RNA–Protein interactions for RNA: ENST00000454542.5

HDAC4-205, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-205ENST00000454542 TRPV4Q9HBA0 871 aa15.07■□□□□ 0
HDAC4-205ENST00000454542 CISHQ9NSE2 258 aa15.07■□□□□ 0
HDAC4-205ENST00000454542 NCANO14594 1321 aa15.07■□□□□ 0
HDAC4-205ENST00000454542 ATP8B3O60423 1300 aa15.07■□□□□ 0
HDAC4-205ENST00000454542 MYO10Q9HD67 2058 aa15.07■□□□□ 0
HDAC4-205ENST00000454542 HELZP42694 1942 aaKnown RBP15.06■□□□□ 0
HDAC4-205ENST00000454542 GTPBP10A4D1E9 387 aaKnown RBP15.06■□□□□ 0
HDAC4-205ENST00000454542 F8VP50 259 aa15.06■□□□□ 0
HDAC4-205ENST00000454542 ECI2O75521 394 aa15.06■□□□□ 0
HDAC4-205ENST00000454542 F11P03951 625 aa15.06■□□□□ 0
HDAC4-205ENST00000454542 CCDC130P13994 396 aa15.06■□□□□ 0
HDAC4-205ENST00000454542 GJA1P17302 382 aa15.06■□□□□ 0
HDAC4-205ENST00000454542 CD58P19256 250 aa15.06■□□□□ 0
HDAC4-205ENST00000454542 TBXAS1P24557 533 aaPredicted RBP15.06■□□□□ 0
HDAC4-205ENST00000454542 GCNT1Q02742 428 aa15.06■□□□□ 0
HDAC4-205ENST00000454542 SIGLEC14Q08ET2 396 aa15.06■□□□□ 0
HDAC4-205ENST00000454542 ORC1Q13415 861 aa15.06■□□□□ 0
HDAC4-205ENST00000454542 TDGQ13569 410 aa15.06■□□□□ 0
HDAC4-205ENST00000454542 KLHL40Q2TBA0 621 aa15.06■□□□□ 0
HDAC4-205ENST00000454542 STXBP5Q5T5C0 1151 aa15.06■□□□□ 0
HDAC4-205ENST00000454542 FAM114A1Q8IWE2 563 aa15.06■□□□□ 0
HDAC4-205ENST00000454542 SCN4BQ8IWT1 228 aa15.06■□□□□ 0
HDAC4-205ENST00000454542 FAM200AQ8TCP9 573 aa15.06■□□□□ 0
HDAC4-205ENST00000454542 GPR152Q8TDT2 470 aa15.06■□□□□ 0
HDAC4-205ENST00000454542 RSAD2Q8WXG1 361 aa15.06■□□□□ 0
HDAC4-205ENST00000454542 MCRS1Q96EZ8 462 aa15.06■□□□□ 0
HDAC4-205ENST00000454542 ASIC4Q96FT7 647 aa15.06■□□□□ 0
HDAC4-205ENST00000454542 SMARCD1Q96GM5 515 aa15.06■□□□□ 0
HDAC4-205ENST00000454542 NT5C1BQ96P26 610 aa15.06■□□□□ 0
HDAC4-205ENST00000454542 GPR88Q9GZN0 384 aa15.06■□□□□ 0
HDAC4-205ENST00000454542 CSNK1G1Q9HCP0 422 aa15.06■□□□□ 0
HDAC4-205ENST00000454542 ANO10Q9NW15 660 aa15.06■□□□□ 0
HDAC4-205ENST00000454542 UXTQ9UBK9 157 aaPredicted RBP15.06■□□□□ 0
HDAC4-205ENST00000454542 ZMYM5Q9UJ78 669 aa15.06■□□□□ 0
HDAC4-205ENST00000454542 SOBPA7XYQ1 873 aa15.05■□□□□ -0
HDAC4-205ENST00000454542 GPR37L1O60883 481 aa15.05■□□□□ -0
HDAC4-205ENST00000454542 ACO1P21399 889 aaKnown RBP15.05■□□□□ -0
HDAC4-205ENST00000454542 DDX6P26196 483 aaKnown RBP eCLIP15.05■□□□□ -0
HDAC4-205ENST00000454542 RAD23BP54727 409 aa15.05■□□□□ -0
HDAC4-205ENST00000454542 CETN1Q12798 172 aa15.05■□□□□ -0
HDAC4-205ENST00000454542 MAN2A1Q16706 1144 aa15.05■□□□□ -0
HDAC4-205ENST00000454542 FAM78AQ5JUQ0 283 aa15.05■□□□□ -0
HDAC4-205ENST00000454542 CDKAL1Q5VV42 579 aa15.05■□□□□ -0
HDAC4-205ENST00000454542 DENND5BQ6ZUT9 1274 aa15.05■□□□□ -0
HDAC4-205ENST00000454542 C12orf29Q8N999 325 aa15.05■□□□□ -0
HDAC4-205ENST00000454542 SLC4A11Q8NBS3 891 aa15.05■□□□□ -0
HDAC4-205ENST00000454542 ZMIZ2Q8NF64 920 aa15.05■□□□□ -0
HDAC4-205ENST00000454542 SLC2A14Q8TDB8 520 aa15.05■□□□□ -0
HDAC4-205ENST00000454542 SMARCD2Q92925 531 aa15.05■□□□□ -0
HDAC4-205ENST00000454542 ELSPBP1Q96BH3 223 aa15.05■□□□□ -0
HDAC4-205ENST00000454542 ZSWIM3Q96MP5 696 aa15.05■□□□□ -0
HDAC4-205ENST00000454542 HNRNPABQ99729 332 aaKnown RBP15.05■□□□□ -0
HDAC4-205ENST00000454542 C1QTNF1Q9BXJ1 281 aa15.05■□□□□ -0
HDAC4-205ENST00000454542 DMAP1Q9NPF5 467 aaPredicted RBP15.05■□□□□ -0
HDAC4-205ENST00000454542 SLC2A4RGQ9NR83 387 aa15.05■□□□□ -0
HDAC4-205ENST00000454542 KRT82Q9NSB4 513 aa15.05■□□□□ -0
HDAC4-205ENST00000454542 IL37Q9NZH6 218 aa15.05■□□□□ -0
HDAC4-205ENST00000454542 GCNT4Q9P109 453 aa15.05■□□□□ -0
HDAC4-205ENST00000454542 MYO16Q9Y6X6 1858 aa15.05■□□□□ -0
HDAC4-205ENST00000454542 KMT2EQ8IZD2 1858 aa15.04■□□□□ -0
HDAC4-205ENST00000454542 FAM92AA1XBS5 289 aa15.04■□□□□ -0
HDAC4-205ENST00000454542 TNFRSF10BO14763 440 aa15.04■□□□□ -0
HDAC4-205ENST00000454542 NARSO43776 548 aaKnown RBP15.04■□□□□ -0
HDAC4-205ENST00000454542 SRFP11831 508 aa15.04■□□□□ -0
HDAC4-205ENST00000454542 ANXA13P27216 316 aa15.04■□□□□ -0
HDAC4-205ENST00000454542 GRIK1P39086 918 aa15.04■□□□□ -0
HDAC4-205ENST00000454542 ZNF132P52740 706 aa15.04■□□□□ -0
HDAC4-205ENST00000454542 USP46P62068 366 aa15.04■□□□□ -0
HDAC4-205ENST00000454542 YWHAEP62258 255 aaKnown RBP15.04■□□□□ -0
HDAC4-205ENST00000454542 CYP4F8P98187 520 aa15.04■□□□□ -0
HDAC4-205ENST00000454542 MIIPQ5JXC2 388 aa15.04■□□□□ -0
HDAC4-205ENST00000454542 ARHGAP17Q68EM7 881 aa15.04■□□□□ -0
HDAC4-205ENST00000454542 SASS6Q6UVJ0 657 aa15.04■□□□□ -0
HDAC4-205ENST00000454542 TRIM67Q6ZTA4 783 aa15.04■□□□□ -0
HDAC4-205ENST00000454542 ARHGEF19Q8IW93 802 aa15.04■□□□□ -0
HDAC4-205ENST00000454542 SLC44A3Q8N4M1 653 aa15.04■□□□□ -0
HDAC4-205ENST00000454542 EHBP1Q8NDI1 1231 aa15.04■□□□□ -0
HDAC4-205ENST00000454542 ZSCAN18Q8TBC5 510 aaPredicted RBP15.04■□□□□ -0
HDAC4-205ENST00000454542 GCNAQ96QF7 691 aa15.04■□□□□ -0
HDAC4-205ENST00000454542 SMOQ99835 787 aa15.04■□□□□ -0
HDAC4-205ENST00000454542 RPP25Q9BUL9 199 aaKnown RBP15.04■□□□□ -0
HDAC4-205ENST00000454542 INTS2Q9H0H0 1204 aaKnown RBP15.04■□□□□ -0
HDAC4-205ENST00000454542 ATXN3LQ9H3M9 355 aa15.04■□□□□ -0
HDAC4-205ENST00000454542 TASP1Q9H6P5 420 aa15.04■□□□□ -0
HDAC4-205ENST00000454542 PNPLA8Q9NP80 782 aa15.04■□□□□ -0
HDAC4-205ENST00000454542 SAMSN1Q9NSI8 373 aaKnown RBP15.04■□□□□ -0
HDAC4-205ENST00000454542 FAM49BQ9NUQ9 324 aa15.04■□□□□ -0
HDAC4-205ENST00000454542 NFE2L3Q9Y4A8 694 aa15.04■□□□□ -0
HDAC4-205ENST00000454542 COL4A3Q01955 1670 aa15.03■□□□□ -0
HDAC4-205ENST00000454542 AP1G2O75843 785 aa15.03■□□□□ -0
HDAC4-205ENST00000454542 TRIM21P19474 475 aaKnown RBP15.03■□□□□ -0
HDAC4-205ENST00000454542 PTMSP20962 102 aa15.03■□□□□ -0
HDAC4-205ENST00000454542 EEF1GP26641 437 aaKnown RBP15.03■□□□□ -0
HDAC4-205ENST00000454542 TYRO3Q06418 890 aa15.03■□□□□ -0
HDAC4-205ENST00000454542 TPD52L1Q16890 204 aaPredicted RBP15.03■□□□□ -0
HDAC4-205ENST00000454542 ARHGAP15Q53QZ3 475 aa15.03■□□□□ -0
HDAC4-205ENST00000454542 GPR158Q5T848 1215 aa15.03■□□□□ -0
HDAC4-205ENST00000454542 SMYD5Q6GMV2 418 aa15.03■□□□□ -0
HDAC4-205ENST00000454542 TANGO2Q6ICL3 276 aa15.03■□□□□ -0
HDAC4-205ENST00000454542 CAVIN1Q6NZI2 390 aaKnown RBP15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms