RNA–Protein interactions for RNA: ENST00000455220.6

CCDC90B-202, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 1 (best) BASIC

Gene CCDC90B, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-202ENST00000455220 ZNF461Q8TAF7 563 aa17.57■□□□□ 0.4
CCDC90B-202ENST00000455220 SPPL2BQ8TCT7 592 aa17.57■□□□□ 0.4
CCDC90B-202ENST00000455220 GDPD5Q8WTR4 605 aa17.57■□□□□ 0.4
CCDC90B-202ENST00000455220 SMARCD1Q96GM5 515 aa17.57■□□□□ 0.4
CCDC90B-202ENST00000455220 ZNF830Q96NB3 372 aaPredicted RBP17.57■□□□□ 0.4
CCDC90B-202ENST00000455220 KLHL5Q96PQ7 755 aa17.57■□□□□ 0.4
CCDC90B-202ENST00000455220 MED10Q9BTT4 135 aa17.57■□□□□ 0.4
CCDC90B-202ENST00000455220 DUSP16Q9BY84 665 aa17.57■□□□□ 0.4
CCDC90B-202ENST00000455220 PDCL3Q9H2J4 239 aa17.57■□□□□ 0.4
CCDC90B-202ENST00000455220 CSNK1G1Q9HCP0 422 aa17.57■□□□□ 0.4
CCDC90B-202ENST00000455220 SEPT11Q9NVA2 429 aaKnown RBP17.57■□□□□ 0.4
CCDC90B-202ENST00000455220 AFF4Q9UHB7 1163 aaKnown RBP17.57■□□□□ 0.4
CCDC90B-202ENST00000455220 NAGPAQ9UK23 515 aa17.57■□□□□ 0.4
CCDC90B-202ENST00000455220 CEP83Q9Y592 693 aa17.57■□□□□ 0.4
CCDC90B-202ENST00000455220 EPN1Q9Y6I3 576 aaPredicted RBP17.57■□□□□ 0.4
CCDC90B-202ENST00000455220 EIF3CLB5ME19 914 aaKnown RBP17.56■□□□□ 0.4
CCDC90B-202ENST00000455220 NDUFA10O95299 355 aa17.56■□□□□ 0.4
CCDC90B-202ENST00000455220 FAM200BP0CF97 657 aa17.56■□□□□ 0.4
CCDC90B-202ENST00000455220 SETSIPP0DME0 302 aa17.56■□□□□ 0.4
CCDC90B-202ENST00000455220 NPR3P17342 541 aa17.56■□□□□ 0.4
CCDC90B-202ENST00000455220 MAGEA11P43364 429 aa17.56■□□□□ 0.4
CCDC90B-202ENST00000455220 CENPCQ03188 943 aa17.56■□□□□ 0.4
CCDC90B-202ENST00000455220 GFPT1Q06210 699 aaPredicted RBP17.56■□□□□ 0.4
CCDC90B-202ENST00000455220 BST2Q10589 180 aaKnown RBP17.56■□□□□ 0.4
CCDC90B-202ENST00000455220 CLEC20AQ6ZU45 233 aa17.56■□□□□ 0.4
CCDC90B-202ENST00000455220 TMEM35BQ8NCS4 154 aa17.56■□□□□ 0.4
CCDC90B-202ENST00000455220 SLC35F5Q8WV83 523 aa17.56■□□□□ 0.4
CCDC90B-202ENST00000455220 SECISBP2LQ93073 1101 aaKnown RBP17.56■□□□□ 0.4
CCDC90B-202ENST00000455220 EIF3CQ99613 913 aaKnown RBP17.56■□□□□ 0.4
CCDC90B-202ENST00000455220 EMILIN2Q9BXX0 1053 aa17.56■□□□□ 0.4
CCDC90B-202ENST00000455220 ZNF576Q9H609 170 aa17.56■□□□□ 0.4
CCDC90B-202ENST00000455220 KRT82Q9NSB4 513 aa17.56■□□□□ 0.4
CCDC90B-202ENST00000455220 SPTLC3Q9NUV7 552 aa17.56■□□□□ 0.4
CCDC90B-202ENST00000455220 TMEM30AQ9NV96 361 aa17.56■□□□□ 0.4
CCDC90B-202ENST00000455220 HSFX1Q9UBD0 423 aa17.56■□□□□ 0.4
CCDC90B-202ENST00000455220 PCDHGC5Q9Y5F6 944 aa17.56■□□□□ 0.4
CCDC90B-202ENST00000455220 MYH10P35580 1976 aa17.55■□□□□ 0.4
CCDC90B-202ENST00000455220 ZNF263O14978 683 aa17.55■□□□□ 0.4
CCDC90B-202ENST00000455220 LPXNO60711 386 aa17.55■□□□□ 0.4
CCDC90B-202ENST00000455220 AP1G2O75843 785 aa17.55■□□□□ 0.4
CCDC90B-202ENST00000455220 ADH1AP07327 375 aa17.55■□□□□ 0.4
CCDC90B-202ENST00000455220 ATF2P15336 505 aa17.55■□□□□ 0.4
CCDC90B-202ENST00000455220 BDNFP23560 247 aa17.55■□□□□ 0.4
CCDC90B-202ENST00000455220 CACNA2D1P54289 1103 aa17.55■□□□□ 0.4
CCDC90B-202ENST00000455220 PDE4CQ08493 712 aa17.55■□□□□ 0.4
CCDC90B-202ENST00000455220 HS1BP3Q53T59 392 aa17.55■□□□□ 0.4
CCDC90B-202ENST00000455220 ALKBH5Q6P6C2 394 aaKnown RBP17.55■□□□□ 0.4
CCDC90B-202ENST00000455220 VSTM1Q6UX27 236 aa17.55■□□□□ 0.4
CCDC90B-202ENST00000455220 ATAD1Q8NBU5 361 aa17.55■□□□□ 0.4
CCDC90B-202ENST00000455220 C1orf131Q8NDD1 294 aaKnown RBP17.55■□□□□ 0.4
CCDC90B-202ENST00000455220 UBA3Q8TBC4 463 aa17.55■□□□□ 0.4
CCDC90B-202ENST00000455220 STK32AQ8WU08 396 aa17.55■□□□□ 0.4
CCDC90B-202ENST00000455220 PGLYRP2Q96PD5 576 aa17.55■□□□□ 0.4
CCDC90B-202ENST00000455220 SMOQ99835 787 aa17.55■□□□□ 0.4
CCDC90B-202ENST00000455220 RHOBTB2Q9BYZ6 727 aa17.55■□□□□ 0.4
CCDC90B-202ENST00000455220 ABI2Q9NYB9 513 aaPredicted RBP17.55■□□□□ 0.4
CCDC90B-202ENST00000455220 TAS2R14Q9NYV8 317 aa17.55■□□□□ 0.4
CCDC90B-202ENST00000455220 CYTH4Q9UIA0 394 aa17.55■□□□□ 0.4
CCDC90B-202ENST00000455220 MAFFQ9ULX9 164 aa17.55■□□□□ 0.4
CCDC90B-202ENST00000455220 XPO1O14980 1071 aaKnown RBP17.54■□□□□ 0.4
CCDC90B-202ENST00000455220 BEST1O76090 585 aa17.54■□□□□ 0.4
CCDC90B-202ENST00000455220 C1RP00736 705 aa17.54■□□□□ 0.4
CCDC90B-202ENST00000455220 CYP2F1P24903 491 aa17.54■□□□□ 0.4
CCDC90B-202ENST00000455220 CA8P35219 290 aa17.54■□□□□ 0.4
CCDC90B-202ENST00000455220 PLA2G4AP47712 749 aa17.54■□□□□ 0.4
CCDC90B-202ENST00000455220 RPL34P49207 117 aaKnown RBP17.54■□□□□ 0.4
CCDC90B-202ENST00000455220 CDR1P51861 262 aa17.54■□□□□ 0.4
CCDC90B-202ENST00000455220 NAA35Q5VZE5 725 aa17.54■□□□□ 0.4
CCDC90B-202ENST00000455220 PPP1R2P3Q6NXS1 205 aa17.54■□□□□ 0.4
CCDC90B-202ENST00000455220 ZMIZ2Q8NF64 920 aa17.54■□□□□ 0.4
CCDC90B-202ENST00000455220 MICAL1Q8TDZ2 1067 aa17.54■□□□□ 0.4
CCDC90B-202ENST00000455220 UBXN6Q9BZV1 441 aa17.54■□□□□ 0.4
CCDC90B-202ENST00000455220 ISCUQ9H1K1 167 aa17.54■□□□□ 0.4
CCDC90B-202ENST00000455220 CRISPLD1Q9H336 500 aa17.54■□□□□ 0.4
CCDC90B-202ENST00000455220 DMAP1Q9NPF5 467 aaPredicted RBP17.54■□□□□ 0.4
CCDC90B-202ENST00000455220 PATJQ8NI35 1801 aa17.54■□□□□ 0.4
CCDC90B-202ENST00000455220 TULP2O00295 520 aa17.53■□□□□ 0.4
CCDC90B-202ENST00000455220 SLC8A3P57103 927 aa17.53■□□□□ 0.4
CCDC90B-202ENST00000455220 ADCY1Q08828 1119 aa17.53■□□□□ 0.4
CCDC90B-202ENST00000455220 PDCLQ13371 301 aa17.53■□□□□ 0.4
CCDC90B-202ENST00000455220 ACAD10Q6JQN1 1059 aa17.53■□□□□ 0.4
CCDC90B-202ENST00000455220 LILRA6Q6PI73 481 aa17.53■□□□□ 0.4
CCDC90B-202ENST00000455220 PHF13Q86YI8 300 aaPredicted RBP17.53■□□□□ 0.4
CCDC90B-202ENST00000455220 TTC9BQ8N6N2 239 aa17.53■□□□□ 0.4
CCDC90B-202ENST00000455220 CPA5Q8WXQ8 436 aa17.53■□□□□ 0.4
CCDC90B-202ENST00000455220 PNPLA8Q9NP80 782 aa17.53■□□□□ 0.4
CCDC90B-202ENST00000455220 PLXNA3P51805 1871 aa17.53■□□□□ 0.4
CCDC90B-202ENST00000455220 TGM5O43548 720 aa17.53■□□□□ 0.4
CCDC90B-202ENST00000455220 RTN2O75298 545 aa17.53■□□□□ 0.4
CCDC90B-202ENST00000455220 CSPG5O95196 566 aa17.53■□□□□ 0.4
CCDC90B-202ENST00000455220 HAPLN1P10915 354 aaPredicted RBP17.53■□□□□ 0.4
CCDC90B-202ENST00000455220 MMP8P22894 467 aa17.53■□□□□ 0.4
CCDC90B-202ENST00000455220 NSFP46459 744 aaKnown RBP17.53■□□□□ 0.4
CCDC90B-202ENST00000455220 MAP3K7CLP57077 242 aa17.53■□□□□ 0.4
CCDC90B-202ENST00000455220 DUSP4Q13115 394 aa17.53■□□□□ 0.4
CCDC90B-202ENST00000455220 PTPROQ16827 1216 aa17.53■□□□□ 0.4
CCDC90B-202ENST00000455220 CCDC122Q5T0U0 273 aa17.53■□□□□ 0.4
CCDC90B-202ENST00000455220 PMF1Q6P1K2 205 aa17.53■□□□□ 0.4
CCDC90B-202ENST00000455220 TOGARAM2Q6ZUX3 1019 aa17.53■□□□□ 0.4
CCDC90B-202ENST00000455220 MRPL38Q96DV4 380 aaKnown RBP17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms