RNA–Protein interactions for RNA: ENST00000461063.6

SOX2-OT-202, SOX2 overlapping transcript, humanhuman

TSL 3 BASIC

Gene SOX2-OT, Length 566 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-202ENST00000461063 TMEM196Q5HYL7 178 aa9.42□□□□□ -0.9
SOX2-OT-202ENST00000461063 HEATR6Q6AI08 1181 aaKnown RBP9.42□□□□□ -0.9
SOX2-OT-202ENST00000461063 CNNM4Q6P4Q7 775 aa9.42□□□□□ -0.9
SOX2-OT-202ENST00000461063 PKN3Q6P5Z2 889 aa9.42□□□□□ -0.9
SOX2-OT-202ENST00000461063 FAM171BQ6P995 826 aa9.42□□□□□ -0.9
SOX2-OT-202ENST00000461063 SHC4Q6S5L8 630 aa9.42□□□□□ -0.9
SOX2-OT-202ENST00000461063 PRR23BQ6ZRT6 265 aa9.42□□□□□ -0.9
SOX2-OT-202ENST00000461063 STXBP4Q6ZWJ1 553 aa9.42□□□□□ -0.9
SOX2-OT-202ENST00000461063 EPM2AIP1Q7L775 607 aaPredicted RBP9.42□□□□□ -0.9
SOX2-OT-202ENST00000461063 DPH6Q7L8W6 267 aa9.42□□□□□ -0.9
SOX2-OT-202ENST00000461063 SPATA2LQ8IUW3 424 aaPredicted RBP9.42□□□□□ -0.9
SOX2-OT-202ENST00000461063 KBTBD7Q8WVZ9 684 aa9.42□□□□□ -0.9
SOX2-OT-202ENST00000461063 FUBP3Q96I24 572 aaKnown RBP eCLIP9.42□□□□□ -0.9
SOX2-OT-202ENST00000461063 ZNF396Q96N95 335 aaPredicted RBP9.42□□□□□ -0.9
SOX2-OT-202ENST00000461063 CYP2S1Q96SQ9 504 aa9.42□□□□□ -0.9
SOX2-OT-202ENST00000461063 EBF3Q9H4W6 596 aa9.42□□□□□ -0.9
SOX2-OT-202ENST00000461063 HSPBP1Q9NZL4 362 aa9.42□□□□□ -0.9
SOX2-OT-202ENST00000461063 UXTQ9UBK9 157 aaPredicted RBP9.42□□□□□ -0.9
SOX2-OT-202ENST00000461063 USP18Q9UMW8 372 aa9.42□□□□□ -0.9
SOX2-OT-202ENST00000461063 TRDMT1O14717 391 aaKnown RBP9.41□□□□□ -0.9
SOX2-OT-202ENST00000461063 EIF3DO15371 548 aaKnown RBP eCLIP9.41□□□□□ -0.9
SOX2-OT-202ENST00000461063 TGFB1I1O43294 461 aa9.41□□□□□ -0.9
SOX2-OT-202ENST00000461063 CUTAO60888 179 aa9.41□□□□□ -0.9
SOX2-OT-202ENST00000461063 YEATS4O95619 227 aa9.41□□□□□ -0.9
SOX2-OT-202ENST00000461063 SDHBP21912 280 aa9.41□□□□□ -0.9
SOX2-OT-202ENST00000461063 MAGEA11P43364 429 aa9.41□□□□□ -0.9
SOX2-OT-202ENST00000461063 ATXN1P54253 815 aaKnown RBP9.41□□□□□ -0.9
SOX2-OT-202ENST00000461063 PSMC1P62191 440 aaKnown RBP9.41□□□□□ -0.9
SOX2-OT-202ENST00000461063 ASIC1P78348 528 aa9.41□□□□□ -0.9
SOX2-OT-202ENST00000461063 AMPD3Q01432 767 aa9.41□□□□□ -0.9
SOX2-OT-202ENST00000461063 SPEM2Q0P670 501 aa9.41□□□□□ -0.9
SOX2-OT-202ENST00000461063 GRSF1Q12849 480 aaKnown RBP eCLIP9.41□□□□□ -0.9
SOX2-OT-202ENST00000461063 PDGFRLQ15198 375 aa9.41□□□□□ -0.9
SOX2-OT-202ENST00000461063 FSTL4Q6MZW2 842 aa9.41□□□□□ -0.9
SOX2-OT-202ENST00000461063 CC2D1AQ6P1N0 951 aaPredicted RBP9.41□□□□□ -0.9
SOX2-OT-202ENST00000461063 TRAPPC11Q7Z392 1133 aa9.41□□□□□ -0.9
SOX2-OT-202ENST00000461063 WDR5BQ86VZ2 330 aa9.41□□□□□ -0.9
SOX2-OT-202ENST00000461063 WDR49Q8IV35 697 aa9.41□□□□□ -0.9
SOX2-OT-202ENST00000461063 SCN4BQ8IWT1 228 aa9.41□□□□□ -0.9
SOX2-OT-202ENST00000461063 IQUBQ8NA54 791 aa9.41□□□□□ -0.9
SOX2-OT-202ENST00000461063 ZNF507Q8TCN5 953 aa9.41□□□□□ -0.9
SOX2-OT-202ENST00000461063 DHX58Q96C10 678 aa9.41□□□□□ -0.9
SOX2-OT-202ENST00000461063 SLC22A12Q96S37 553 aa9.41□□□□□ -0.9
SOX2-OT-202ENST00000461063 C7orf25Q9BPX7 421 aa9.41□□□□□ -0.9
SOX2-OT-202ENST00000461063 SYT15Q9BQS2 421 aa9.41□□□□□ -0.9
SOX2-OT-202ENST00000461063 KIAA1586Q9HCI6 787 aa9.41□□□□□ -0.9
SOX2-OT-202ENST00000461063 FBRSL1Q9HCM7 1045 aaKnown RBP9.41□□□□□ -0.9
SOX2-OT-202ENST00000461063 TRPC7Q9HCX4 862 aa9.41□□□□□ -0.9
SOX2-OT-202ENST00000461063 CRTAC1Q9NQ79 661 aa9.41□□□□□ -0.9
SOX2-OT-202ENST00000461063 AGPAT3Q9NRZ7 376 aa9.41□□□□□ -0.9
SOX2-OT-202ENST00000461063 CDH9Q9ULB4 789 aa9.41□□□□□ -0.9
SOX2-OT-202ENST00000461063 R3HCC1Q9Y3T6 440 aaKnown RBP9.41□□□□□ -0.9
SOX2-OT-202ENST00000461063 NUP210Q8TEM1 1887 aaPredicted RBP9.4□□□□□ -0.9
SOX2-OT-202ENST00000461063 TRAV19A0A0A6YYK7 116 aa9.4□□□□□ -0.9
SOX2-OT-202ENST00000461063 LRP3O75074 770 aa9.4□□□□□ -0.9
SOX2-OT-202ENST00000461063 CST3P01034 146 aaPredicted RBP9.4□□□□□ -0.9
SOX2-OT-202ENST00000461063 EGFP01133 1207 aa9.4□□□□□ -0.9
SOX2-OT-202ENST00000461063 CKMP06732 381 aa9.4□□□□□ -0.9
SOX2-OT-202ENST00000461063 PDGFRBP09619 1106 aa9.4□□□□□ -0.9
SOX2-OT-202ENST00000461063 USP17L7P0C7H9 530 aa9.4□□□□□ -0.9
SOX2-OT-202ENST00000461063 WARSP23381 471 aaKnown RBP9.4□□□□□ -0.9
SOX2-OT-202ENST00000461063 FOXK1P85037 733 aa9.4□□□□□ -0.9
SOX2-OT-202ENST00000461063 AMPD2Q01433 879 aa9.4□□□□□ -0.9
SOX2-OT-202ENST00000461063 FAM160A1Q05DH4 1040 aa9.4□□□□□ -0.9
SOX2-OT-202ENST00000461063 EHHADHQ08426 723 aa9.4□□□□□ -0.9
SOX2-OT-202ENST00000461063 MTF1Q14872 753 aa9.4□□□□□ -0.9
SOX2-OT-202ENST00000461063 ZNF77Q15935 545 aa9.4□□□□□ -0.9
SOX2-OT-202ENST00000461063 SNRNP35Q16560 246 aaKnown RBP9.4□□□□□ -0.9
SOX2-OT-202ENST00000461063 FAM26FQ5R3K3 315 aa9.4□□□□□ -0.9
SOX2-OT-202ENST00000461063 FOXD4L5Q5VV16 416 aaPredicted RBP9.4□□□□□ -0.9
SOX2-OT-202ENST00000461063 NAIF1Q69YI7 327 aaPredicted RBP9.4□□□□□ -0.9
SOX2-OT-202ENST00000461063 VSTM1Q6UX27 236 aa9.4□□□□□ -0.9
SOX2-OT-202ENST00000461063 C4orf50Q6ZRC1 276 aa9.4□□□□□ -0.9
SOX2-OT-202ENST00000461063 PLPP6Q8IY26 295 aa9.4□□□□□ -0.9
SOX2-OT-202ENST00000461063 RDH13Q8NBN7 331 aa9.4□□□□□ -0.9
SOX2-OT-202ENST00000461063 OSCP1Q8WVF1 389 aa9.4□□□□□ -0.9
SOX2-OT-202ENST00000461063 SCFD1Q8WVM8 642 aa9.4□□□□□ -0.9
SOX2-OT-202ENST00000461063 FOXD4L4Q8WXT5 416 aaPredicted RBP9.4□□□□□ -0.9
SOX2-OT-202ENST00000461063 MYLPFQ96A32 169 aa9.4□□□□□ -0.9
SOX2-OT-202ENST00000461063 SPATA17Q96L03 361 aa9.4□□□□□ -0.9
SOX2-OT-202ENST00000461063 GZF1Q9H116 711 aaPredicted RBP9.4□□□□□ -0.9
SOX2-OT-202ENST00000461063 GCNT4Q9P109 453 aa9.4□□□□□ -0.9
SOX2-OT-202ENST00000461063 MAGEC2Q9UBF1 373 aaPredicted RBP9.4□□□□□ -0.9
SOX2-OT-202ENST00000461063 CDV3Q9UKY7 258 aaKnown RBP9.4□□□□□ -0.9
SOX2-OT-202ENST00000461063 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.4□□□□□ -0.9
SOX2-OT-202ENST00000461063 UBE4BO95155 1302 aa9.39□□□□□ -0.91
SOX2-OT-202ENST00000461063 CCDC163A0A0D9SF12 145 aa9.39□□□□□ -0.91
SOX2-OT-202ENST00000461063 C2orf78A6NCI8 922 aa9.39□□□□□ -0.91
SOX2-OT-202ENST00000461063 CLIC2O15247 247 aa9.39□□□□□ -0.91
SOX2-OT-202ENST00000461063 POLR2DO15514 142 aaKnown RBP9.39□□□□□ -0.91
SOX2-OT-202ENST00000461063 ATG13O75143 517 aa9.39□□□□□ -0.91
SOX2-OT-202ENST00000461063 RNF40O75150 1001 aa9.39□□□□□ -0.91
SOX2-OT-202ENST00000461063 DLATP10515 647 aaKnown RBP9.39□□□□□ -0.91
SOX2-OT-202ENST00000461063 TNNI1P19237 187 aa9.39□□□□□ -0.91
SOX2-OT-202ENST00000461063 DRD1P21728 446 aa9.39□□□□□ -0.91
SOX2-OT-202ENST00000461063 BDNFP23560 247 aa9.39□□□□□ -0.91
SOX2-OT-202ENST00000461063 CASP1P29466 404 aa9.39□□□□□ -0.91
SOX2-OT-202ENST00000461063 GJA4P35212 333 aa9.39□□□□□ -0.91
SOX2-OT-202ENST00000461063 PXNP49023 591 aaPredicted RBP9.39□□□□□ -0.91
SOX2-OT-202ENST00000461063 GALK1P51570 392 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms