RNA–Protein interactions for RNA: ENST00000460170.2

PTPRU-205, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,337 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-205ENST00000460170 VCPP55072 806 aaKnown RBP15.37■□□□□ 0.05
PTPRU-205ENST00000460170 TMEM176AQ96HP8 235 aa15.37■□□□□ 0.05
PTPRU-205ENST00000460170 PAFAH2Q99487 392 aa15.37■□□□□ 0.05
PTPRU-205ENST00000460170 PCDH9Q9HC56 1237 aa15.37■□□□□ 0.05
PTPRU-205ENST00000460170 RASSF10A6NK89 507 aa15.37■□□□□ 0.05
PTPRU-205ENST00000460170 TISP43B9A030 160 aa15.37■□□□□ 0.05
PTPRU-205ENST00000460170 O00370 1275 aa15.37■□□□□ 0.05
PTPRU-205ENST00000460170 CSPG5O95196 566 aa15.37■□□□□ 0.05
PTPRU-205ENST00000460170 GFAPP14136 432 aa15.37■□□□□ 0.05
PTPRU-205ENST00000460170 TARSP26639 723 aaKnown RBP15.37■□□□□ 0.05
PTPRU-205ENST00000460170 ERO1BQ86YB8 467 aa15.37■□□□□ 0.05
PTPRU-205ENST00000460170 FAM172AQ8WUF8 416 aa15.37■□□□□ 0.05
PTPRU-205ENST00000460170 TSPAN17Q96FV3 270 aa15.37■□□□□ 0.05
PTPRU-205ENST00000460170 KDM4CQ9H3R0 1056 aa15.37■□□□□ 0.05
PTPRU-205ENST00000460170 REXO2Q9Y3B8 237 aaKnown RBP15.37■□□□□ 0.05
PTPRU-205ENST00000460170 CDY2AQ9Y6F7 541 aa15.37■□□□□ 0.05
PTPRU-205ENST00000460170 CDY1Q9Y6F8 540 aa15.37■□□□□ 0.05
PTPRU-205ENST00000460170 NFAT5O94916 1531 aa15.37■□□□□ 0.05
PTPRU-205ENST00000460170 CETPP11597 493 aa15.36■□□□□ 0.05
PTPRU-205ENST00000460170 SKOR1P84550 965 aa15.36■□□□□ 0.05
PTPRU-205ENST00000460170 AMPD2Q01433 879 aa15.36■□□□□ 0.05
PTPRU-205ENST00000460170 FBXO16Q8IX29 292 aaPredicted RBP15.36■□□□□ 0.05
PTPRU-205ENST00000460170 ELMO3Q96BJ8 720 aa15.36■□□□□ 0.05
PTPRU-205ENST00000460170 PABPC5Q96DU9 382 aaKnown RBP15.36■□□□□ 0.05
PTPRU-205ENST00000460170 NQO1P15559 274 aaKnown RBP15.36■□□□□ 0.05
PTPRU-205ENST00000460170 RAP1GAPP47736 663 aa15.36■□□□□ 0.05
PTPRU-205ENST00000460170 AMHR2Q16671 573 aa15.36■□□□□ 0.05
PTPRU-205ENST00000460170 IMPG1Q17R60 797 aa15.36■□□□□ 0.05
PTPRU-205ENST00000460170 NAPEPLDQ6IQ20 393 aa15.36■□□□□ 0.05
PTPRU-205ENST00000460170 KIRREL3Q8IZU9 778 aa15.36■□□□□ 0.05
PTPRU-205ENST00000460170 EPS8L1Q8TE68 723 aa15.36■□□□□ 0.05
PTPRU-205ENST00000460170 SHOC2Q9UQ13 582 aa15.36■□□□□ 0.05
PTPRU-205ENST00000460170 ANKRD63C9JTQ0 380 aa15.36■□□□□ 0.05
PTPRU-205ENST00000460170 M0QYT0 321 aa15.36■□□□□ 0.05
PTPRU-205ENST00000460170 MGEA5O60502 916 aa15.36■□□□□ 0.05
PTPRU-205ENST00000460170 MCF2P10911 925 aa15.36■□□□□ 0.05
PTPRU-205ENST00000460170 OAZ1P54368 228 aa15.36■□□□□ 0.05
PTPRU-205ENST00000460170 RXFP2Q8WXD0 754 aa15.36■□□□□ 0.05
PTPRU-205ENST00000460170 PPP1R2P1Q96PQ5 205 aa15.36■□□□□ 0.05
PTPRU-205ENST00000460170 MROH8Q9H579 483 aa15.36■□□□□ 0.05
PTPRU-205ENST00000460170 DDX20Q9UHI6 824 aaKnown RBP15.36■□□□□ 0.05
PTPRU-205ENST00000460170 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.36■□□□□ 0.05
PTPRU-205ENST00000460170 PIK3C2AO00443 1686 aa15.36■□□□□ 0.05
PTPRU-205ENST00000460170 E2F8A0AVK6 867 aa15.36■□□□□ 0.05
PTPRU-205ENST00000460170 CYP2B6P20813 491 aa15.36■□□□□ 0.05
PTPRU-205ENST00000460170 TNFRSF8P28908 595 aa15.36■□□□□ 0.05
PTPRU-205ENST00000460170 EPHB2P29323 1055 aa15.36■□□□□ 0.05
PTPRU-205ENST00000460170 ATICP31939 592 aa15.36■□□□□ 0.05
PTPRU-205ENST00000460170 KLC1Q07866 573 aa15.36■□□□□ 0.05
PTPRU-205ENST00000460170 PRPF39Q86UA1 669 aaKnown RBP15.36■□□□□ 0.05
PTPRU-205ENST00000460170 KAT5Q92993 513 aa15.36■□□□□ 0.05
PTPRU-205ENST00000460170 ELMO2Q96JJ3 720 aa15.36■□□□□ 0.05
PTPRU-205ENST00000460170 TSPYL2Q9H2G4 693 aaPredicted RBP15.36■□□□□ 0.05
PTPRU-205ENST00000460170 GPATCH2LQ9NWQ4 482 aa15.36■□□□□ 0.05
PTPRU-205ENST00000460170 KLK14Q9P0G3 267 aa15.36■□□□□ 0.05
PTPRU-205ENST00000460170 HEY2Q9UBP5 337 aa15.36■□□□□ 0.05
PTPRU-205ENST00000460170 LRRC8EQ6NSJ5 796 aa15.36■□□□□ 0.05
PTPRU-205ENST00000460170 TAS2R42Q7RTR8 314 aa15.36■□□□□ 0.05
PTPRU-205ENST00000460170 CCNJLQ8IV13 435 aa15.36■□□□□ 0.05
PTPRU-205ENST00000460170 MSL3Q8N5Y2 521 aaKnown RBP15.36■□□□□ 0.05
PTPRU-205ENST00000460170 EGFL8Q99944 293 aa15.36■□□□□ 0.05
PTPRU-205ENST00000460170 KCTD10Q9H3F6 313 aa15.36■□□□□ 0.05
PTPRU-205ENST00000460170 DNAJC18Q9H819 358 aa15.36■□□□□ 0.05
PTPRU-205ENST00000460170 SPON1Q9HCB6 807 aa15.36■□□□□ 0.05
PTPRU-205ENST00000460170 HACD3Q9P035 362 aa15.36■□□□□ 0.05
PTPRU-205ENST00000460170 BTNL10A8MVZ5 291 aa15.35■□□□□ 0.05
PTPRU-205ENST00000460170 E2F6O75461 281 aa15.35■□□□□ 0.05
PTPRU-205ENST00000460170 CXCL8P10145 99 aa15.35■□□□□ 0.05
PTPRU-205ENST00000460170 ZPBP2Q6X784 338 aa15.35■□□□□ 0.05
PTPRU-205ENST00000460170 IPMKQ8NFU5 416 aa15.35■□□□□ 0.05
PTPRU-205ENST00000460170 PGM2Q96G03 612 aa15.35■□□□□ 0.05
PTPRU-205ENST00000460170 CATSPERBQ9H7T0 1116 aa15.35■□□□□ 0.05
PTPRU-205ENST00000460170 RPS6KL1Q9Y6S9 549 aa15.35■□□□□ 0.05
PTPRU-205ENST00000460170 ENO3P13929 434 aaPredicted RBP15.35■□□□□ 0.05
PTPRU-205ENST00000460170 DLG4P78352 724 aa15.35■□□□□ 0.05
PTPRU-205ENST00000460170 CATSPER1Q8NEC5 780 aa15.35■□□□□ 0.05
PTPRU-205ENST00000460170 ETNPPLQ8TBG4 499 aa15.35■□□□□ 0.05
PTPRU-205ENST00000460170 DNAJC9Q8WXX5 260 aa15.35■□□□□ 0.05
PTPRU-205ENST00000460170 OLFM3Q96PB7 478 aa15.35■□□□□ 0.05
PTPRU-205ENST00000460170 WDR18Q9BV38 432 aa15.35■□□□□ 0.05
PTPRU-205ENST00000460170 CPA2P48052 419 aa15.35■□□□□ 0.05
PTPRU-205ENST00000460170 CALML6Q8TD86 181 aa15.35■□□□□ 0.05
PTPRU-205ENST00000460170 SPATC1LQ9H0A9 340 aa15.35■□□□□ 0.05
PTPRU-205ENST00000460170 DDIT4Q9NX09 232 aa15.35■□□□□ 0.05
PTPRU-205ENST00000460170 TAS2R14Q9NYV8 317 aa15.35■□□□□ 0.05
PTPRU-205ENST00000460170 POLIQ9UNA4 740 aa15.35■□□□□ 0.05
PTPRU-205ENST00000460170 CACNA1FO60840 1977 aa15.35■□□□□ 0.05
PTPRU-205ENST00000460170 DNAJC8O75937 253 aaPredicted RBP15.35■□□□□ 0.05
PTPRU-205ENST00000460170 ARHGAP18Q8N392 663 aa15.35■□□□□ 0.05
PTPRU-205ENST00000460170 ING2Q9H160 280 aa15.35■□□□□ 0.05
PTPRU-205ENST00000460170 USP20Q9Y2K6 914 aa15.35■□□□□ 0.05
PTPRU-205ENST00000460170 A0A087WZ62 844 aa15.34■□□□□ 0.05
PTPRU-205ENST00000460170 DNALI1O14645 258 aaPredicted RBP15.34■□□□□ 0.05
PTPRU-205ENST00000460170 ADCY3O60266 1144 aa15.34■□□□□ 0.05
PTPRU-205ENST00000460170 SYF2O95926 243 aaKnown RBP15.34■□□□□ 0.05
PTPRU-205ENST00000460170 RNF219Q5W0B1 726 aaPredicted RBP15.34■□□□□ 0.05
PTPRU-205ENST00000460170 SLC26A11Q86WA9 606 aa15.34■□□□□ 0.05
PTPRU-205ENST00000460170 FDXACB1Q9BRP7 624 aaPredicted RBP15.34■□□□□ 0.05
PTPRU-205ENST00000460170 NAT9Q9BTE0 207 aa15.34■□□□□ 0.05
PTPRU-205ENST00000460170 SLC39A10Q9ULF5 831 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 96.3 ms