RNA–Protein interactions for RNA: ENST00000454830.6

CLK3-203, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 3,787 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-203ENST00000454830 CD4P01730 458 aa14.36□□□□□ -0.11
CLK3-203ENST00000454830 SHBGP04278 402 aa14.36□□□□□ -0.11
CLK3-203ENST00000454830 ETS1P14921 441 aa14.36□□□□□ -0.11
CLK3-203ENST00000454830 ACAT1P24752 427 aaKnown RBP14.36□□□□□ -0.11
CLK3-203ENST00000454830 MIPP30301 263 aa14.36□□□□□ -0.11
CLK3-203ENST00000454830 CRYBB1P53674 252 aaPredicted RBP14.36□□□□□ -0.11
CLK3-203ENST00000454830 GUCY1A3Q02108 690 aa14.36□□□□□ -0.11
CLK3-203ENST00000454830 ZNF268Q14587 947 aaPredicted RBP14.36□□□□□ -0.11
CLK3-203ENST00000454830 TAF5Q15542 800 aa14.36□□□□□ -0.11
CLK3-203ENST00000454830 CCNG2Q16589 344 aa14.36□□□□□ -0.11
CLK3-203ENST00000454830 P3H1Q32P28 736 aa14.36□□□□□ -0.11
CLK3-203ENST00000454830 SH3PXD2AQ5TCZ1 1133 aa14.36□□□□□ -0.11
CLK3-203ENST00000454830 PIWIL1Q96J94 861 aaKnown RBP14.36□□□□□ -0.11
CLK3-203ENST00000454830 ZNF560Q96MR9 790 aa14.36□□□□□ -0.11
CLK3-203ENST00000454830 MED10Q9BTT4 135 aa14.36□□□□□ -0.11
CLK3-203ENST00000454830 B3GNT5Q9BYG0 378 aa14.36□□□□□ -0.11
CLK3-203ENST00000454830 GPATCH2LQ9NWQ4 482 aa14.36□□□□□ -0.11
CLK3-203ENST00000454830 SIP14410 1827 aa14.36□□□□□ -0.11
CLK3-203ENST00000454830 ELNP15502 786 aa14.36□□□□□ -0.11
CLK3-203ENST00000454830 CDH5P33151 784 aaPredicted RBP14.36□□□□□ -0.11
CLK3-203ENST00000454830 TAF6P49848 677 aa14.36□□□□□ -0.11
CLK3-203ENST00000454830 ARSEP51690 589 aa14.36□□□□□ -0.11
CLK3-203ENST00000454830 CDH6P55285 790 aa14.36□□□□□ -0.11
CLK3-203ENST00000454830 MAGOHP61326 146 aaKnown RBP14.36□□□□□ -0.11
CLK3-203ENST00000454830 GPS1Q13098 491 aa14.36□□□□□ -0.11
CLK3-203ENST00000454830 TTC39CQ8N584 583 aa14.36□□□□□ -0.11
CLK3-203ENST00000454830 LPPQ93052 612 aa14.36□□□□□ -0.11
CLK3-203ENST00000454830 MTG1Q9BT17 334 aaPredicted RBP14.36□□□□□ -0.11
CLK3-203ENST00000454830 TMEM121Q9BTD3 319 aa14.36□□□□□ -0.11
CLK3-203ENST00000454830 PABPC3Q9H361 631 aaKnown RBP14.36□□□□□ -0.11
CLK3-203ENST00000454830 HMGB1P1B2RPK0 211 aaPredicted RBP14.35□□□□□ -0.11
CLK3-203ENST00000454830 GPD1P21695 349 aa14.35□□□□□ -0.11
CLK3-203ENST00000454830 MTM1Q13496 603 aa14.35□□□□□ -0.11
CLK3-203ENST00000454830 SLMAPQ14BN4 828 aa14.35□□□□□ -0.11
CLK3-203ENST00000454830 PPP6R3Q5H9R7 873 aaPredicted RBP14.35□□□□□ -0.11
CLK3-203ENST00000454830 FAM182AQ5T1J6 154 aa14.35□□□□□ -0.11
CLK3-203ENST00000454830 ZNF618Q5T7W0 954 aa14.35□□□□□ -0.11
CLK3-203ENST00000454830 PMF1Q6P1K2 205 aa14.35□□□□□ -0.11
CLK3-203ENST00000454830 HOOK3Q86VS8 718 aa14.35□□□□□ -0.11
CLK3-203ENST00000454830 SEC14L1Q92503 715 aa14.35□□□□□ -0.11
CLK3-203ENST00000454830 MRRFQ96E11 262 aaKnown RBP14.35□□□□□ -0.11
CLK3-203ENST00000454830 CFAP57Q96MR6 1250 aa14.35□□□□□ -0.11
CLK3-203ENST00000454830 GOLGA8MH3BSY2 632 aa14.35□□□□□ -0.11
CLK3-203ENST00000454830 RGS16O15492 202 aaPredicted RBP14.35□□□□□ -0.11
CLK3-203ENST00000454830 CD48P09326 243 aa14.35□□□□□ -0.11
CLK3-203ENST00000454830 LMO2P25791 158 aa14.35□□□□□ -0.11
CLK3-203ENST00000454830 IL1R2P27930 398 aa14.35□□□□□ -0.11
CLK3-203ENST00000454830 THPOP40225 353 aa14.35□□□□□ -0.11
CLK3-203ENST00000454830 LRIG3Q6UXM1 1119 aa14.35□□□□□ -0.11
CLK3-203ENST00000454830 CXorf38Q8TB03 319 aa14.35□□□□□ -0.11
CLK3-203ENST00000454830 RSAD2Q8WXG1 361 aa14.35□□□□□ -0.11
CLK3-203ENST00000454830 TRIB2Q92519 343 aa14.35□□□□□ -0.11
CLK3-203ENST00000454830 TMBIM4Q9HC24 238 aa14.35□□□□□ -0.11
CLK3-203ENST00000454830 USP18Q9UMW8 372 aa14.35□□□□□ -0.11
CLK3-203ENST00000454830 INPP5FQ9Y2H2 1132 aa14.35□□□□□ -0.11
CLK3-203ENST00000454830 TIMM13Q9Y5L4 95 aaPredicted RBP14.35□□□□□ -0.11
CLK3-203ENST00000454830 SCN1AP35498 2009 aa14.35□□□□□ -0.11
CLK3-203ENST00000454830 DUSP11O75319 330 aaKnown RBP14.35□□□□□ -0.11
CLK3-203ENST00000454830 PPFIA2O75334 1257 aa14.35□□□□□ -0.11
CLK3-203ENST00000454830 MAP3K6O95382 1288 aa14.35□□□□□ -0.11
CLK3-203ENST00000454830 CYP3A5P20815 502 aa14.35□□□□□ -0.11
CLK3-203ENST00000454830 CTGFP29279 349 aa14.35□□□□□ -0.11
CLK3-203ENST00000454830 SDC4P31431 198 aa14.35□□□□□ -0.11
CLK3-203ENST00000454830 DRG2P55039 364 aaKnown RBP14.35□□□□□ -0.11
CLK3-203ENST00000454830 PRKCZQ05513 592 aa14.35□□□□□ -0.11
CLK3-203ENST00000454830 C12orf50Q8NA57 414 aaPredicted RBP14.35□□□□□ -0.11
CLK3-203ENST00000454830 GAD1Q99259 594 aa14.35□□□□□ -0.11
CLK3-203ENST00000454830 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.35□□□□□ -0.11
CLK3-203ENST00000454830 ITIH2P19823 946 aa14.34□□□□□ -0.11
CLK3-203ENST00000454830 AXLP30530 894 aa14.34□□□□□ -0.11
CLK3-203ENST00000454830 KYNUQ16719 465 aa14.34□□□□□ -0.11
CLK3-203ENST00000454830 SOWAHAQ2M3V2 549 aa14.34□□□□□ -0.11
CLK3-203ENST00000454830 PAN2Q504Q3 1202 aaKnown RBP14.34□□□□□ -0.11
CLK3-203ENST00000454830 TAF2Q6P1X5 1199 aa14.34□□□□□ -0.11
CLK3-203ENST00000454830 LCLAT1Q6UWP7 414 aa14.34□□□□□ -0.11
CLK3-203ENST00000454830 TRPV1Q8NER1 839 aa14.34□□□□□ -0.11
CLK3-203ENST00000454830 DDX23Q9BUQ8 820 aaKnown RBP14.34□□□□□ -0.11
CLK3-203ENST00000454830 DNAI2Q9GZS0 605 aa14.34□□□□□ -0.11
CLK3-203ENST00000454830 VRTNQ9H8Y1 702 aa14.34□□□□□ -0.11
CLK3-203ENST00000454830 PPANQ9NQ55 473 aaKnown RBP14.34□□□□□ -0.11
CLK3-203ENST00000454830 XPNPEP3Q9NQH7 507 aa14.34□□□□□ -0.11
CLK3-203ENST00000454830 PSD3Q9NYI0 1048 aa14.34□□□□□ -0.11
CLK3-203ENST00000454830 KIAA1257Q9ULG3 409 aa14.34□□□□□ -0.11
CLK3-203ENST00000454830 ST3GAL5Q9UNP4 418 aa14.34□□□□□ -0.11
CLK3-203ENST00000454830 MEIS3P2A8K0S8 358 aa14.34□□□□□ -0.11
CLK3-203ENST00000454830 CHKAP35790 457 aa14.34□□□□□ -0.11
CLK3-203ENST00000454830 LMNB2Q03252 620 aa14.34□□□□□ -0.11
CLK3-203ENST00000454830 ZC3H18Q86VM9 953 aaKnown RBP14.34□□□□□ -0.11
CLK3-203ENST00000454830 FAM228AQ86W67 206 aa14.34□□□□□ -0.11
CLK3-203ENST00000454830 ACTL9Q8TC94 416 aa14.34□□□□□ -0.11
CLK3-203ENST00000454830 C9orf72Q96LT7 481 aa14.34□□□□□ -0.11
CLK3-203ENST00000454830 hCG_1818297A0A087WSY0 165 aa14.34□□□□□ -0.11
CLK3-203ENST00000454830 MLH1P40692 756 aa14.34□□□□□ -0.11
CLK3-203ENST00000454830 HNRNPH2P55795 449 aaKnown RBP14.34□□□□□ -0.11
CLK3-203ENST00000454830 MRPS6P82932 125 aaKnown RBP14.34□□□□□ -0.11
CLK3-203ENST00000454830 OTUD4Q01804 1114 aaKnown RBP14.34□□□□□ -0.11
CLK3-203ENST00000454830 SOX4Q06945 474 aaPredicted RBP14.34□□□□□ -0.11
CLK3-203ENST00000454830 RAB6CQ53S08 254 aa14.34□□□□□ -0.11
CLK3-203ENST00000454830 UBAP2Q5T6F2 1119 aaKnown RBP14.34□□□□□ -0.11
CLK3-203ENST00000454830 TAX1BP1Q86VP1 789 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms