RNA–Protein interactions for RNA: ENST00000460601.5

NELFCD-201, Transcript of negative elongation factor complex member C/D, humanhuman

TSL 1 (best)

Gene NELFCD, Length 2,137 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFCD-201ENST00000460601 CDH9Q9ULB4 789 aa17.77■□□□□ 0.44
NELFCD-201ENST00000460601 GRAP2O75791 330 aa17.77■□□□□ 0.43
NELFCD-201ENST00000460601 BCAT1P54687 386 aa17.77■□□□□ 0.43
NELFCD-201ENST00000460601 TAF5Q15542 800 aa17.77■□□□□ 0.43
NELFCD-201ENST00000460601 PPP1R15BQ5SWA1 713 aa17.77■□□□□ 0.43
NELFCD-201ENST00000460601 CLEC20AQ6ZU45 233 aa17.77■□□□□ 0.43
NELFCD-201ENST00000460601 FAM183BPQ6ZVS7 135 aa17.77■□□□□ 0.43
NELFCD-201ENST00000460601 ZNF365Q70YC5 407 aa17.77■□□□□ 0.43
NELFCD-201ENST00000460601 TAS1R1Q7RTX1 841 aa17.77■□□□□ 0.43
NELFCD-201ENST00000460601 SYCE1Q8N0S2 351 aa17.77■□□□□ 0.43
NELFCD-201ENST00000460601 KRT35Q92764 455 aa17.77■□□□□ 0.43
NELFCD-201ENST00000460601 MIS12Q9H081 205 aa17.77■□□□□ 0.43
NELFCD-201ENST00000460601 CWH43Q9H720 699 aa17.77■□□□□ 0.43
NELFCD-201ENST00000460601 METTL5Q9NRN9 209 aaKnown RBP17.77■□□□□ 0.43
NELFCD-201ENST00000460601 CXXC1Q9P0U4 656 aaPredicted RBP17.77■□□□□ 0.43
NELFCD-201ENST00000460601 PRKAG2Q9UGJ0 569 aa17.77■□□□□ 0.43
NELFCD-201ENST00000460601 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.77■□□□□ 0.439e-6■■□□□ 14.3
NELFCD-201ENST00000460601 PCDHB8Q9UN66 801 aa17.77■□□□□ 0.43
NELFCD-201ENST00000460601 V9GYY5 206 aaPredicted RBP17.77■□□□□ 0.43
NELFCD-201ENST00000460601 PTPRSQ13332 1948 aa17.76■□□□□ 0.43
NELFCD-201ENST00000460601 ZBBXA8MT70 800 aa17.76■□□□□ 0.43
NELFCD-201ENST00000460601 PDE2AO00408 941 aaPredicted RBP17.76■□□□□ 0.43
NELFCD-201ENST00000460601 AMHP03971 560 aa17.76■□□□□ 0.43
NELFCD-201ENST00000460601 FAM163BP0C2L3 166 aa17.76■□□□□ 0.43
NELFCD-201ENST00000460601 PCSK1P29120 753 aa17.76■□□□□ 0.43
NELFCD-201ENST00000460601 RFC1P35251 1148 aaPredicted RBP17.76■□□□□ 0.43
NELFCD-201ENST00000460601 GABRB2P47870 512 aa17.76■□□□□ 0.43
NELFCD-201ENST00000460601 MAP3K7CLP57077 242 aa17.76■□□□□ 0.43
NELFCD-201ENST00000460601 NAA30Q147X3 362 aaPredicted RBP17.76■□□□□ 0.43
NELFCD-201ENST00000460601 INTS6LQ5JSJ4 861 aaKnown RBP17.76■□□□□ 0.43
NELFCD-201ENST00000460601 C11orf63Q6NUN7 778 aa17.76■□□□□ 0.43
NELFCD-201ENST00000460601 FEZF2Q8TBJ5 459 aa17.76■□□□□ 0.43
NELFCD-201ENST00000460601 MYCBPAPQ8TBZ2 947 aa17.76■□□□□ 0.43
NELFCD-201ENST00000460601 TSC1Q92574 1164 aa17.76■□□□□ 0.43
NELFCD-201ENST00000460601 MYLPFQ96A32 169 aa17.76■□□□□ 0.43
NELFCD-201ENST00000460601 ZNF689Q96CS4 500 aaPredicted RBP17.76■□□□□ 0.43
NELFCD-201ENST00000460601 HES6Q96HZ4 224 aa17.76■□□□□ 0.43
NELFCD-201ENST00000460601 PKMYT1Q99640 499 aa17.76■□□□□ 0.43
NELFCD-201ENST00000460601 ACBD6Q9BR61 282 aa17.76■□□□□ 0.43
NELFCD-201ENST00000460601 RC3H2Q9HBD1 1191 aaKnown RBP17.76■□□□□ 0.43
NELFCD-201ENST00000460601 MRPL47Q9HD33 250 aaKnown RBP17.76■□□□□ 0.43
NELFCD-201ENST00000460601 IL23AQ9NPF7 189 aa17.76■□□□□ 0.43
NELFCD-201ENST00000460601 DSEQ9UL01 958 aa17.76■□□□□ 0.43
NELFCD-201ENST00000460601 SCINQ9Y6U3 715 aa17.76■□□□□ 0.43
NELFCD-201ENST00000460601 CHD7Q9P2D1 2997 aa17.76■□□□□ 0.43
NELFCD-201ENST00000460601 MYO1FO00160 1098 aa17.75■□□□□ 0.43
NELFCD-201ENST00000460601 KCNK3O14649 394 aa17.75■□□□□ 0.43
NELFCD-201ENST00000460601 LCP1P13796 627 aa17.75■□□□□ 0.43
NELFCD-201ENST00000460601 RNASE9P60153 205 aaKnown RBP17.75■□□□□ 0.43
NELFCD-201ENST00000460601 RPS6KA1Q15418 735 aa17.75■□□□□ 0.43
NELFCD-201ENST00000460601 FAM102AQ5T9C2 384 aaPredicted RBP17.75■□□□□ 0.43
NELFCD-201ENST00000460601 DCAF12L1Q5VU92 463 aa17.75■□□□□ 0.43
NELFCD-201ENST00000460601 PPP1R2P3Q6NXS1 205 aa17.75■□□□□ 0.43
NELFCD-201ENST00000460601 FUT10Q6P4F1 479 aa17.75■□□□□ 0.43
NELFCD-201ENST00000460601 DCUN1D2Q6PH85 259 aa17.75■□□□□ 0.43
NELFCD-201ENST00000460601 FAM35AQ86V20 835 aa17.75■□□□□ 0.43
NELFCD-201ENST00000460601 PIGZQ86VD9 579 aa17.75■□□□□ 0.43
NELFCD-201ENST00000460601 ALG3Q92685 438 aa17.75■□□□□ 0.43
NELFCD-201ENST00000460601 DUSP16Q9BY84 665 aa17.75■□□□□ 0.43
NELFCD-201ENST00000460601 AMFRQ9UKV5 643 aa17.75■□□□□ 0.43
NELFCD-201ENST00000460601 STRIP2Q9ULQ0 834 aa17.75■□□□□ 0.43
NELFCD-201ENST00000460601 TMEM191CA6NGB0 347 aa17.75■□□□□ 0.43
NELFCD-201ENST00000460601 PAPSS1O43252 624 aaPredicted RBP17.75■□□□□ 0.43
NELFCD-201ENST00000460601 KRT3P12035 628 aa17.75■□□□□ 0.43
NELFCD-201ENST00000460601 TCF4P15884 667 aa17.75■□□□□ 0.43
NELFCD-201ENST00000460601 NPR3P17342 541 aa17.75■□□□□ 0.43
NELFCD-201ENST00000460601 TYMPP19971 482 aa17.75■□□□□ 0.43
NELFCD-201ENST00000460601 ALDH7A1P49419 539 aaKnown RBP17.75■□□□□ 0.43
NELFCD-201ENST00000460601 RTP2Q5QGT7 225 aa17.75■□□□□ 0.43
NELFCD-201ENST00000460601 VARS2Q5ST30 1063 aaKnown RBP17.75■□□□□ 0.43
NELFCD-201ENST00000460601 OR6B2Q6IFH4 312 aa17.75■□□□□ 0.43
NELFCD-201ENST00000460601 CREG2Q8IUH2 290 aa17.75■□□□□ 0.43
NELFCD-201ENST00000460601 IPO4Q8TEX9 1081 aaKnown RBP17.75■□□□□ 0.43
NELFCD-201ENST00000460601 NDRG1Q92597 394 aaKnown RBP17.75■□□□□ 0.43
NELFCD-201ENST00000460601 SELENOOQ9BVL4 669 aa17.75■□□□□ 0.43
NELFCD-201ENST00000460601 SLC4A5Q9BY07 1137 aa17.75■□□□□ 0.43
NELFCD-201ENST00000460601 ZMYND8Q9ULU4 1186 aaPredicted RBP17.75■□□□□ 0.43
NELFCD-201ENST00000460601 DDX3YO15523 660 aaKnown RBP17.74■□□□□ 0.43
NELFCD-201ENST00000460601 TRAPPC3O43617 180 aa17.74■□□□□ 0.43
NELFCD-201ENST00000460601 SPOPO43791 374 aa17.74■□□□□ 0.43
NELFCD-201ENST00000460601 BDNFP23560 247 aa17.74■□□□□ 0.43
NELFCD-201ENST00000460601 PLCB3Q01970 1234 aa17.74■□□□□ 0.43
NELFCD-201ENST00000460601 TRNP1Q6NT89 227 aa17.74■□□□□ 0.43
NELFCD-201ENST00000460601 AADACL2Q6P093 401 aa17.74■□□□□ 0.43
NELFCD-201ENST00000460601 FAM171BQ6P995 826 aa17.74■□□□□ 0.43
NELFCD-201ENST00000460601 GPRIN1Q7Z2K8 1008 aa17.74■□□□□ 0.43
NELFCD-201ENST00000460601 ZMIZ2Q8NF64 920 aa17.74■□□□□ 0.43
NELFCD-201ENST00000460601 SMOQ99835 787 aa17.74■□□□□ 0.43
NELFCD-201ENST00000460601 COLEC11Q9BWP8 271 aa17.74■□□□□ 0.43
NELFCD-201ENST00000460601 VN1R3Q9BXE9 311 aa17.74■□□□□ 0.43
NELFCD-201ENST00000460601 SF3B1O75533 1304 aaKnown RBP eCLIP17.74■□□□□ 0.434e-6■■■■□ 21
NELFCD-201ENST00000460601 F8VP50 259 aa17.74■□□□□ 0.43
NELFCD-201ENST00000460601 AP1G2O75843 785 aa17.74■□□□□ 0.43
NELFCD-201ENST00000460601 PLA2G4AP47712 749 aa17.74■□□□□ 0.43
NELFCD-201ENST00000460601 FPGSQ05932 587 aa17.74■□□□□ 0.43
NELFCD-201ENST00000460601 SPOUT1Q5T280 376 aaKnown RBP17.74■□□□□ 0.43
NELFCD-201ENST00000460601 OLFML1Q6UWY5 402 aa17.74■□□□□ 0.43
NELFCD-201ENST00000460601 TMEM110Q86TL2 294 aa17.74■□□□□ 0.43
NELFCD-201ENST00000460601 MYRIPQ8NFW9 859 aa17.74■□□□□ 0.43
NELFCD-201ENST00000460601 CD101Q93033 1021 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms