RNA–Protein interactions for RNA: ENST00000461127.5

TOP3A-202, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-202ENST00000461127 TRMT2BQ96GJ1 504 aaKnown RBP18.53■□□□□ 0.56
TOP3A-202ENST00000461127 FNBP1Q96RU3 617 aa18.53■□□□□ 0.56
TOP3A-202ENST00000461127 PI4K2AQ9BTU6 479 aa18.53■□□□□ 0.56
TOP3A-202ENST00000461127 MSTO1Q9BUK6 570 aa18.53■□□□□ 0.56
TOP3A-202ENST00000461127 KCND2Q9NZV8 630 aa18.53■□□□□ 0.56
TOP3A-202ENST00000461127 PILRBQ9UKJ0 227 aa18.53■□□□□ 0.56
TOP3A-202ENST00000461127 PTPRDP23468 1912 aa18.53■□□□□ 0.56
TOP3A-202ENST00000461127 LOC400499M0QZD8 3231 aa18.52■□□□□ 0.56
TOP3A-202ENST00000461127 FLNBO75369 2602 aaKnown RBP18.52■□□□□ 0.56
TOP3A-202ENST00000461127 IGSF10Q6WRI0 2623 aa18.52■□□□□ 0.56
TOP3A-202ENST00000461127 FAM189A1O60320 539 aa18.52■□□□□ 0.56
TOP3A-202ENST00000461127 HSP90AA1P07900 732 aaKnown RBP18.52■□□□□ 0.56
TOP3A-202ENST00000461127 NFICP08651 508 aa18.52■□□□□ 0.56
TOP3A-202ENST00000461127 SCP2P22307 547 aa18.52■□□□□ 0.56
TOP3A-202ENST00000461127 GPR15P49685 360 aa18.52■□□□□ 0.56
TOP3A-202ENST00000461127 PDE6CP51160 858 aa18.52■□□□□ 0.56
TOP3A-202ENST00000461127 KCNB1Q14721 858 aa18.52■□□□□ 0.56
TOP3A-202ENST00000461127 ZRSR1Q15695 479 aaKnown RBP18.52■□□□□ 0.56
TOP3A-202ENST00000461127 COL28A1Q2UY09 1125 aa18.52■□□□□ 0.56
TOP3A-202ENST00000461127 TMEM92Q6UXU6 159 aa18.52■□□□□ 0.56
TOP3A-202ENST00000461127 STKLD1Q8NE28 680 aa18.52■□□□□ 0.56
TOP3A-202ENST00000461127 TMX3Q96JJ7 454 aa18.52■□□□□ 0.56
TOP3A-202ENST00000461127 C8orf76Q96K31 380 aa18.52■□□□□ 0.56
TOP3A-202ENST00000461127 MYRFLQ96LU7 910 aa18.52■□□□□ 0.56
TOP3A-202ENST00000461127 IPO9Q96P70 1041 aaKnown RBP18.52■□□□□ 0.56
TOP3A-202ENST00000461127 CYP2S1Q96SQ9 504 aa18.52■□□□□ 0.56
TOP3A-202ENST00000461127 MBD1Q9UIS9 605 aaPredicted RBP18.52■□□□□ 0.56
TOP3A-202ENST00000461127 ACACAQ13085 2346 aa18.52■□□□□ 0.56
TOP3A-202ENST00000461127 LAMA5O15230 3695 aa18.52■□□□□ 0.55
TOP3A-202ENST00000461127 ATXN2Q99700 1313 aaKnown RBP18.51■□□□□ 0.55
TOP3A-202ENST00000461127 TNRC6BQ9UPQ9 1833 aaKnown RBP18.51■□□□□ 0.55
TOP3A-202ENST00000461127 MYMKA6NI61 221 aa18.51■□□□□ 0.55
TOP3A-202ENST00000461127 PP2D1A8MPX8 630 aa18.51■□□□□ 0.55
TOP3A-202ENST00000461127 AP5Z1O43299 807 aa18.51■□□□□ 0.55
TOP3A-202ENST00000461127 TADA3O75528 432 aa18.51■□□□□ 0.55
TOP3A-202ENST00000461127 NOL4O94818 638 aa18.51■□□□□ 0.55
TOP3A-202ENST00000461127 CAPNS1P04632 268 aa18.51■□□□□ 0.55
TOP3A-202ENST00000461127 CDC25AP30304 524 aa18.51■□□□□ 0.55
TOP3A-202ENST00000461127 OPRD1P41143 372 aa18.51■□□□□ 0.55
TOP3A-202ENST00000461127 NCKAP1LP55160 1127 aa18.51■□□□□ 0.55
TOP3A-202ENST00000461127 SV2CQ496J9 727 aa18.51■□□□□ 0.55
TOP3A-202ENST00000461127 EOGTQ5NDL2 527 aa18.51■□□□□ 0.55
TOP3A-202ENST00000461127 SDHAF4Q5VUM1 108 aa18.51■□□□□ 0.55
TOP3A-202ENST00000461127 PEAR1Q5VY43 1037 aaPredicted RBP18.51■□□□□ 0.55
TOP3A-202ENST00000461127 KCNK18Q7Z418 384 aa18.51■□□□□ 0.55
TOP3A-202ENST00000461127 PGBD3Q8N328 593 aa18.51■□□□□ 0.55
TOP3A-202ENST00000461127 ALLCQ8N6M5 410 aa18.51■□□□□ 0.55
TOP3A-202ENST00000461127 TXNDC5Q8NBS9 432 aaKnown RBP18.51■□□□□ 0.55
TOP3A-202ENST00000461127 SLC22A12Q96S37 553 aa18.51■□□□□ 0.55
TOP3A-202ENST00000461127 CCSER1Q9C0I3 900 aa18.51■□□□□ 0.55
TOP3A-202ENST00000461127 LINC00597Q9H2U6 94 aa18.51■□□□□ 0.55
TOP3A-202ENST00000461127 ASB7Q9H672 318 aa18.51■□□□□ 0.55
TOP3A-202ENST00000461127 CCDC86Q9H6F5 360 aaKnown RBP18.51■□□□□ 0.55
TOP3A-202ENST00000461127 ABCB6Q9NP58 842 aa18.51■□□□□ 0.55
TOP3A-202ENST00000461127 CPSF3Q9UKF6 684 aaKnown RBP18.51■□□□□ 0.55
TOP3A-202ENST00000461127 C2CD2Q9Y426 696 aa18.51■□□□□ 0.55
TOP3A-202ENST00000461127 PCDHB9Q9Y5E1 797 aa18.51■□□□□ 0.55
TOP3A-202ENST00000461127 KLF8O95600 359 aaPredicted RBP18.5■□□□□ 0.55
TOP3A-202ENST00000461127 SERPINF2P08697 491 aa18.5■□□□□ 0.55
TOP3A-202ENST00000461127 TCF3P15923 654 aa18.5■□□□□ 0.55
TOP3A-202ENST00000461127 ITPKAP23677 461 aa18.5■□□□□ 0.55
TOP3A-202ENST00000461127 DDR2Q16832 855 aa18.5■□□□□ 0.55
TOP3A-202ENST00000461127 KCTD17Q8N5Z5 321 aa18.5■□□□□ 0.55
TOP3A-202ENST00000461127 ARL14EPQ8N8R7 260 aaPredicted RBP18.5■□□□□ 0.55
TOP3A-202ENST00000461127 SYT2Q8N9I0 419 aaPredicted RBP18.5■□□□□ 0.55
TOP3A-202ENST00000461127 LEO1Q8WVC0 666 aaPredicted RBP18.5■□□□□ 0.55
TOP3A-202ENST00000461127 HMGB4Q8WW32 186 aa18.5■□□□□ 0.55
TOP3A-202ENST00000461127 TMLHEQ9NVH6 421 aa18.5■□□□□ 0.55
TOP3A-202ENST00000461127 DPP3Q9NY33 737 aa18.5■□□□□ 0.55
TOP3A-202ENST00000461127 ARHGAP26Q9UNA1 814 aa18.5■□□□□ 0.55
TOP3A-202ENST00000461127 A0A0B4J269 797 aa18.49■□□□□ 0.55
TOP3A-202ENST00000461127 KPNA7A9QM74 516 aa18.49■□□□□ 0.55
TOP3A-202ENST00000461127 LAD1O00515 517 aa18.49■□□□□ 0.55
TOP3A-202ENST00000461127 PIGRP01833 764 aa18.49■□□□□ 0.55
TOP3A-202ENST00000461127 APODP05090 189 aa18.49■□□□□ 0.55
TOP3A-202ENST00000461127 SYPP08247 313 aa18.49■□□□□ 0.55
TOP3A-202ENST00000461127 HDCP19113 662 aa18.49■□□□□ 0.55
TOP3A-202ENST00000461127 TIE1P35590 1138 aa18.49■□□□□ 0.55
TOP3A-202ENST00000461127 FAM193AP78312 1265 aa18.49■□□□□ 0.55
TOP3A-202ENST00000461127 NBR1Q14596 966 aa18.49■□□□□ 0.55
TOP3A-202ENST00000461127 MAP7D1Q3KQU3 841 aa18.49■□□□□ 0.55
TOP3A-202ENST00000461127 DTHD1Q6ZMT9 781 aa18.49■□□□□ 0.55
TOP3A-202ENST00000461127 MINDY1Q8N5J2 469 aa18.49■□□□□ 0.55
TOP3A-202ENST00000461127 IL17RCQ8NAC3 791 aa18.49■□□□□ 0.55
TOP3A-202ENST00000461127 SPATA18Q8TC71 538 aa18.49■□□□□ 0.55
TOP3A-202ENST00000461127 KCNN1Q92952 543 aa18.49■□□□□ 0.55
TOP3A-202ENST00000461127 ZNF560Q96MR9 790 aa18.49■□□□□ 0.55
TOP3A-202ENST00000461127 PNKPQ96T60 521 aa18.49■□□□□ 0.55
TOP3A-202ENST00000461127 GCNT4Q9P109 453 aa18.49■□□□□ 0.55
TOP3A-202ENST00000461127 ADAMTS9Q9P2N4 1935 aa18.49■□□□□ 0.55
TOP3A-202ENST00000461127 PLXND1Q9Y4D7 1925 aa18.49■□□□□ 0.55
TOP3A-202ENST00000461127 HNRNPLP14866 589 aaKnown RBP eCLIP18.48■□□□□ 0.55
TOP3A-202ENST00000461127 CYP2F1P24903 491 aa18.48■□□□□ 0.55
TOP3A-202ENST00000461127 RPL6Q02878 288 aaKnown RBP18.48■□□□□ 0.55
TOP3A-202ENST00000461127 TRIP6Q15654 476 aaKnown RBP18.48■□□□□ 0.55
TOP3A-202ENST00000461127 ZC2HC1CQ53FD0 456 aaPredicted RBP18.48■□□□□ 0.55
TOP3A-202ENST00000461127 SLC36A4Q6YBV0 504 aa18.48■□□□□ 0.55
TOP3A-202ENST00000461127 FRMD1Q8N878 549 aa18.48■□□□□ 0.55
TOP3A-202ENST00000461127 CDK5RAP3Q96JB5 506 aa18.48■□□□□ 0.55
TOP3A-202ENST00000461127 CAPN10Q9HC96 672 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms