RNA–Protein interactions for RNA: ENST00000456369.5

CHEK2-221, Transcript of checkpoint kinase 2, human

TSL 3

Gene CHEK2, Length 588 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHEK2-221	ENST00000456369	FAM171B	Q6P995	826 aa		10.62	□□□□□ -0.71
CHEK2-221	ENST00000456369	IRF2BP1	Q8IU81	584 aa		10.62	□□□□□ -0.71
CHEK2-221	ENST00000456369	TRIM59	Q8IWR1	403 aa		10.62	□□□□□ -0.71
CHEK2-221	ENST00000456369	C2orf15	Q8WU43	125 aa	Known RBP	10.62	□□□□□ -0.71
CHEK2-221	ENST00000456369	SEMA4D	Q92854	862 aa		10.62	□□□□□ -0.71
CHEK2-221	ENST00000456369	MMS19	Q96T76	1030 aa		10.62	□□□□□ -0.71
CHEK2-221	ENST00000456369	PI4K2A	Q9BTU6	479 aa		10.62	□□□□□ -0.71
CHEK2-221	ENST00000456369	NAA15	Q9BXJ9	866 aa	Known RBP	10.62	□□□□□ -0.71
CHEK2-221	ENST00000456369	SDCBP2	Q9H190	292 aa		10.62	□□□□□ -0.71
CHEK2-221	ENST00000456369	KDM4C	Q9H3R0	1056 aa		10.62	□□□□□ -0.71
CHEK2-221	ENST00000456369	SMYD3	Q9H7B4	428 aa		10.62	□□□□□ -0.71
CHEK2-221	ENST00000456369	APOBEC3G	Q9HC16	384 aa	Known RBP	10.62	□□□□□ -0.71
CHEK2-221	ENST00000456369	METTL14	Q9HCE5	456 aa	Known RBP	10.62	□□□□□ -0.71
CHEK2-221	ENST00000456369	CEP72	Q9P209	647 aa		10.62	□□□□□ -0.71
CHEK2-221	ENST00000456369	DNMT3B	Q9UBC3	853 aa	Known RBP	10.62	□□□□□ -0.71
CHEK2-221	ENST00000456369	NXF1	Q9UBU9	619 aa	Known RBP	10.62	□□□□□ -0.71
CHEK2-221	ENST00000456369	POLI	Q9UNA4	740 aa		10.62	□□□□□ -0.71
CHEK2-221	ENST00000456369	UST	Q9Y2C2	406 aa		10.62	□□□□□ -0.71
CHEK2-221	ENST00000456369	SLC27A5	Q9Y2P5	690 aa		10.62	□□□□□ -0.71
CHEK2-221	ENST00000456369	COQ4	Q9Y3A0	265 aa		10.62	□□□□□ -0.71
CHEK2-221	ENST00000456369	YIPF1	Q9Y548	306 aa		10.62	□□□□□ -0.71
CHEK2-221	ENST00000456369	CUL9	Q8IWT3	2517 aa		10.62	□□□□□ -0.71
CHEK2-221	ENST00000456369	CLUH	O75153	1309 aa		10.61	□□□□□ -0.71
CHEK2-221	ENST00000456369	TSC2	P49815	1807 aa		10.61	□□□□□ -0.71
CHEK2-221	ENST00000456369	MYBPHL	A2RUH7	354 aa		10.61	□□□□□ -0.71
CHEK2-221	ENST00000456369	LGALS16	A8MUM7	142 aa		10.61	□□□□□ -0.71
CHEK2-221	ENST00000456369	KIF2A	O00139	706 aa	Predicted RBP	10.61	□□□□□ -0.71
CHEK2-221	ENST00000456369	PMM2	O15305	246 aa		10.61	□□□□□ -0.71
CHEK2-221	ENST00000456369	CCL16	O15467	120 aa		10.61	□□□□□ -0.71
CHEK2-221	ENST00000456369	ARHGAP6	O43182	974 aa		10.61	□□□□□ -0.71
CHEK2-221	ENST00000456369	STX10	O60499	249 aa		10.61	□□□□□ -0.71
CHEK2-221	ENST00000456369	ATP2C2	O75185	946 aa		10.61	□□□□□ -0.71
CHEK2-221	ENST00000456369	XYLB	O75191	536 aa		10.61	□□□□□ -0.71
CHEK2-221	ENST00000456369	GNA14	O95837	355 aa		10.61	□□□□□ -0.71
CHEK2-221	ENST00000456369	PCSK1	P29120	753 aa		10.61	□□□□□ -0.71
CHEK2-221	ENST00000456369	ELF1	P32519	619 aa		10.61	□□□□□ -0.71
CHEK2-221	ENST00000456369	PIK3CA	P42336	1068 aa		10.61	□□□□□ -0.71
CHEK2-221	ENST00000456369	MXI1	P50539	228 aa		10.61	□□□□□ -0.71
CHEK2-221	ENST00000456369	CDH8	P55286	799 aa		10.61	□□□□□ -0.71
CHEK2-221	ENST00000456369	USP46	P62068	366 aa		10.61	□□□□□ -0.71
CHEK2-221	ENST00000456369	NTHL1	P78549	312 aa		10.61	□□□□□ -0.71
CHEK2-221	ENST00000456369	MYL7	Q01449	175 aa		10.61	□□□□□ -0.71
CHEK2-221	ENST00000456369	TWF1	Q12792	350 aa		10.61	□□□□□ -0.71
CHEK2-221	ENST00000456369	DCAF17	Q5H9S7	520 aa	Predicted RBP	10.61	□□□□□ -0.71
CHEK2-221	ENST00000456369	SPOPL	Q6IQ16	392 aa		10.61	□□□□□ -0.71
CHEK2-221	ENST00000456369	GRASP	Q7Z6J2	395 aa	Predicted RBP	10.61	□□□□□ -0.71
CHEK2-221	ENST00000456369	CNGA4	Q8IV77	575 aa		10.61	□□□□□ -0.71
CHEK2-221	ENST00000456369	DCP1B	Q8IZD4	617 aa	Known RBP	10.61	□□□□□ -0.71
CHEK2-221	ENST00000456369	RPGRIP1	Q96KN7	1286 aa		10.61	□□□□□ -0.71
CHEK2-221	ENST00000456369	PANX2	Q96RD6	677 aa		10.61	□□□□□ -0.71
CHEK2-221	ENST00000456369	SRRT	Q9BXP5	876 aa	Known RBP	10.61	□□□□□ -0.71
CHEK2-221	ENST00000456369	BCO2	Q9BYV7	579 aa		10.61	□□□□□ -0.71
CHEK2-221	ENST00000456369	CRTAC1	Q9NQ79	661 aa		10.61	□□□□□ -0.71
CHEK2-221	ENST00000456369	AVEN	Q9NQS1	362 aa	Predicted RBP	10.61	□□□□□ -0.71
CHEK2-221	ENST00000456369	HCFC1R1	Q9NWW0	138 aa		10.61	□□□□□ -0.71
CHEK2-221	ENST00000456369	RAB20	Q9NX57	234 aa		10.61	□□□□□ -0.71
CHEK2-221	ENST00000456369	GTF3C4	Q9UKN8	822 aa		10.61	□□□□□ -0.71
CHEK2-221	ENST00000456369	CDH9	Q9ULB4	789 aa		10.61	□□□□□ -0.71
CHEK2-221	ENST00000456369	C2CD4D	B7Z1M9	353 aa		10.6	□□□□□ -0.71
CHEK2-221	ENST00000456369	AKR1B15	C9JRZ8	316 aa	Predicted RBP	10.6	□□□□□ -0.71
CHEK2-221	ENST00000456369	TNFRSF10A	O00220	468 aa		10.6	□□□□□ -0.71
CHEK2-221	ENST00000456369	DLL1	O00548	723 aa		10.6	□□□□□ -0.71
CHEK2-221	ENST00000456369	NRG2	O14511	850 aa	Predicted RBP	10.6	□□□□□ -0.71
CHEK2-221	ENST00000456369	SOAT2	O75908	522 aa		10.6	□□□□□ -0.71
CHEK2-221	ENST00000456369	PDGFRB	P09619	1106 aa		10.6	□□□□□ -0.71
CHEK2-221	ENST00000456369	HAPLN1	P10915	354 aa	Predicted RBP	10.6	□□□□□ -0.71
CHEK2-221	ENST00000456369	ATF6	P18850	670 aa		10.6	□□□□□ -0.71
CHEK2-221	ENST00000456369	GNL1	P36915	607 aa	Predicted RBP	10.6	□□□□□ -0.71
CHEK2-221	ENST00000456369	RAP1GAP	P47736	663 aa		10.6	□□□□□ -0.71
CHEK2-221	ENST00000456369	TUFM	P49411	452 aa	Known RBP	10.6	□□□□□ -0.71
CHEK2-221	ENST00000456369	CDR1	P51861	262 aa		10.6	□□□□□ -0.71
CHEK2-221	ENST00000456369	EPHA5	P54756	1037 aa		10.6	□□□□□ -0.71
CHEK2-221	ENST00000456369	NOP14	P78316	857 aa	Known RBP	10.6	□□□□□ -0.71
CHEK2-221	ENST00000456369	TSPY1	Q01534	308 aa		10.6	□□□□□ -0.71
CHEK2-221	ENST00000456369	NFE2	Q16621	373 aa	Predicted RBP	10.6	□□□□□ -0.71
CHEK2-221	ENST00000456369	SLC5A9	Q2M3M2	681 aa		10.6	□□□□□ -0.71
CHEK2-221	ENST00000456369	CFAP221	Q4G0U5	840 aa		10.6	□□□□□ -0.71
CHEK2-221	ENST00000456369	HSP90AA4P	Q58FG1	418 aa		10.6	□□□□□ -0.71
CHEK2-221	ENST00000456369	ZNF667	Q5HYK9	610 aa		10.6	□□□□□ -0.71
CHEK2-221	ENST00000456369	ZDHHC14	Q8IZN3	488 aa		10.6	□□□□□ -0.71
CHEK2-221	ENST00000456369	FBXL13	Q8NEE6	735 aa		10.6	□□□□□ -0.71
CHEK2-221	ENST00000456369	SPPL2B	Q8TCT7	592 aa		10.6	□□□□□ -0.71
CHEK2-221	ENST00000456369	FAXDC2	Q96IV6	333 aa		10.6	□□□□□ -0.71
CHEK2-221	ENST00000456369	SYT15	Q9BQS2	421 aa		10.6	□□□□□ -0.71
CHEK2-221	ENST00000456369	LRRC3	Q9BY71	257 aa		10.6	□□□□□ -0.71
CHEK2-221	ENST00000456369	DPEP3	Q9H4B8	488 aa		10.6	□□□□□ -0.71
CHEK2-221	ENST00000456369	MMRN2	Q9H8L6	949 aa		10.6	□□□□□ -0.71
CHEK2-221	ENST00000456369	PIDD1	Q9HB75	910 aa		10.6	□□□□□ -0.71
CHEK2-221	ENST00000456369	ABCB6	Q9NP58	842 aa		10.6	□□□□□ -0.71
CHEK2-221	ENST00000456369	GOLGA6L9	A6NEM1	432 aa		10.59	□□□□□ -0.71
CHEK2-221	ENST00000456369	LRG1	P02750	347 aa		10.59	□□□□□ -0.71
CHEK2-221	ENST00000456369	RHO	P08100	348 aa		10.59	□□□□□ -0.71
CHEK2-221	ENST00000456369	P4HA1	P13674	534 aa		10.59	□□□□□ -0.71
CHEK2-221	ENST00000456369	SP100	P23497	879 aa	Predicted RBP	10.59	□□□□□ -0.71
CHEK2-221	ENST00000456369	FSHR	P23945	695 aa		10.59	□□□□□ -0.71
CHEK2-221	ENST00000456369	CCR2	P41597	374 aa		10.59	□□□□□ -0.71
CHEK2-221	ENST00000456369	FMO5	P49326	533 aa		10.59	□□□□□ -0.71
CHEK2-221	ENST00000456369	PSMC1	P62191	440 aa	Known RBP	10.59	□□□□□ -0.71
CHEK2-221	ENST00000456369	INCA1	Q0VD86	236 aa		10.59	□□□□□ -0.71
CHEK2-221	ENST00000456369	ARID5B	Q14865	1188 aa		10.59	□□□□□ -0.71

Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms