202ENST00000461624 RPLP2P05387 115 aaKnown RBP6.05□□□□□ -1.44
SPTA1-202ENST00000461624 TOP1P11387 765 aaKnown RBP6.05□□□□□ -1.44
SPTA1-202ENST00000461624 MYCLP12524 364 aaPredicted RBP6.05□□□□□ -1.44
SPTA1-202ENST00000461624 LAMP2P13473 410 aa6.05□□□□□ -1.44
SPTA1-202ENST00000461624 GNAT2P19087 354 aa6.05□□□□□ -1.44
SPTA1-202ENST00000461624 CLCN4P51793 760 aa6.05□□□□□ -1.44
SPTA1-202ENST00000461624 POLGP54098 1239 aaPredicted RBP6.05□□□□□ -1.44
SPTA1-202ENST00000461624 GPC5P78333 572 aa6.05□□□□□ -1.44
SPTA1-202ENST00000461624 MTAPQ13126 283 aa6.05□□□□□ -1.44
SPTA1-202ENST00000461624 CDC37Q16543 378 aaPredicted RBP6.05□□□□□ -1.44
SPTA1-202ENST00000461624 IL31Q6EBC2 164 aa6.05□□□□□ -1.44
SPTA1-202ENST00000461624 ZSCAN25Q6NSZ9 544 aa6.05□□□□□ -1.44
SPTA1-202ENST00000461624 RSPO2Q6UXX9 243 aaPredicted RBP6.05□□□□□ -1.44
SPTA1-202ENST00000461624 VPS52Q8N1B4 723 aa6.05□□□□□ -1.44
SPTA1-202ENST00000461624 LRRC43Q8N309 656 aa6.05□□□□□ -1.44
SPTA1-202ENST00000461624 MZB1Q8WU39 189 aa6.05□□□□□ -1.44
SPTA1-202ENST00000461624 KLHL6Q8WZ60 621 aa6.05□□□□□ -1.44
SPTA1-202ENST00000461624 APPBP2Q92624 585 aa6.05□□□□□ -1.44
SPTA1-202ENST00000461624 MYL10Q9BUA6 226 aa6.05□□□□□ -1.44
SPTA1-202ENST00000461624 CELF4Q9BZC1 486 aaKnown RBP6.05□□□□□ -1.44
SPTA1-202ENST00000461624 FAM49AQ9H0Q0 323 aaPredicted RBP6.05□□□□□ -1.44
SPTA1-202ENST00000461624 NOC2LQ9Y3T9 749 aaKnown RBP6.05□□□□□ -1.44
SPTA1-202ENST00000461624 ZNF451Q9Y4E5 1061 aa6.05□□□□□ -1.44
SPTA1-202ENST00000461624 NUMBLQ9Y6R0 609 aa6.05□□□□□ -1.44
SPTA1-202ENST00000461624 URB1O60287 2271 aaKnown RBP6.05□□□□□ -1.44
SPTA1-202ENST00000461624 WDR81Q562E7 1941 aa6.05□□□□□ -1.44
SPTA1-202ENST00000461624 GSTTP1A0A1W2PQM5 241 aa6.04□□□□□ -1.44
SPTA1-202ENST00000461624 CBFA2T2O43439 604 aa6.04□□□□□ -1.44
SPTA1-202ENST00000461624 EPHX1P07099 455 aa6.04□□□□□ -1.44
SPTA1-202ENST00000461624 CD72P21854 359 aa6.04□□□□□ -1.44
SPTA1-202ENST00000461624 NOP2P46087 812 aaKnown RBP6.04□□□□□ -1.44
SPTA1-202ENST00000461624 CDR1P51861 262 aa6.04□□□□□ -1.44
SPTA1-202ENST00000461624 ZNF445P59923 1031 aa6.04□□□□□ -1.44
SPTA1-202ENST00000461624 POU4F1Q01851 419 aa6.04□□□□□ -1.44
SPTA1-202ENST00000461624 UBXN2BQ14CS0 331 aa6.04□□□□□ -1.44
SPTA1-202ENST00000461624 SF3A2Q15428 464 aaKnown RBP6.04□□□□□ -1.44
SPTA1-202ENST00000461624 QRICH1Q2TAL8 776 aa6.04□□□□□ -1.44
SPTA1-202ENST00000461624 SLC44A4Q53GD3 710 aa6.04□□□□□ -1.44
SPTA1-202ENST00000461624 UTP14CQ5TAP6 766 aaKnown RBP6.04□□□□□ -1.44
SPTA1-202ENST00000461624 STPG1Q5TH74 334 aa6.04□□□□□ -1.44
SPTA1-202ENST00000461624 POMZP3Q6PJE2 187 aa6.04□□□□□ -1.44
SPTA1-202ENST00000461624 C6orf15Q6UXA7 325 aaPredicted RBP6.04□□□□□ -1.44
SPTA1-202ENST00000461624 CYP26C1Q6V0L0 522 aa6.04□□□□□ -1.44
SPTA1-202ENST00000461624 DDX53Q86TM3 631 aaKnown RBP6.04□□□□□ -1.44
SPTA1-202ENST00000461624 CLASRPQ8N2M8 674 aaKnown RBP6.04□□□□□ -1.44
SPTA1-202ENST00000461624 HNRNPLLQ8WVV9 542 aaKnown RBP6.04□□□□□ -1.44
SPTA1-202ENST00000461624 FGF14Q92915 247 aa6.04□□□□□ -1.44
SPTA1-202ENST00000461624 SENP7Q9BQF6 1050 aa6.04□□□□□ -1.44
SPTA1-202ENST00000461624 KLHL25Q9H0H3 589 aa6.04□□□□□ -1.44
SPTA1-202ENST00000461624 ATP6V0A4Q9HBG4 840 aa6.04□□□□□ -1.44
SPTA1-202ENST00000461624 TNFRSF12AQ9NP84 129 aa6.04□□□□□ -1.44
SPTA1-202ENST00000461624 TCP11L1Q9NUJ3 509 aa6.04□□□□□ -1.44
SPTA1-202ENST00000461624 KLHL14Q9P2G3 628 aa6.04□□□□□ -1.44
SPTA1-202ENST00000461624 ANKFY1Q9P2R3 1169 aa6.04□□□□□ -1.44
SPTA1-202ENST00000461624 ANAPC4Q9UJX5 808 aa6.04□□□□□ -1.44
SPTA1-202ENST00000461624 ACSL6Q9UKU0 697 aa6.04□□□□□ -1.44
SPTA1-202ENST00000461624 RAB23Q9ULC3 237 aa6.04□□□□□ -1.44
SPTA1-202ENST00000461624 PCDHA2Q9Y5H9 948 aa6.04□□□□□ -1.44
SPTA1-202ENST00000461624 BAZ2BQ9UIF8 2168 aaKnown RBP6.04□□□□□ -1.44
SPTA1-202ENST00000461624 FBN2P35556 2912 aa6.04□□□□□ -1.44
SPTA1-202ENST00000461624 USP9YO00507 2555 aaPredicted RBP6.04□□□□□ -1.44
SPTA1-202ENST00000461624 NBPF19A0A087WUL8 3843 aa6.03□□□□□ -1.44
SPTA1-202ENST00000461624 DENND3A2RUS2 1198 aa6.03□□□□□ -1.44
SPTA1-202ENST00000461624 RNF113AO15541 343 aaKnown RBP6.03□□□□□ -1.44
SPTA1-202ENST00000461624 B4GALT3O60512 393 aa6.03□□□□□ -1.44
SPTA1-202ENST00000461624 PPP1R11O60927 126 aaPredicted RBP6.03□□□□□ -1.44
SPTA1-202ENST00000461624 C1QL1O75973 258 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms