RNA–Protein interactions for RNA: ENST00000461047.2

NUP98-208, Transcript of nucleoporin 98, humanhuman

TSL 3

Gene NUP98, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-208ENST00000461047 CXCL8P10145 99 aa6.39□□□□□ -1.39
NUP98-208ENST00000461047 FGFR1P11362 822 aa6.39□□□□□ -1.39
NUP98-208ENST00000461047 ATICP31939 592 aa6.39□□□□□ -1.39
NUP98-208ENST00000461047 TNFSF9P41273 254 aa6.39□□□□□ -1.39
NUP98-208ENST00000461047 SCNN1GP51170 649 aa6.39□□□□□ -1.39
NUP98-208ENST00000461047 PMS1P54277 932 aaKnown RBP6.39□□□□□ -1.39
NUP98-208ENST00000461047 BFSP1Q12934 665 aa6.39□□□□□ -1.39
NUP98-208ENST00000461047 KCNJ12Q14500 433 aa6.39□□□□□ -1.39
NUP98-208ENST00000461047 MAN2A1Q16706 1144 aa6.39□□□□□ -1.39
NUP98-208ENST00000461047 SGSM1Q2NKQ1 1148 aa6.39□□□□□ -1.39
NUP98-208ENST00000461047 SEZ6Q53EL9 994 aa6.39□□□□□ -1.39
NUP98-208ENST00000461047 SGO2Q562F6 1265 aa6.39□□□□□ -1.39
NUP98-208ENST00000461047 XKR4Q5GH76 650 aa6.39□□□□□ -1.39
NUP98-208ENST00000461047 TCP11X2Q5H9J9 407 aa6.39□□□□□ -1.39
NUP98-208ENST00000461047 DCAF17Q5H9S7 520 aaPredicted RBP6.39□□□□□ -1.39
NUP98-208ENST00000461047 RASIP1Q5U651 963 aa6.39□□□□□ -1.39
NUP98-208ENST00000461047 KRT39Q6A163 491 aa6.39□□□□□ -1.39
NUP98-208ENST00000461047 JADE1Q6IE81 842 aa6.39□□□□□ -1.39
NUP98-208ENST00000461047 PDXDC1Q6P996 788 aa6.39□□□□□ -1.39
NUP98-208ENST00000461047 PAOXQ6QHF9 649 aa6.39□□□□□ -1.39
NUP98-208ENST00000461047 CRELD2Q6UXH1 353 aaPredicted RBP6.39□□□□□ -1.39
NUP98-208ENST00000461047 ALKAL1Q6UXT8 129 aa6.39□□□□□ -1.39
NUP98-208ENST00000461047 C11orf57Q6ZUT1 292 aaPredicted RBP6.39□□□□□ -1.39
NUP98-208ENST00000461047 ZC3H3Q8IXZ2 948 aaKnown RBP6.39□□□□□ -1.39
NUP98-208ENST00000461047 SHKBP1Q8TBC3 707 aa6.39□□□□□ -1.39
NUP98-208ENST00000461047 PARD3BQ8TEW8 1205 aa6.39□□□□□ -1.39
NUP98-208ENST00000461047 TAF4BQ92750 862 aa6.39□□□□□ -1.39
NUP98-208ENST00000461047 CNOT6LQ96LI5 555 aaKnown RBP6.39□□□□□ -1.39
NUP98-208ENST00000461047 FAM81BQ96LP2 452 aa6.39□□□□□ -1.39
NUP98-208ENST00000461047 ZNF560Q96MR9 790 aa6.39□□□□□ -1.39
NUP98-208ENST00000461047 ZNF558Q96NG5 402 aa6.39□□□□□ -1.39
NUP98-208ENST00000461047 CGRRF1Q99675 332 aa6.39□□□□□ -1.39
NUP98-208ENST00000461047 DUSP9Q99956 384 aaKnown RBP6.39□□□□□ -1.39
NUP98-208ENST00000461047 TUBGCP2Q9BSJ2 902 aa6.39□□□□□ -1.39
NUP98-208ENST00000461047 OSBPL7Q9BZF2 842 aa6.39□□□□□ -1.39
NUP98-208ENST00000461047 SLC28A3Q9HAS3 691 aa6.39□□□□□ -1.39
NUP98-208ENST00000461047 TMEM8AQ9HCN3 771 aa6.39□□□□□ -1.39
NUP98-208ENST00000461047 PDE11AQ9HCR9 933 aa6.39□□□□□ -1.39
NUP98-208ENST00000461047 RAD18Q9NS91 495 aa6.39□□□□□ -1.39
NUP98-208ENST00000461047 INTS13Q9NVM9 706 aa6.39□□□□□ -1.39
NUP98-208ENST00000461047 FANCLQ9NW38 375 aa6.39□□□□□ -1.39
NUP98-208ENST00000461047 ITGA11Q9UKX5 1188 aa6.39□□□□□ -1.39
NUP98-208ENST00000461047 SSX2IPQ9Y2D8 614 aa6.39□□□□□ -1.39
NUP98-208ENST00000461047 FAN1Q9Y2M0 1017 aa6.39□□□□□ -1.39
NUP98-208ENST00000461047 FAM95CA0A1B0GW59 222 aa6.38□□□□□ -1.39
NUP98-208ENST00000461047 HUS1O60921 280 aa6.38□□□□□ -1.39
NUP98-208ENST00000461047 ZC3H11AO75152 810 aaKnown RBP eCLIP6.38□□□□□ -1.39
NUP98-208ENST00000461047 EDN1P05305 212 aa6.38□□□□□ -1.39
NUP98-208ENST00000461047 OR1G1P47890 313 aa6.38□□□□□ -1.39
NUP98-208ENST00000461047 GRIA4P48058 902 aa6.38□□□□□ -1.39
NUP98-208ENST00000461047 CASP4P49662 377 aa6.38□□□□□ -1.39
NUP98-208ENST00000461047 YWHAEP62258 255 aaKnown RBP6.38□□□□□ -1.39
NUP98-208ENST00000461047 DEFB103AP81534 67 aa6.38□□□□□ -1.39
NUP98-208ENST00000461047 HTRA4P83105 476 aaPredicted RBP6.38□□□□□ -1.39
NUP98-208ENST00000461047 SMAD3P84022 425 aaKnown RBP6.38□□□□□ -1.39
NUP98-208ENST00000461047 ORC1Q13415 861 aa6.38□□□□□ -1.39
NUP98-208ENST00000461047 POU4F3Q15319 338 aa6.38□□□□□ -1.39
NUP98-208ENST00000461047 SPRED3Q2MJR0 410 aa6.38□□□□□ -1.39
NUP98-208ENST00000461047 SV2CQ496J9 727 aa6.38□□□□□ -1.39
NUP98-208ENST00000461047 VWA3BQ502W6 1294 aa6.38□□□□□ -1.39
NUP98-208ENST00000461047 PAN2Q504Q3 1202 aaKnown RBP6.38□□□□□ -1.39
NUP98-208ENST00000461047 CLLU1OSQ5K130 101 aa6.38□□□□□ -1.39
NUP98-208ENST00000461047 C9orf50Q5SZB4 431 aa6.38□□□□□ -1.39
NUP98-208ENST00000461047 KIAA0319Q5VV43 1072 aa6.38□□□□□ -1.39
NUP98-208ENST00000461047 KIAA1841Q6NSI8 718 aa6.38□□□□□ -1.39
NUP98-208ENST00000461047 GBP6Q6ZN66 633 aa6.38□□□□□ -1.39
NUP98-208ENST00000461047 LRRC55Q6ZSA7 311 aa6.38□□□□□ -1.39
NUP98-208ENST00000461047 TRAPPC11Q7Z392 1133 aa6.38□□□□□ -1.39
NUP98-208ENST00000461047 METTL23Q86XA0 190 aa6.38□□□□□ -1.39
NUP98-208ENST00000461047 FMNL3Q8IVF7 1028 aa6.38□□□□□ -1.39
NUP98-208ENST00000461047 TTC39CQ8N584 583 aa6.38□□□□□ -1.39
NUP98-208ENST00000461047 LRRC52Q8N7C0 313 aa6.38□□□□□ -1.39
NUP98-208ENST00000461047 FBXL13Q8NEE6 735 aa6.38□□□□□ -1.39
NUP98-208ENST00000461047 LINC01599Q8WXQ3 324 aa6.38□□□□□ -1.39
NUP98-208ENST00000461047 ZNF689Q96CS4 500 aaPredicted RBP6.38□□□□□ -1.39
NUP98-208ENST00000461047 EEF2KMTQ96G04 330 aa6.38□□□□□ -1.39
NUP98-208ENST00000461047 TMEM169Q96HH4 297 aa6.38□□□□□ -1.39
NUP98-208ENST00000461047 FAXDC2Q96IV6 333 aa6.38□□□□□ -1.39
NUP98-208ENST00000461047 CASD1Q96PB1 797 aa6.38□□□□□ -1.39
NUP98-208ENST00000461047 PPP1R10Q96QC0 940 aaKnown RBP6.38□□□□□ -1.39
NUP98-208ENST00000461047 TGS1Q96RS0 853 aaKnown RBP6.38□□□□□ -1.39
NUP98-208ENST00000461047 TCF12Q99081 682 aa6.38□□□□□ -1.39
NUP98-208ENST00000461047 CORO1BQ9BR76 489 aa6.38□□□□□ -1.39
NUP98-208ENST00000461047 FUCA2Q9BTY2 467 aa6.38□□□□□ -1.39
NUP98-208ENST00000461047 HAPLN2Q9GZV7 340 aa6.38□□□□□ -1.39
NUP98-208ENST00000461047 IKZF4Q9H2S9 585 aa6.38□□□□□ -1.39
NUP98-208ENST00000461047 MMRN2Q9H8L6 949 aa6.38□□□□□ -1.39
NUP98-208ENST00000461047 CBX8Q9HC52 389 aa6.38□□□□□ -1.39
NUP98-208ENST00000461047 SAMSN1Q9NSI8 373 aaKnown RBP6.38□□□□□ -1.39
NUP98-208ENST00000461047 TBC1D13Q9NVG8 400 aa6.38□□□□□ -1.39
NUP98-208ENST00000461047 SPG21Q9NZD8 308 aa6.38□□□□□ -1.39
NUP98-208ENST00000461047 DSEQ9UL01 958 aa6.38□□□□□ -1.39
NUP98-208ENST00000461047 ARID2Q68CP9 1835 aa6.38□□□□□ -1.39
NUP98-208ENST00000461047 GTPBP10A4D1E9 387 aaKnown RBP6.37□□□□□ -1.39
NUP98-208ENST00000461047 LRRIQ3A6PVS8 624 aaPredicted RBP6.37□□□□□ -1.39
NUP98-208ENST00000461047 GOLGA6L6A8MZA4 724 aa6.37□□□□□ -1.39
NUP98-208ENST00000461047 H7C4K7 107 aa6.37□□□□□ -1.39
NUP98-208ENST00000461047 PMM2O15305 246 aa6.37□□□□□ -1.39
NUP98-208ENST00000461047 FAM189A1O60320 539 aa6.37□□□□□ -1.39
NUP98-208ENST00000461047 B3GAT3O94766 335 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms