RNA–Protein interactions for RNA: ENST00000453306.4

VCX3B-204, Transcript of variable charge X-linked 3B, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3B, Length 868 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3B-204ENST00000453306 WNT16Q9UBV4 365 aa16.68■□□□□ 0.26
VCX3B-204ENST00000453306 GTF3C4Q9UKN8 822 aa16.68■□□□□ 0.26
VCX3B-204ENST00000453306 PTPRZ1P23471 2315 aaPredicted RBP16.68■□□□□ 0.26
VCX3B-204ENST00000453306 MYO10Q9HD67 2058 aa16.67■□□□□ 0.26
VCX3B-204ENST00000453306 H7C4K7 107 aa16.67■□□□□ 0.26
VCX3B-204ENST00000453306 ABLIM3O94929 683 aa16.67■□□□□ 0.26
VCX3B-204ENST00000453306 CLSTN1O94985 981 aa16.67■□□□□ 0.26
VCX3B-204ENST00000453306 SEC24AO95486 1093 aa16.67■□□□□ 0.26
VCX3B-204ENST00000453306 SPATA31D3P0C874 917 aa16.67■□□□□ 0.26
VCX3B-204ENST00000453306 P4HA1P13674 534 aa16.67■□□□□ 0.26
VCX3B-204ENST00000453306 PTPN1P18031 435 aaKnown RBP16.67■□□□□ 0.26
VCX3B-204ENST00000453306 ARPP19P56211 112 aa16.67■□□□□ 0.26
VCX3B-204ENST00000453306 POLR2FP61218 127 aaKnown RBP16.67■□□□□ 0.26
VCX3B-204ENST00000453306 ROR1Q01973 937 aa16.67■□□□□ 0.26
VCX3B-204ENST00000453306 DRAP1Q14919 205 aaPredicted RBP16.67■□□□□ 0.26
VCX3B-204ENST00000453306 INTS6LQ5JSJ4 861 aaKnown RBP16.67■□□□□ 0.26
VCX3B-204ENST00000453306 CWF19L1Q69YN2 538 aaKnown RBP16.67■□□□□ 0.26
VCX3B-204ENST00000453306 ZNF280DQ6N043 979 aa16.67■□□□□ 0.26
VCX3B-204ENST00000453306 RNF19BQ6ZMZ0 732 aa16.67■□□□□ 0.26
VCX3B-204ENST00000453306 SPATA31D4Q6ZUB0 917 aa16.67■□□□□ 0.26
VCX3B-204ENST00000453306 ACOT1Q86TX2 421 aa16.67■□□□□ 0.26
VCX3B-204ENST00000453306 TTC9BQ8N6N2 239 aa16.67■□□□□ 0.26
VCX3B-204ENST00000453306 C12orf29Q8N999 325 aa16.67■□□□□ 0.26
VCX3B-204ENST00000453306 ATAD1Q8NBU5 361 aa16.67■□□□□ 0.26
VCX3B-204ENST00000453306 TFAP2BQ92481 460 aa16.67■□□□□ 0.26
VCX3B-204ENST00000453306 BAP1Q92560 729 aa16.67■□□□□ 0.26
VCX3B-204ENST00000453306 NKD2Q969F2 451 aaPredicted RBP16.67■□□□□ 0.26
VCX3B-204ENST00000453306 SYT15Q9BQS2 421 aa16.67■□□□□ 0.26
VCX3B-204ENST00000453306 SNX25Q9H3E2 840 aa16.67■□□□□ 0.26
VCX3B-204ENST00000453306 CACNA1HO95180 2353 aa16.66■□□□□ 0.26
VCX3B-204ENST00000453306 PRR23AA6NEV1 266 aa16.66■□□□□ 0.26
VCX3B-204ENST00000453306 OR6C75A6NL08 312 aa16.66■□□□□ 0.26
VCX3B-204ENST00000453306 A8MXQ7 604 aa16.66■□□□□ 0.26
VCX3B-204ENST00000453306 TGM5O43548 720 aa16.66■□□□□ 0.26
VCX3B-204ENST00000453306 RFPL2O75678 378 aa16.66■□□□□ 0.26
VCX3B-204ENST00000453306 PAPLNO95428 1278 aa16.66■□□□□ 0.26
VCX3B-204ENST00000453306 TBXAS1P24557 533 aaPredicted RBP16.66■□□□□ 0.26
VCX3B-204ENST00000453306 ZNF75DP51815 510 aa16.66■□□□□ 0.26
VCX3B-204ENST00000453306 JAM2P57087 298 aa16.66■□□□□ 0.26
VCX3B-204ENST00000453306 PLCB2Q00722 1185 aa16.66■□□□□ 0.26
VCX3B-204ENST00000453306 GPR17Q13304 367 aa16.66■□□□□ 0.26
VCX3B-204ENST00000453306 CCDC105Q8IYK2 499 aa16.66■□□□□ 0.26
VCX3B-204ENST00000453306 PGLYRP2Q96PD5 576 aa16.66■□□□□ 0.26
VCX3B-204ENST00000453306 B3GNT5Q9BYG0 378 aa16.66■□□□□ 0.26
VCX3B-204ENST00000453306 PRKD2Q9BZL6 878 aa16.66■□□□□ 0.26
VCX3B-204ENST00000453306 NLRC4Q9NPP4 1024 aa16.66■□□□□ 0.26
VCX3B-204ENST00000453306 TMEM30AQ9NV96 361 aa16.66■□□□□ 0.26
VCX3B-204ENST00000453306 ZFP37Q9Y6Q3 630 aaPredicted RBP16.66■□□□□ 0.26
VCX3B-204ENST00000453306 CLDN5O00501 218 aa16.65■□□□□ 0.26
VCX3B-204ENST00000453306 SRFP11831 508 aa16.65■□□□□ 0.26
VCX3B-204ENST00000453306 NPR3P17342 541 aa16.65■□□□□ 0.26
VCX3B-204ENST00000453306 CLCN1P35523 988 aa16.65■□□□□ 0.26
VCX3B-204ENST00000453306 CACNA2D1P54289 1103 aa16.65■□□□□ 0.26
VCX3B-204ENST00000453306 E4F1Q66K89 784 aaPredicted RBP16.65■□□□□ 0.26
VCX3B-204ENST00000453306 PDXDC1Q6P996 788 aa16.65■□□□□ 0.26
VCX3B-204ENST00000453306 TMEM270Q6UE05 265 aa16.65■□□□□ 0.26
VCX3B-204ENST00000453306 ASCL5Q7RTU5 278 aa16.65■□□□□ 0.26
VCX3B-204ENST00000453306 UNC93AQ86WB7 457 aa16.65■□□□□ 0.26
VCX3B-204ENST00000453306 VSTM4Q8IW00 320 aa16.65■□□□□ 0.26
VCX3B-204ENST00000453306 FAM71AQ8IYT1 594 aa16.65■□□□□ 0.26
VCX3B-204ENST00000453306 THEM5Q8N1Q8 247 aa16.65■□□□□ 0.26
VCX3B-204ENST00000453306 STK33Q9BYT3 514 aa16.65■□□□□ 0.26
VCX3B-204ENST00000453306 CDH9Q9ULB4 789 aa16.65■□□□□ 0.26
VCX3B-204ENST00000453306 PCDHB4Q9Y5E5 795 aa16.65■□□□□ 0.26
VCX3B-204ENST00000453306 SPTBN4Q9H254 2564 aa16.65■□□□□ 0.26
VCX3B-204ENST00000453306 TSC2P49815 1807 aa16.64■□□□□ 0.25
VCX3B-204ENST00000453306 ARHGEF37A1IGU5 675 aa16.64■□□□□ 0.25
VCX3B-204ENST00000453306 MTMR11A4FU01 709 aa16.64■□□□□ 0.25
VCX3B-204ENST00000453306 CYP26A1O43174 497 aa16.64■□□□□ 0.25
VCX3B-204ENST00000453306 CFHP08603 1231 aa16.64■□□□□ 0.25
VCX3B-204ENST00000453306 MFAP3P55082 362 aa16.64■□□□□ 0.25
VCX3B-204ENST00000453306 ANGPT1Q15389 498 aa16.64■□□□□ 0.25
VCX3B-204ENST00000453306 SLC39A12Q504Y0 691 aa16.64■□□□□ 0.25
VCX3B-204ENST00000453306 MDH1BQ5I0G3 518 aa16.64■□□□□ 0.25
VCX3B-204ENST00000453306 FUKQ8N0W3 1084 aa16.64■□□□□ 0.25
VCX3B-204ENST00000453306 SLC44A3Q8N4M1 653 aa16.64■□□□□ 0.25
VCX3B-204ENST00000453306 DTWD2Q8NBA8 298 aa16.64■□□□□ 0.25
VCX3B-204ENST00000453306 RBBP8NLQ8NC74 664 aaPredicted RBP16.64■□□□□ 0.25
VCX3B-204ENST00000453306 B3GALNT2Q8NCR0 500 aa16.64■□□□□ 0.25
VCX3B-204ENST00000453306 NEK11Q8NG66 645 aa16.64■□□□□ 0.25
VCX3B-204ENST00000453306 ZNF461Q8TAF7 563 aa16.64■□□□□ 0.25
VCX3B-204ENST00000453306 MYCBPAPQ8TBZ2 947 aa16.64■□□□□ 0.25
VCX3B-204ENST00000453306 JAKMIP2Q96AA8 810 aa16.64■□□□□ 0.25
VCX3B-204ENST00000453306 ZNF707Q96C28 371 aaPredicted RBP16.64■□□□□ 0.25
VCX3B-204ENST00000453306 PCED1BQ96HM7 432 aa16.64■□□□□ 0.25
VCX3B-204ENST00000453306 TMEM176AQ96HP8 235 aa16.64■□□□□ 0.25
VCX3B-204ENST00000453306 PCMTD1Q96MG8 357 aaPredicted RBP16.64■□□□□ 0.25
VCX3B-204ENST00000453306 MYADMQ96S97 322 aa16.64■□□□□ 0.25
VCX3B-204ENST00000453306 NT5C1AQ9BXI3 368 aa16.64■□□□□ 0.25
VCX3B-204ENST00000453306 TRIM5Q9C035 493 aa16.64■□□□□ 0.25
VCX3B-204ENST00000453306 SLC27A5Q9Y2P5 690 aa16.64■□□□□ 0.25
VCX3B-204ENST00000453306 F8VZ95 297 aa16.63■□□□□ 0.25
VCX3B-204ENST00000453306 PI15O43692 258 aa16.63■□□□□ 0.25
VCX3B-204ENST00000453306 NARSO43776 548 aaKnown RBP16.63■□□□□ 0.25
VCX3B-204ENST00000453306 ZMYND10O75800 440 aa16.63■□□□□ 0.25
VCX3B-204ENST00000453306 SOAT2O75908 522 aa16.63■□□□□ 0.25
VCX3B-204ENST00000453306 GYPCP04921 128 aa16.63■□□□□ 0.25
VCX3B-204ENST00000453306 LAMP2P13473 410 aa16.63■□□□□ 0.25
VCX3B-204ENST00000453306 CCDC130P13994 396 aa16.63■□□□□ 0.25
VCX3B-204ENST00000453306 PCSK1P29120 753 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms