RNA–Protein interactions for RNA: ENST00000460064.1

CCDC50-203, Transcript of coiled-coil domain containing 50, humanhuman

TSL 2

Gene CCDC50, Length 420 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-203ENST00000460064 TMEM95Q3KNT9 176 aa6.47□□□□□ -1.37
CCDC50-203ENST00000460064 ARHGAP40Q5TG30 622 aa6.47□□□□□ -1.37
CCDC50-203ENST00000460064 SFRP4Q6FHJ7 346 aaPredicted RBP6.47□□□□□ -1.37
CCDC50-203ENST00000460064 USP17L6PQ6QN14 398 aa6.47□□□□□ -1.37
CCDC50-203ENST00000460064 KIAA0408Q6ZU52 694 aa6.47□□□□□ -1.37
CCDC50-203ENST00000460064 MICALCLQ6ZW33 695 aa6.47□□□□□ -1.37
CCDC50-203ENST00000460064 ADGRG5Q8IZF4 528 aa6.47□□□□□ -1.37
CCDC50-203ENST00000460064 SPARTQ8N0X7 666 aa6.47□□□□□ -1.37
CCDC50-203ENST00000460064 BOD1Q96IK1 185 aa6.47□□□□□ -1.37
CCDC50-203ENST00000460064 RMDN3Q96TC7 470 aa6.47□□□□□ -1.37
CCDC50-203ENST00000460064 NELL2Q99435 816 aa6.47□□□□□ -1.37
CCDC50-203ENST00000460064 SLC46A2Q9BY10 475 aa6.47□□□□□ -1.37
CCDC50-203ENST00000460064 ALOXE3Q9BYJ1 711 aa6.47□□□□□ -1.37
CCDC50-203ENST00000460064 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.47□□□□□ -1.37
CCDC50-203ENST00000460064 FAM83DQ9H4H8 585 aa6.47□□□□□ -1.37
CCDC50-203ENST00000460064 AURKAIP1Q9NWT8 199 aaPredicted RBP6.47□□□□□ -1.37
CCDC50-203ENST00000460064 DACT1Q9NYF0 836 aa6.47□□□□□ -1.37
CCDC50-203ENST00000460064 NDRG4Q9ULP0 352 aaKnown RBP6.47□□□□□ -1.37
CCDC50-203ENST00000460064 PCDHGB3Q9Y5G1 929 aa6.47□□□□□ -1.37
CCDC50-203ENST00000460064 A0A0B4J269 797 aa6.46□□□□□ -1.38
CCDC50-203ENST00000460064 GAGE12BA1L429 117 aa6.46□□□□□ -1.38
CCDC50-203ENST00000460064 GAGE12HA6NDE8 117 aa6.46□□□□□ -1.38
CCDC50-203ENST00000460064 AQP12BA6NM10 295 aa6.46□□□□□ -1.38
CCDC50-203ENST00000460064 TLR5O60602 858 aa6.46□□□□□ -1.38
CCDC50-203ENST00000460064 NDUFA10O95299 355 aa6.46□□□□□ -1.38
CCDC50-203ENST00000460064 KCNA3P22001 575 aa6.46□□□□□ -1.38
CCDC50-203ENST00000460064 CD6P30203 668 aa6.46□□□□□ -1.38
CCDC50-203ENST00000460064 SELENOPP49908 381 aa6.46□□□□□ -1.38
CCDC50-203ENST00000460064 RENBPP51606 427 aa6.46□□□□□ -1.38
CCDC50-203ENST00000460064 TUBB3Q13509 450 aa6.46□□□□□ -1.38
CCDC50-203ENST00000460064 TOB2Q14106 344 aaPredicted RBP6.46□□□□□ -1.38
CCDC50-203ENST00000460064 PTK2BQ14289 1009 aa6.46□□□□□ -1.38
CCDC50-203ENST00000460064 MAPKAPK3Q16644 382 aa6.46□□□□□ -1.38
CCDC50-203ENST00000460064 GEN1Q17RS7 908 aa6.46□□□□□ -1.38
CCDC50-203ENST00000460064 ARHGAP15Q53QZ3 475 aa6.46□□□□□ -1.38
CCDC50-203ENST00000460064 RBM20Q5T481 1227 aaKnown RBP6.46□□□□□ -1.38
CCDC50-203ENST00000460064 RAP1GAP2Q684P5 730 aa6.46□□□□□ -1.38
CCDC50-203ENST00000460064 NACC2Q96BF6 587 aa6.46□□□□□ -1.38
CCDC50-203ENST00000460064 CXorf36Q9H7Y0 433 aa6.46□□□□□ -1.38
CCDC50-203ENST00000460064 GALNT9Q9HCQ5 603 aa6.46□□□□□ -1.38
CCDC50-203ENST00000460064 IGSF9Q9P2J2 1179 aa6.46□□□□□ -1.38
CCDC50-203ENST00000460064 HPSEQ9Y251 543 aa6.46□□□□□ -1.38
CCDC50-203ENST00000460064 K7ESM1 405 aa6.45□□□□□ -1.38
CCDC50-203ENST00000460064 SRGAP2O75044 1071 aa6.45□□□□□ -1.38
CCDC50-203ENST00000460064 GATA3P23771 443 aa6.45□□□□□ -1.38
CCDC50-203ENST00000460064 PRKAR1BP31321 381 aa6.45□□□□□ -1.38
CCDC50-203ENST00000460064 BIRC3Q13489 604 aa6.45□□□□□ -1.38
CCDC50-203ENST00000460064 EEF1AKMT2Q5JPI9 291 aaKnown RBP6.45□□□□□ -1.38
CCDC50-203ENST00000460064 FAXCQ5TGI0 409 aa6.45□□□□□ -1.38
CCDC50-203ENST00000460064 ERICH6BQ5W0A0 696 aa6.45□□□□□ -1.38
CCDC50-203ENST00000460064 ICE2Q659A1 982 aa6.45□□□□□ -1.38
CCDC50-203ENST00000460064 RGS7BPQ6MZT1 257 aaPredicted RBP6.45□□□□□ -1.38
CCDC50-203ENST00000460064 LDHAL6AQ6ZMR3 332 aa6.45□□□□□ -1.38
CCDC50-203ENST00000460064 KRT73Q86Y46 540 aa6.45□□□□□ -1.38
CCDC50-203ENST00000460064 C1orf210Q8IVY1 113 aa6.45□□□□□ -1.38
CCDC50-203ENST00000460064 CCDC28AQ8IWP9 274 aa6.45□□□□□ -1.38
CCDC50-203ENST00000460064 SLC15A3Q8IY34 581 aa6.45□□□□□ -1.38
CCDC50-203ENST00000460064 COLGALT2Q8IYK4 626 aa6.45□□□□□ -1.38
CCDC50-203ENST00000460064 CPEB3Q8NE35 698 aaKnown RBP6.45□□□□□ -1.38
CCDC50-203ENST00000460064 DNAJB14Q8TBM8 379 aa6.45□□□□□ -1.38
CCDC50-203ENST00000460064 ZNF384Q8TF68 577 aa6.45□□□□□ -1.38
CCDC50-203ENST00000460064 C20orf173Q96LM9 149 aa6.45□□□□□ -1.38
CCDC50-203ENST00000460064 KLC2Q9H0B6 622 aa6.45□□□□□ -1.38
CCDC50-203ENST00000460064 GBA2Q9HCG7 927 aaPredicted RBP6.45□□□□□ -1.38
CCDC50-203ENST00000460064 ZBTB26Q9HCK0 441 aa6.45□□□□□ -1.38
CCDC50-203ENST00000460064 MUSKO15146 869 aa6.44□□□□□ -1.38
CCDC50-203ENST00000460064 PLSCR1O15162 318 aa6.44□□□□□ -1.38
CCDC50-203ENST00000460064 EGR1P18146 543 aa6.44□□□□□ -1.38
CCDC50-203ENST00000460064 SERPINF1P36955 418 aa6.44□□□□□ -1.38
CCDC50-203ENST00000460064 TMTC4Q5T4D3 741 aa6.44□□□□□ -1.38
CCDC50-203ENST00000460064 VPS53Q5VIR6 699 aa6.44□□□□□ -1.38
CCDC50-203ENST00000460064 MANEALQ5VSG8 457 aa6.44□□□□□ -1.38
CCDC50-203ENST00000460064 ARL6IP4Q66PJ3 421 aaKnown RBP6.44□□□□□ -1.38
CCDC50-203ENST00000460064 SP5Q6BEB4 398 aaPredicted RBP6.44□□□□□ -1.38
CCDC50-203ENST00000460064 MZT2AQ6P582 158 aa6.44□□□□□ -1.38
CCDC50-203ENST00000460064 PALM2Q8IXS6 379 aa6.44□□□□□ -1.38
CCDC50-203ENST00000460064 CACNA2D3Q8IZS8 1091 aa6.44□□□□□ -1.38
CCDC50-203ENST00000460064 FAM71BQ8TC56 605 aa6.44□□□□□ -1.38
CCDC50-203ENST00000460064 STYXQ8WUJ0 223 aa6.44□□□□□ -1.38
CCDC50-203ENST00000460064 EXTL1Q92935 676 aa6.44□□□□□ -1.38
CCDC50-203ENST00000460064 TBC1D20Q96BZ9 403 aa6.44□□□□□ -1.38
CCDC50-203ENST00000460064 C8orf49Q96NF6 230 aa6.44□□□□□ -1.38
CCDC50-203ENST00000460064 OSBPL9Q96SU4 736 aa6.44□□□□□ -1.38
CCDC50-203ENST00000460064 PRPF18Q99633 342 aaKnown RBP6.44□□□□□ -1.38
CCDC50-203ENST00000460064 SORBS1Q9BX66 1292 aaKnown RBP6.44□□□□□ -1.38
CCDC50-203ENST00000460064 TRIM5Q9C035 493 aa6.44□□□□□ -1.38
CCDC50-203ENST00000460064 AMBRA1Q9C0C7 1298 aa6.44□□□□□ -1.38
CCDC50-203ENST00000460064 TMEM74BQ9NUR3 256 aa6.44□□□□□ -1.38
CCDC50-203ENST00000460064 INTS13Q9NVM9 706 aa6.44□□□□□ -1.38
CCDC50-203ENST00000460064 PARPBPQ9NWS1 579 aa6.44□□□□□ -1.38
CCDC50-203ENST00000460064 TMOD4Q9NZQ9 345 aa6.44□□□□□ -1.38
CCDC50-203ENST00000460064 GRHPRQ9UBQ7 328 aa6.44□□□□□ -1.38
CCDC50-203ENST00000460064 SERTAD3Q9UJW9 196 aa6.44□□□□□ -1.38
CCDC50-203ENST00000460064 DGKBQ9Y6T7 804 aa6.44□□□□□ -1.38
CCDC50-203ENST00000460064 TRGV11A0A075B6L2 103 aa6.43□□□□□ -1.38
CCDC50-203ENST00000460064 TRIM38O00635 465 aa6.43□□□□□ -1.38
CCDC50-203ENST00000460064 CDKL5O76039 1030 aa6.43□□□□□ -1.38
CCDC50-203ENST00000460064 TNFRSF6BO95407 300 aa6.43□□□□□ -1.38
CCDC50-203ENST00000460064 FGAP02671 866 aa6.43□□□□□ -1.38
CCDC50-203ENST00000460064 PECAM1P16284 738 aaPredicted RBP6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms