RNA–Protein interactions for RNA: ENST00000454233.6

DDX39A-203, Transcript of DExD-box helicase 39A, humanhuman

TSL 3 BASIC

Gene DDX39A, Length 922 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-203ENST00000454233 EHD2Q9NZN4 543 aa11.4□□□□□ -0.58
DDX39A-203ENST00000454233 NUP210Q8TEM1 1887 aaPredicted RBP11.4□□□□□ -0.59
DDX39A-203ENST00000454233 ATP8B3O60423 1300 aa11.39□□□□□ -0.59
DDX39A-203ENST00000454233 WDFY4Q6ZS81 3184 aa11.39□□□□□ -0.59
DDX39A-203ENST00000454233 F5P12259 2224 aa11.39□□□□□ -0.59
DDX39A-203ENST00000454233 ARNTLO00327 626 aa11.39□□□□□ -0.59
DDX39A-203ENST00000454233 CCNE1P24864 410 aa11.39□□□□□ -0.59
DDX39A-203ENST00000454233 VAMP7P51809 220 aa11.39□□□□□ -0.59
DDX39A-203ENST00000454233 DLG4P78352 724 aa11.39□□□□□ -0.59
DDX39A-203ENST00000454233 ZACNQ401N2 412 aa11.39□□□□□ -0.59
DDX39A-203ENST00000454233 CC2D1AQ6P1N0 951 aaPredicted RBP11.39□□□□□ -0.59
DDX39A-203ENST00000454233 SCARA5Q6ZMJ2 495 aa11.39□□□□□ -0.59
DDX39A-203ENST00000454233 INTS8Q75QN2 995 aaKnown RBP11.39□□□□□ -0.59
DDX39A-203ENST00000454233 FAM186BQ8IYM0 893 aa11.39□□□□□ -0.59
DDX39A-203ENST00000454233 FMR1NBQ8N0W7 255 aaPredicted RBP11.39□□□□□ -0.59
DDX39A-203ENST00000454233 B3GALNT2Q8NCR0 500 aa11.39□□□□□ -0.59
DDX39A-203ENST00000454233 TAF4BQ92750 862 aa11.39□□□□□ -0.59
DDX39A-203ENST00000454233 ZFYVE19Q96K21 471 aa11.39□□□□□ -0.59
DDX39A-203ENST00000454233 TNIP3Q96KP6 325 aa11.39□□□□□ -0.59
DDX39A-203ENST00000454233 LRRC3BQ96PB8 259 aa11.39□□□□□ -0.59
DDX39A-203ENST00000454233 IMPG2Q9BZV3 1241 aa11.39□□□□□ -0.59
DDX39A-203ENST00000454233 ELOVL4Q9GZR5 314 aa11.39□□□□□ -0.59
DDX39A-203ENST00000454233 SMG9Q9H0W8 520 aaKnown RBP11.39□□□□□ -0.59
DDX39A-203ENST00000454233 SMYD3Q9H7B4 428 aa11.39□□□□□ -0.59
DDX39A-203ENST00000454233 TRPC7Q9HCX4 862 aa11.39□□□□□ -0.59
DDX39A-203ENST00000454233 TDP1Q9NUW8 608 aa11.39□□□□□ -0.59
DDX39A-203ENST00000454233 HOOK1Q9UJC3 728 aaKnown RBP11.39□□□□□ -0.59
DDX39A-203ENST00000454233 COL4A3Q01955 1670 aa11.39□□□□□ -0.59
DDX39A-203ENST00000454233 TICRRQ7Z2Z1 1910 aa11.39□□□□□ -0.59
DDX39A-203ENST00000454233 TRAV19A0A0A6YYK7 116 aa11.38□□□□□ -0.59
DDX39A-203ENST00000454233 SMC2O95347 1197 aa11.38□□□□□ -0.59
DDX39A-203ENST00000454233 VNN1O95497 513 aa11.38□□□□□ -0.59
DDX39A-203ENST00000454233 USP17L7P0C7H9 530 aa11.38□□□□□ -0.59
DDX39A-203ENST00000454233 SP9P0CG40 484 aa11.38□□□□□ -0.59
DDX39A-203ENST00000454233 TRIM21P19474 475 aaKnown RBP11.38□□□□□ -0.59
DDX39A-203ENST00000454233 PSMC2P35998 433 aaKnown RBP11.38□□□□□ -0.59
DDX39A-203ENST00000454233 PIK3CAP42336 1068 aa11.38□□□□□ -0.59
DDX39A-203ENST00000454233 PDE6CP51160 858 aa11.38□□□□□ -0.59
DDX39A-203ENST00000454233 FAM160A1Q05DH4 1040 aa11.38□□□□□ -0.59
DDX39A-203ENST00000454233 ADAM9Q13443 819 aa11.38□□□□□ -0.59
DDX39A-203ENST00000454233 PNOCQ13519 176 aa11.38□□□□□ -0.59
DDX39A-203ENST00000454233 ZNF268Q14587 947 aaPredicted RBP11.38□□□□□ -0.59
DDX39A-203ENST00000454233 EDRF1Q3B7T1 1238 aa11.38□□□□□ -0.59
DDX39A-203ENST00000454233 DENND5BQ6ZUT9 1274 aa11.38□□□□□ -0.59
DDX39A-203ENST00000454233 SV2AQ7L0J3 742 aa11.38□□□□□ -0.59
DDX39A-203ENST00000454233 RALGPS2Q86X27 583 aaPredicted RBP11.38□□□□□ -0.59
DDX39A-203ENST00000454233 USP13Q92995 863 aaPredicted RBP11.38□□□□□ -0.59
DDX39A-203ENST00000454233 C8orf48Q96LL4 319 aa11.38□□□□□ -0.59
DDX39A-203ENST00000454233 GSDMAQ96QA5 445 aa11.38□□□□□ -0.59
DDX39A-203ENST00000454233 IER2Q9BTL4 223 aa11.38□□□□□ -0.59
DDX39A-203ENST00000454233 MED10Q9BTT4 135 aa11.38□□□□□ -0.59
DDX39A-203ENST00000454233 GTPBP4Q9BZE4 634 aaKnown RBP11.38□□□□□ -0.59
DDX39A-203ENST00000454233 SEMA4AQ9H3S1 761 aa11.38□□□□□ -0.59
DDX39A-203ENST00000454233 DPEP3Q9H4B8 488 aa11.38□□□□□ -0.59
DDX39A-203ENST00000454233 LMAN1LQ9HAT1 526 aa11.38□□□□□ -0.59
DDX39A-203ENST00000454233 GKN1Q9NS71 199 aa11.38□□□□□ -0.59
DDX39A-203ENST00000454233 TRPM5Q9NZQ8 1165 aa11.38□□□□□ -0.59
DDX39A-203ENST00000454233 FBXO4Q9UKT5 387 aa11.38□□□□□ -0.59
DDX39A-203ENST00000454233 PRR23AA6NEV1 266 aa11.37□□□□□ -0.59
DDX39A-203ENST00000454233 SHISA7A6NL88 538 aa11.37□□□□□ -0.59
DDX39A-203ENST00000454233 F8VP50 259 aa11.37□□□□□ -0.59
DDX39A-203ENST00000454233 SPECC1L-ADORA2AF8WAN1 911 aa11.37□□□□□ -0.59
DDX39A-203ENST00000454233 TADA3O75528 432 aa11.37□□□□□ -0.59
DDX39A-203ENST00000454233 AKAP3O75969 853 aa11.37□□□□□ -0.59
DDX39A-203ENST00000454233 HLA-DRAP01903 254 aa11.37□□□□□ -0.59
DDX39A-203ENST00000454233 CKMP06732 381 aa11.37□□□□□ -0.59
DDX39A-203ENST00000454233 CTHP32929 405 aa11.37□□□□□ -0.59
DDX39A-203ENST00000454233 RAP1GAPP47736 663 aa11.37□□□□□ -0.59
DDX39A-203ENST00000454233 SOX9P48436 509 aa11.37□□□□□ -0.59
DDX39A-203ENST00000454233 PPP3CCP48454 512 aa11.37□□□□□ -0.59
DDX39A-203ENST00000454233 CDH8P55286 799 aa11.37□□□□□ -0.59
DDX39A-203ENST00000454233 CSTF1Q05048 431 aaKnown RBP11.37□□□□□ -0.59
DDX39A-203ENST00000454233 ENPEPQ07075 957 aa11.37□□□□□ -0.59
DDX39A-203ENST00000454233 LRRC32Q14392 662 aa11.37□□□□□ -0.59
DDX39A-203ENST00000454233 PPP2R5DQ14738 602 aa11.37□□□□□ -0.59
DDX39A-203ENST00000454233 ITPRIPL2Q3MIP1 535 aa11.37□□□□□ -0.59
DDX39A-203ENST00000454233 ZNF528Q3MIS6 628 aa11.37□□□□□ -0.59
DDX39A-203ENST00000454233 ASCL5Q7RTU5 278 aa11.37□□□□□ -0.59
DDX39A-203ENST00000454233 CCDC150Q8NCX0 1101 aa11.37□□□□□ -0.59
DDX39A-203ENST00000454233 TTC8Q8TAM2 541 aa11.37□□□□□ -0.59
DDX39A-203ENST00000454233 SMARCE1Q969G3 411 aa11.37□□□□□ -0.59
DDX39A-203ENST00000454233 TSG101Q99816 390 aa11.37□□□□□ -0.59
DDX39A-203ENST00000454233 B3GNT5Q9BYG0 378 aa11.37□□□□□ -0.59
DDX39A-203ENST00000454233 ZNF518BQ9C0D4 1074 aa11.37□□□□□ -0.59
DDX39A-203ENST00000454233 CHRDQ9H2X0 955 aa11.37□□□□□ -0.59
DDX39A-203ENST00000454233 GTSE1Q9NYZ3 720 aa11.37□□□□□ -0.59
DDX39A-203ENST00000454233 CCL26Q9Y258 94 aa11.37□□□□□ -0.59
DDX39A-203ENST00000454233 NME7Q9Y5B8 376 aa11.37□□□□□ -0.59
DDX39A-203ENST00000454233 R4GN57 208 aa11.37□□□□□ -0.59
DDX39A-203ENST00000454233 CACNA1IQ9P0X4 2223 aa11.37□□□□□ -0.59
DDX39A-203ENST00000454233 ZNF638Q14966 1978 aaKnown RBP11.37□□□□□ -0.59
DDX39A-203ENST00000454233 COL4A2P08572 1712 aa11.37□□□□□ -0.59
DDX39A-203ENST00000454233 DENND4CQ5VZ89 1909 aa11.37□□□□□ -0.59
DDX39A-203ENST00000454233 CLDN5O00501 218 aa11.36□□□□□ -0.59
DDX39A-203ENST00000454233 CETN3O15182 167 aa11.36□□□□□ -0.59
DDX39A-203ENST00000454233 STX10O60499 249 aa11.36□□□□□ -0.59
DDX39A-203ENST00000454233 ASS1P00966 412 aaKnown RBP11.36□□□□□ -0.59
DDX39A-203ENST00000454233 TRIM49P0CI25 452 aa11.36□□□□□ -0.59
DDX39A-203ENST00000454233 TRIM49CP0CI26 452 aa11.36□□□□□ -0.59
DDX39A-203ENST00000454233 EPB41P11171 864 aaKnown RBP11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms