RNA–Protein interactions for RNA: ENST00000458022.6

SHF-202, Transcript of Src homology 2 domain containing F, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHF, Length 1,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-202ENST00000458022 CCDC83Q8IWF9 413 aa17.5■□□□□ 0.39
SHF-202ENST00000458022 TMEFF1Q8IYR6 380 aa17.5■□□□□ 0.39
SHF-202ENST00000458022 ARL14EPQ8N8R7 260 aaPredicted RBP17.5■□□□□ 0.39
SHF-202ENST00000458022 WHAMMQ8TF30 809 aa17.5■□□□□ 0.39
SHF-202ENST00000458022 RLN3Q8WXF3 142 aa17.5■□□□□ 0.39
SHF-202ENST00000458022 PLIN2Q99541 437 aa17.5■□□□□ 0.39
SHF-202ENST00000458022 PKMYT1Q99640 499 aa17.5■□□□□ 0.39
SHF-202ENST00000458022 ACBD6Q9BR61 282 aa17.5■□□□□ 0.39
SHF-202ENST00000458022 PILRBQ9UKJ0 227 aa17.5■□□□□ 0.39
SHF-202ENST00000458022 DMXL2Q8TDJ6 3036 aa17.5■□□□□ 0.39
SHF-202ENST00000458022 C2orf78A6NCI8 922 aa17.49■□□□□ 0.39
SHF-202ENST00000458022 MAP3K13O43283 966 aa17.49■□□□□ 0.39
SHF-202ENST00000458022 HMGN5P82970 282 aaKnown RBP17.49■□□□□ 0.39
SHF-202ENST00000458022 KCNB1Q14721 858 aa17.49■□□□□ 0.39
SHF-202ENST00000458022 HSF5Q4G112 596 aaPredicted RBP17.49■□□□□ 0.39
SHF-202ENST00000458022 INTS6LQ5JSJ4 861 aaKnown RBP17.49■□□□□ 0.39
SHF-202ENST00000458022 LYSMD4Q5XG99 296 aa17.49■□□□□ 0.39
SHF-202ENST00000458022 TTC30AQ86WT1 665 aa17.49■□□□□ 0.39
SHF-202ENST00000458022 PDCL2Q8N4E4 241 aa17.49■□□□□ 0.39
SHF-202ENST00000458022 MYCT1Q8N699 235 aa17.49■□□□□ 0.39
SHF-202ENST00000458022 FSIP1Q8NA03 581 aa17.49■□□□□ 0.39
SHF-202ENST00000458022 LRRC15Q8TF66 581 aa17.49■□□□□ 0.39
SHF-202ENST00000458022 ZNF560Q96MR9 790 aa17.49■□□□□ 0.39
SHF-202ENST00000458022 PARVGQ9HBI0 331 aa17.49■□□□□ 0.39
SHF-202ENST00000458022 MBD1Q9UIS9 605 aaPredicted RBP17.49■□□□□ 0.39
SHF-202ENST00000458022 STYXL1Q9Y6J8 313 aa17.49■□□□□ 0.39
SHF-202ENST00000458022 DSPP15924 2871 aaKnown RBP17.49■□□□□ 0.39
SHF-202ENST00000458022 ANKRD63C9JTQ0 380 aa17.48■□□□□ 0.39
SHF-202ENST00000458022 TRAK2O60296 914 aa17.48■□□□□ 0.39
SHF-202ENST00000458022 HDCP19113 662 aa17.48■□□□□ 0.39
SHF-202ENST00000458022 ABCD1P33897 745 aa17.48■□□□□ 0.39
SHF-202ENST00000458022 RDXP35241 583 aaKnown RBP17.48■□□□□ 0.39
SHF-202ENST00000458022 PNPLA4P41247 253 aa17.48■□□□□ 0.39
SHF-202ENST00000458022 ATP2C1P98194 919 aaPredicted RBP17.48■□□□□ 0.39
SHF-202ENST00000458022 GTF2BQ00403 316 aa17.48■□□□□ 0.39
SHF-202ENST00000458022 BYSLQ13895 437 aaKnown RBP17.48■□□□□ 0.39
SHF-202ENST00000458022 MAP7D1Q3KQU3 841 aa17.48■□□□□ 0.39
SHF-202ENST00000458022 CFAP221Q4G0U5 840 aa17.48■□□□□ 0.39
SHF-202ENST00000458022 ADALQ6DHV7 355 aa17.48■□□□□ 0.39
SHF-202ENST00000458022 NT5DC4Q86YG4 428 aa17.48■□□□□ 0.39
SHF-202ENST00000458022 HDDC3Q8N4P3 179 aa17.48■□□□□ 0.39
SHF-202ENST00000458022 ALLCQ8N6M5 410 aa17.48■□□□□ 0.39
SHF-202ENST00000458022 FRMD1Q8N878 549 aa17.48■□□□□ 0.39
SHF-202ENST00000458022 KIAA1958Q8N8K9 716 aa17.48■□□□□ 0.39
SHF-202ENST00000458022 IL17RCQ8NAC3 791 aa17.48■□□□□ 0.39
SHF-202ENST00000458022 TXNDC5Q8NBS9 432 aaKnown RBP17.48■□□□□ 0.39
SHF-202ENST00000458022 CDK5RAP3Q96JB5 506 aa17.48■□□□□ 0.39
SHF-202ENST00000458022 FIZ1Q96SL8 496 aa17.48■□□□□ 0.39
SHF-202ENST00000458022 POLMQ9NP87 494 aaPredicted RBP17.48■□□□□ 0.39
SHF-202ENST00000458022 DDX43Q9NXZ2 648 aaKnown RBP17.48■□□□□ 0.39
SHF-202ENST00000458022 L1RE1Q9UN81 338 aa17.48■□□□□ 0.39
SHF-202ENST00000458022 LIMCH1Q9UPQ0 1083 aa17.48■□□□□ 0.39
SHF-202ENST00000458022 GPSM3Q9Y4H4 160 aa17.48■□□□□ 0.39
SHF-202ENST00000458022 KIAA1549LQ6ZVL6 1849 aa17.48■□□□□ 0.39
SHF-202ENST00000458022 NUP205Q92621 2012 aa17.48■□□□□ 0.39
SHF-202ENST00000458022 ASCC3Q8N3C0 2202 aaKnown RBP17.47■□□□□ 0.39
SHF-202ENST00000458022 SGK1O00141 431 aa17.47■□□□□ 0.39
SHF-202ENST00000458022 FAM13AO94988 1023 aa17.47■□□□□ 0.39
SHF-202ENST00000458022 CYP17A1P05093 508 aa17.47■□□□□ 0.39
SHF-202ENST00000458022 PFKLP17858 780 aa17.47■□□□□ 0.39
SHF-202ENST00000458022 PDE6CP51160 858 aa17.47■□□□□ 0.39
SHF-202ENST00000458022 FAM193AP78312 1265 aa17.47■□□□□ 0.39
SHF-202ENST00000458022 ZXDBP98169 803 aa17.47■□□□□ 0.39
SHF-202ENST00000458022 ZNF423Q2M1K9 1284 aa17.47■□□□□ 0.39
SHF-202ENST00000458022 SLFN12LQ6IEE8 588 aa17.47■□□□□ 0.39
SHF-202ENST00000458022 CRELD2Q6UXH1 353 aaPredicted RBP17.47■□□□□ 0.39
SHF-202ENST00000458022 RAB44Q7Z6P3 723 aaPredicted RBP17.47■□□□□ 0.39
SHF-202ENST00000458022 GPBP1Q86WP2 473 aa17.47■□□□□ 0.39
SHF-202ENST00000458022 TMEM86AQ8N2M4 240 aa17.47■□□□□ 0.39
SHF-202ENST00000458022 CHCHD4Q8N4Q1 142 aa17.47■□□□□ 0.39
SHF-202ENST00000458022 FAM184AQ8NB25 1140 aa17.47■□□□□ 0.39
SHF-202ENST00000458022 CEP76Q8TAP6 659 aa17.47■□□□□ 0.39
SHF-202ENST00000458022 FUBP3Q96I24 572 aaKnown RBP eCLIP17.47■□□□□ 0.39
SHF-202ENST00000458022 GTF3C4Q9UKN8 822 aa17.47■□□□□ 0.39
SHF-202ENST00000458022 AGO2Q9UKV8 859 aaKnown RBP17.47■□□□□ 0.39
SHF-202ENST00000458022 CIZ1Q9ULV3 898 aaPredicted RBP17.47■□□□□ 0.39
SHF-202ENST00000458022 SLC6A14Q9UN76 642 aa17.47■□□□□ 0.39
SHF-202ENST00000458022 CACNA1EQ15878 2313 aa17.47■□□□□ 0.39
SHF-202ENST00000458022 ATXN2Q99700 1313 aaKnown RBP17.47■□□□□ 0.39
SHF-202ENST00000458022 MYMKA6NI61 221 aa17.46■□□□□ 0.39
SHF-202ENST00000458022 TISP43B9A030 160 aa17.46■□□□□ 0.39
SHF-202ENST00000458022 KLF8O95600 359 aaPredicted RBP17.46■□□□□ 0.39
SHF-202ENST00000458022 CFIP05156 583 aa17.46■□□□□ 0.39
SHF-202ENST00000458022 ITPKAP23677 461 aa17.46■□□□□ 0.39
SHF-202ENST00000458022 ACAT1P24752 427 aaKnown RBP17.46■□□□□ 0.39
SHF-202ENST00000458022 EIF2DP41214 584 aaKnown RBP17.46■□□□□ 0.39
SHF-202ENST00000458022 KIR2DL1P43626 348 aaPredicted RBP17.46■□□□□ 0.39
SHF-202ENST00000458022 ATXN3P54252 364 aaPredicted RBP17.46■□□□□ 0.39
SHF-202ENST00000458022 MYL7Q01449 175 aa17.46■□□□□ 0.39
SHF-202ENST00000458022 HNRNPDQ14103 355 aaKnown RBP17.46■□□□□ 0.39
SHF-202ENST00000458022 DUOXA1Q1HG43 343 aa17.46■□□□□ 0.39
SHF-202ENST00000458022 SOWAHCQ53LP3 525 aaPredicted RBP17.46■□□□□ 0.39
SHF-202ENST00000458022 EOGTQ5NDL2 527 aa17.46■□□□□ 0.39
SHF-202ENST00000458022 SPATA2LQ8IUW3 424 aaPredicted RBP17.46■□□□□ 0.39
SHF-202ENST00000458022 SFTPA1Q8IWL2 248 aa17.46■□□□□ 0.39
SHF-202ENST00000458022 ADGRG2Q8IZP9 1017 aa17.46■□□□□ 0.39
SHF-202ENST00000458022 SPATA18Q8TC71 538 aa17.46■□□□□ 0.39
SHF-202ENST00000458022 PNKPQ96T60 521 aa17.46■□□□□ 0.39
SHF-202ENST00000458022 CAPN10Q9HC96 672 aa17.46■□□□□ 0.39
SHF-202ENST00000458022 BCCIPQ9P287 314 aaKnown RBP eCLIP17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms