RNA–Protein interactions for RNA: ENST00000456847.7

CPSF6-203, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 5 BASIC

Gene CPSF6, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-203ENST00000456847 STIM1Q13586 685 aa17.29■□□□□ 0.36
CPSF6-203ENST00000456847 ZNF852Q6ZMS4 543 aa17.29■□□□□ 0.36
CPSF6-203ENST00000456847 TMEM150AQ86TG1 271 aa17.29■□□□□ 0.36
CPSF6-203ENST00000456847 CMTM8Q8IZV2 173 aa17.29■□□□□ 0.36
CPSF6-203ENST00000456847 CCDC150Q8NCX0 1101 aa17.29■□□□□ 0.36
CPSF6-203ENST00000456847 EEF2KMTQ96G04 330 aa17.29■□□□□ 0.36
CPSF6-203ENST00000456847 MED10Q9BTT4 135 aa17.29■□□□□ 0.36
CPSF6-203ENST00000456847 DDX23Q9BUQ8 820 aaKnown RBP17.29■□□□□ 0.36
CPSF6-203ENST00000456847 SLC46A2Q9BY10 475 aa17.29■□□□□ 0.36
CPSF6-203ENST00000456847 ELOVL4Q9GZR5 314 aa17.29■□□□□ 0.36
CPSF6-203ENST00000456847 LTB4R2Q9NPC1 389 aa17.29■□□□□ 0.36
CPSF6-203ENST00000456847 OBP2AQ9NY56 170 aa17.29■□□□□ 0.36
CPSF6-203ENST00000456847 MRPS17Q9Y2R5 130 aaKnown RBP17.29■□□□□ 0.36
CPSF6-203ENST00000456847 CHADO15335 359 aa17.28■□□□□ 0.36
CPSF6-203ENST00000456847 GADD45BO75293 160 aaPredicted RBP17.28■□□□□ 0.36
CPSF6-203ENST00000456847 LRRN2O75325 713 aa17.28■□□□□ 0.36
CPSF6-203ENST00000456847 TXNDC8Q6A555 127 aa17.28■□□□□ 0.36
CPSF6-203ENST00000456847 SPOPLQ6IQ16 392 aa17.28■□□□□ 0.36
CPSF6-203ENST00000456847 BPIFB1Q8TDL5 484 aa17.28■□□□□ 0.36
CPSF6-203ENST00000456847 TNIP3Q96KP6 325 aa17.28■□□□□ 0.36
CPSF6-203ENST00000456847 SDCBP2Q9H190 292 aa17.28■□□□□ 0.36
CPSF6-203ENST00000456847 PIAS3Q9Y6X2 628 aa17.28■□□□□ 0.36
CPSF6-203ENST00000456847 ANAPC1Q9H1A4 1944 aa17.28■□□□□ 0.36
CPSF6-203ENST00000456847 MYH10P35580 1976 aa17.28■□□□□ 0.36
CPSF6-203ENST00000456847 FAM170BA6NMN3 283 aa17.27■□□□□ 0.36
CPSF6-203ENST00000456847 ASS1P00966 412 aaKnown RBP17.27■□□□□ 0.36
CPSF6-203ENST00000456847 WEE1P30291 646 aa17.27■□□□□ 0.36
CPSF6-203ENST00000456847 ANP32AP39687 249 aaKnown RBP17.27■□□□□ 0.36
CPSF6-203ENST00000456847 ENPEPQ07075 957 aa17.27■□□□□ 0.36
CPSF6-203ENST00000456847 PPP3CAQ08209 521 aa17.27■□□□□ 0.36
CPSF6-203ENST00000456847 ANGPT1Q15389 498 aa17.27■□□□□ 0.36
CPSF6-203ENST00000456847 ARHGAP29Q52LW3 1261 aa17.27■□□□□ 0.36
CPSF6-203ENST00000456847 COBLL1Q53SF7 1204 aa17.27■□□□□ 0.36
CPSF6-203ENST00000456847 ISM2Q6H9L7 571 aa17.27■□□□□ 0.36
CPSF6-203ENST00000456847 ALYREFQ86V81 257 aaKnown RBP17.27■□□□□ 0.36
CPSF6-203ENST00000456847 CELF5Q8N6W0 485 aaKnown RBP17.27■□□□□ 0.36
CPSF6-203ENST00000456847 SPATA17Q96L03 361 aa17.27■□□□□ 0.36
CPSF6-203ENST00000456847 MYRFLQ96LU7 910 aa17.27■□□□□ 0.36
CPSF6-203ENST00000456847 BCO2Q9BYV7 579 aa17.27■□□□□ 0.36
CPSF6-203ENST00000456847 ZNF518BQ9C0D4 1074 aa17.27■□□□□ 0.36
CPSF6-203ENST00000456847 TRPV5Q9NQA5 729 aa17.27■□□□□ 0.36
CPSF6-203ENST00000456847 CHMP5Q9NZZ3 219 aa17.27■□□□□ 0.36
CPSF6-203ENST00000456847 NDRG2Q9UN36 371 aaKnown RBP17.27■□□□□ 0.36
CPSF6-203ENST00000456847 KIF26AQ9ULI4 1882 aaPredicted RBP17.27■□□□□ 0.36
CPSF6-203ENST00000456847 F8VP50 259 aa17.27■□□□□ 0.35
CPSF6-203ENST00000456847 CLDN5O00501 218 aa17.27■□□□□ 0.35
CPSF6-203ENST00000456847 MAN2B1O00754 1011 aa17.27■□□□□ 0.35
CPSF6-203ENST00000456847 TADA3O75528 432 aa17.27■□□□□ 0.35
CPSF6-203ENST00000456847 TRIM21P19474 475 aaKnown RBP17.27■□□□□ 0.35
CPSF6-203ENST00000456847 TARSP26639 723 aaKnown RBP17.27■□□□□ 0.35
CPSF6-203ENST00000456847 KPNA1P52294 538 aaPredicted RBP17.27■□□□□ 0.35
CPSF6-203ENST00000456847 NOP14P78316 857 aaKnown RBP17.27■□□□□ 0.35
CPSF6-203ENST00000456847 FCHO2Q0JRZ9 810 aa17.27■□□□□ 0.35
CPSF6-203ENST00000456847 TCERG1LQ5VWI1 586 aa17.27■□□□□ 0.35
CPSF6-203ENST00000456847 DENND5BQ6ZUT9 1274 aa17.27■□□□□ 0.35
CPSF6-203ENST00000456847 SPATA20Q8TB22 786 aa17.27■□□□□ 0.35
CPSF6-203ENST00000456847 ZFYVE19Q96K21 471 aa17.27■□□□□ 0.35
CPSF6-203ENST00000456847 PHOX2BQ99453 314 aa17.27■□□□□ 0.35
CPSF6-203ENST00000456847 B3GNT5Q9BYG0 378 aa17.27■□□□□ 0.35
CPSF6-203ENST00000456847 TMEM8AQ9HCN3 771 aa17.27■□□□□ 0.35
CPSF6-203ENST00000456847 THG1LQ9NWX6 298 aaKnown RBP17.27■□□□□ 0.35
CPSF6-203ENST00000456847 EHD2Q9NZN4 543 aa17.27■□□□□ 0.35
CPSF6-203ENST00000456847 MAN1B1Q9UKM7 699 aa17.27■□□□□ 0.35
CPSF6-203ENST00000456847 HELZP42694 1942 aaKnown RBP17.27■□□□□ 0.35
CPSF6-203ENST00000456847 PATJQ8NI35 1801 aa17.26■□□□□ 0.35
CPSF6-203ENST00000456847 PSMA7O14818 248 aa17.26■□□□□ 0.35
CPSF6-203ENST00000456847 NCAM2O15394 837 aa17.26■□□□□ 0.35
CPSF6-203ENST00000456847 STX10O60499 249 aa17.26■□□□□ 0.35
CPSF6-203ENST00000456847 IFRD2Q12894 506 aaPredicted RBP17.26■□□□□ 0.35
CPSF6-203ENST00000456847 DCAF17Q5H9S7 520 aaPredicted RBP17.26■□□□□ 0.35
CPSF6-203ENST00000456847 ACOT1Q86TX2 421 aa17.26■□□□□ 0.35
CPSF6-203ENST00000456847 MON1AQ86VX9 555 aa17.26■□□□□ 0.35
CPSF6-203ENST00000456847 TTC16Q8NEE8 873 aa17.26■□□□□ 0.35
CPSF6-203ENST00000456847 TAS1R2Q8TE23 839 aa17.26■□□□□ 0.35
CPSF6-203ENST00000456847 CEP295NLQ96MC4 621 aa17.26■□□□□ 0.35
CPSF6-203ENST00000456847 NELL2Q99435 816 aa17.26■□□□□ 0.35
CPSF6-203ENST00000456847 OSBPL6Q9BZF3 934 aa17.26■□□□□ 0.35
CPSF6-203ENST00000456847 KIF9Q9HAQ2 790 aa17.26■□□□□ 0.35
CPSF6-203ENST00000456847 MTF2Q9Y483 593 aaPredicted RBP17.26■□□□□ 0.35
CPSF6-203ENST00000456847 TRAV19A0A0A6YYK7 116 aa17.25■□□□□ 0.35
CPSF6-203ENST00000456847 TRIM49BA6NDI0 452 aa17.25■□□□□ 0.35
CPSF6-203ENST00000456847 CKMP06732 381 aa17.25■□□□□ 0.35
CPSF6-203ENST00000456847 ASPAP45381 313 aa17.25■□□□□ 0.35
CPSF6-203ENST00000456847 MRE11P49959 708 aa17.25■□□□□ 0.35
CPSF6-203ENST00000456847 MXI1P50539 228 aa17.25■□□□□ 0.35
CPSF6-203ENST00000456847 NDST1P52848 882 aa17.25■□□□□ 0.35
CPSF6-203ENST00000456847 PLCB2Q00722 1185 aa17.25■□□□□ 0.35
CPSF6-203ENST00000456847 ORC1Q13415 861 aa17.25■□□□□ 0.35
CPSF6-203ENST00000456847 KRT39Q6A163 491 aa17.25■□□□□ 0.35
CPSF6-203ENST00000456847 ANKRD40Q6AI12 368 aa17.25■□□□□ 0.35
CPSF6-203ENST00000456847 FAM35AQ86V20 835 aa17.25■□□□□ 0.35
CPSF6-203ENST00000456847 ELOA2Q8IYF1 753 aaPredicted RBP17.25■□□□□ 0.35
CPSF6-203ENST00000456847 ADSSL1Q8N142 457 aa17.25■□□□□ 0.35
CPSF6-203ENST00000456847 TTC8Q8TAM2 541 aa17.25■□□□□ 0.35
CPSF6-203ENST00000456847 FAM3CQ92520 227 aa17.25■□□□□ 0.35
CPSF6-203ENST00000456847 C8orf48Q96LL4 319 aa17.25■□□□□ 0.35
CPSF6-203ENST00000456847 TDP1Q9NUW8 608 aa17.25■□□□□ 0.35
CPSF6-203ENST00000456847 DLGAP2Q9P1A6 1054 aa17.25■□□□□ 0.35
CPSF6-203ENST00000456847 SOBPA7XYQ1 873 aa17.25■□□□□ 0.35
CPSF6-203ENST00000456847 SLC16A3O15427 465 aaKnown RBP17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms