RNA–Protein interactions for RNA: ENST00000461328.1

VARS-219, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-219ENST00000461328 ZMYM5Q9UJ78 669 aa16.41■□□□□ 0.22
VARS-219ENST00000461328 CTNND2Q9UQB3 1225 aa16.41■□□□□ 0.22
VARS-219ENST00000461328 MRPS17Q9Y2R5 130 aaKnown RBP16.41■□□□□ 0.22
VARS-219ENST00000461328 MTF2Q9Y483 593 aaPredicted RBP16.41■□□□□ 0.22
VARS-219ENST00000461328 SLC38A8A6NNN8 435 aa16.4■□□□□ 0.22
VARS-219ENST00000461328 MAN2B1O00754 1011 aa16.4■□□□□ 0.22
VARS-219ENST00000461328 SLC16A3O15427 465 aaKnown RBP16.4■□□□□ 0.22
VARS-219ENST00000461328 STX10O60499 249 aa16.4■□□□□ 0.22
VARS-219ENST00000461328 FAM163BP0C2L3 166 aa16.4■□□□□ 0.22
VARS-219ENST00000461328 HMGA1P17096 107 aaKnown RBP16.4■□□□□ 0.22
VARS-219ENST00000461328 CCNE1P24864 410 aa16.4■□□□□ 0.22
VARS-219ENST00000461328 TARSP26639 723 aaKnown RBP16.4■□□□□ 0.22
VARS-219ENST00000461328 ANXA13P27216 316 aa16.4■□□□□ 0.22
VARS-219ENST00000461328 MAGEA11P43364 429 aa16.4■□□□□ 0.22
VARS-219ENST00000461328 MXI1P50539 228 aa16.4■□□□□ 0.22
VARS-219ENST00000461328 PMS1P54277 932 aaKnown RBP16.4■□□□□ 0.22
VARS-219ENST00000461328 CDH8P55286 799 aa16.4■□□□□ 0.22
VARS-219ENST00000461328 ENPEPQ07075 957 aa16.4■□□□□ 0.22
VARS-219ENST00000461328 PPP3CAQ08209 521 aa16.4■□□□□ 0.22
VARS-219ENST00000461328 CAMK4Q16566 473 aa16.4■□□□□ 0.22
VARS-219ENST00000461328 SPOPLQ6IQ16 392 aa16.4■□□□□ 0.22
VARS-219ENST00000461328 MYCBPAPQ8TBZ2 947 aa16.4■□□□□ 0.22
VARS-219ENST00000461328 CSGALNACT1Q8TDX6 532 aa16.4■□□□□ 0.22
VARS-219ENST00000461328 MRPS31Q92665 395 aaKnown RBP16.4■□□□□ 0.22
VARS-219ENST00000461328 DHTKD1Q96HY7 919 aaPredicted RBP16.4■□□□□ 0.22
VARS-219ENST00000461328 DPEP3Q9H4B8 488 aa16.4■□□□□ 0.22
VARS-219ENST00000461328 TMEM8AQ9HCN3 771 aa16.4■□□□□ 0.22
VARS-219ENST00000461328 UXTQ9UBK9 157 aaPredicted RBP16.4■□□□□ 0.22
VARS-219ENST00000461328 PIEZO1Q92508 2521 aa16.4■□□□□ 0.22
VARS-219ENST00000461328 BICDL2A1A5D9 508 aa16.39■□□□□ 0.21
VARS-219ENST00000461328 CHADO15335 359 aa16.39■□□□□ 0.21
VARS-219ENST00000461328 NCAM2O15394 837 aa16.39■□□□□ 0.21
VARS-219ENST00000461328 NOL4O94818 638 aa16.39■□□□□ 0.21
VARS-219ENST00000461328 PRAMEF12O95522 483 aa16.39■□□□□ 0.21
VARS-219ENST00000461328 ASS1P00966 412 aaKnown RBP16.39■□□□□ 0.21
VARS-219ENST00000461328 F11P03951 625 aa16.39■□□□□ 0.21
VARS-219ENST00000461328 GLULP15104 373 aa16.39■□□□□ 0.21
VARS-219ENST00000461328 PTPN1P18031 435 aaKnown RBP16.39■□□□□ 0.21
VARS-219ENST00000461328 TRIM21P19474 475 aaKnown RBP16.39■□□□□ 0.21
VARS-219ENST00000461328 BDNFP23560 247 aa16.39■□□□□ 0.21
VARS-219ENST00000461328 DDX6P26196 483 aaKnown RBP eCLIP16.39■□□□□ 0.21
VARS-219ENST00000461328 WEE1P30291 646 aa16.39■□□□□ 0.21
VARS-219ENST00000461328 AVPR1AP37288 418 aa16.39■□□□□ 0.21
VARS-219ENST00000461328 GRIK1P39086 918 aa16.39■□□□□ 0.21
VARS-219ENST00000461328 NBL1P41271 181 aa16.39■□□□□ 0.21
VARS-219ENST00000461328 NOP14P78316 857 aaKnown RBP16.39■□□□□ 0.21
VARS-219ENST00000461328 FCHO2Q0JRZ9 810 aa16.39■□□□□ 0.21
VARS-219ENST00000461328 KRT39Q6A163 491 aa16.39■□□□□ 0.21
VARS-219ENST00000461328 TMEM150AQ86TG1 271 aa16.39■□□□□ 0.21
VARS-219ENST00000461328 C1orf210Q8IVY1 113 aa16.39■□□□□ 0.21
VARS-219ENST00000461328 CMTM8Q8IZV2 173 aa16.39■□□□□ 0.21
VARS-219ENST00000461328 MAB21L3Q8N8X9 362 aa16.39■□□□□ 0.21
VARS-219ENST00000461328 B3GALNT2Q8NCR0 500 aa16.39■□□□□ 0.21
VARS-219ENST00000461328 TAS1R2Q8TE23 839 aa16.39■□□□□ 0.21
VARS-219ENST00000461328 NELFBQ8WX92 580 aa16.39■□□□□ 0.21
VARS-219ENST00000461328 PCED1BQ96HM7 432 aa16.39■□□□□ 0.21
VARS-219ENST00000461328 TNIP3Q96KP6 325 aa16.39■□□□□ 0.21
VARS-219ENST00000461328 MED10Q9BTT4 135 aa16.39■□□□□ 0.21
VARS-219ENST00000461328 SLC46A2Q9BY10 475 aa16.39■□□□□ 0.21
VARS-219ENST00000461328 SMG9Q9H0W8 520 aaKnown RBP16.39■□□□□ 0.21
VARS-219ENST00000461328 SPATA6Q9NWH7 488 aaPredicted RBP16.39■□□□□ 0.21
VARS-219ENST00000461328 OBP2AQ9NY56 170 aa16.39■□□□□ 0.21
VARS-219ENST00000461328 NDRG2Q9UN36 371 aaKnown RBP16.39■□□□□ 0.21
VARS-219ENST00000461328 PIAS3Q9Y6X2 628 aa16.39■□□□□ 0.21
VARS-219ENST00000461328 CACNA1HO95180 2353 aa16.39■□□□□ 0.21
VARS-219ENST00000461328 ATP8B3O60423 1300 aa16.39■□□□□ 0.21
VARS-219ENST00000461328 ARNTLO00327 626 aa16.38■□□□□ 0.21
VARS-219ENST00000461328 TRIM66O15016 1216 aa16.38■□□□□ 0.21
VARS-219ENST00000461328 CD44P16070 742 aaKnown RBP16.38■□□□□ 0.21
VARS-219ENST00000461328 GTF2H1P32780 548 aa16.38■□□□□ 0.21
VARS-219ENST00000461328 MAGEA9P43362 315 aa16.38■□□□□ 0.21
VARS-219ENST00000461328 MORC3Q14149 939 aa16.38■□□□□ 0.21
VARS-219ENST00000461328 CCDC40Q4G0X9 1142 aa16.38■□□□□ 0.21
VARS-219ENST00000461328 ARHGAP29Q52LW3 1261 aa16.38■□□□□ 0.21
VARS-219ENST00000461328 VSTM1Q6UX27 236 aa16.38■□□□□ 0.21
VARS-219ENST00000461328 FRMD5Q7Z6J6 570 aa16.38■□□□□ 0.21
VARS-219ENST00000461328 CELF5Q8N6W0 485 aaKnown RBP16.38■□□□□ 0.21
VARS-219ENST00000461328 BPIFB1Q8TDL5 484 aa16.38■□□□□ 0.21
VARS-219ENST00000461328 FAM3CQ92520 227 aa16.38■□□□□ 0.21
VARS-219ENST00000461328 TRMT2BQ96GJ1 504 aaKnown RBP16.38■□□□□ 0.21
VARS-219ENST00000461328 MYRFLQ96LU7 910 aa16.38■□□□□ 0.21
VARS-219ENST00000461328 LRRC3BQ96PB8 259 aa16.38■□□□□ 0.21
VARS-219ENST00000461328 ELOVL4Q9GZR5 314 aa16.38■□□□□ 0.21
VARS-219ENST00000461328 SDCBP2Q9H190 292 aa16.38■□□□□ 0.21
VARS-219ENST00000461328 ARMCX3Q9UH62 379 aaPredicted RBP16.38■□□□□ 0.21
VARS-219ENST00000461328 NME7Q9Y5B8 376 aa16.38■□□□□ 0.21
VARS-219ENST00000461328 MIA3Q5JRA6 1907 aa16.38■□□□□ 0.21
VARS-219ENST00000461328 NUP210Q8TEM1 1887 aaPredicted RBP16.37■□□□□ 0.21
VARS-219ENST00000461328 PROB1E7EW31 1015 aa16.37■□□□□ 0.21
VARS-219ENST00000461328 GFRA3O60609 400 aa16.37■□□□□ 0.21
VARS-219ENST00000461328 KPNA1P52294 538 aaPredicted RBP16.37■□□□□ 0.21
VARS-219ENST00000461328 PAK1Q13153 545 aa16.37■□□□□ 0.21
VARS-219ENST00000461328 ORC1Q13415 861 aa16.37■□□□□ 0.21
VARS-219ENST00000461328 TXNDC8Q6A555 127 aa16.37■□□□□ 0.21
VARS-219ENST00000461328 ZC3H3Q8IXZ2 948 aaKnown RBP16.37■□□□□ 0.21
VARS-219ENST00000461328 MSANTD3Q96H12 275 aa16.37■□□□□ 0.21
VARS-219ENST00000461328 ZFYVE19Q96K21 471 aa16.37■□□□□ 0.21
VARS-219ENST00000461328 CEP63Q96MT8 703 aa16.37■□□□□ 0.21
VARS-219ENST00000461328 ZNF518BQ9C0D4 1074 aa16.37■□□□□ 0.21
VARS-219ENST00000461328 NIF3L1Q9GZT8 377 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 102.1 ms