RNA–Protein interactions for RNA: ENST00000452489.6

PTPA-223, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 1 (best) BASIC

Gene PTPA, Length 2,526 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-223ENST00000452489 POLIQ9UNA4 740 aa19.49■□□□□ 0.71
PTPA-223ENST00000452489 SF3B1O75533 1304 aaKnown RBP eCLIP19.49■□□□□ 0.712e-6■■■■■ 38.6
PTPA-223ENST00000452489 GOLGA8SH3BPF8 625 aa19.49■□□□□ 0.71
PTPA-223ENST00000452489 GOLGA8MH3BSY2 632 aa19.49■□□□□ 0.71
PTPA-223ENST00000452489 GCNT3O95395 438 aa19.49■□□□□ 0.71
PTPA-223ENST00000452489 DHRS4L1P0CG22 281 aa19.49■□□□□ 0.71
PTPA-223ENST00000452489 SSTR1P30872 391 aa19.49■□□□□ 0.71
PTPA-223ENST00000452489 STAT3P40763 770 aa19.49■□□□□ 0.71
PTPA-223ENST00000452489 AQP5P55064 265 aa19.49■□□□□ 0.71
PTPA-223ENST00000452489 PSMC6P62333 389 aa19.49■□□□□ 0.71
PTPA-223ENST00000452489 ATP1A4Q13733 1029 aa19.49■□□□□ 0.71
PTPA-223ENST00000452489 CYTH1Q15438 398 aa19.49■□□□□ 0.71
PTPA-223ENST00000452489 USP41Q3LFD5 358 aa19.49■□□□□ 0.71
PTPA-223ENST00000452489 HPS6Q86YV9 775 aa19.49■□□□□ 0.71
PTPA-223ENST00000452489 CENPSQ8N2Z9 138 aa19.49■□□□□ 0.71
PTPA-223ENST00000452489 COA7Q96BR5 231 aa19.49■□□□□ 0.71
PTPA-223ENST00000452489 PAFAH2Q99487 392 aa19.49■□□□□ 0.71
PTPA-223ENST00000452489 SHCBP1LQ9BZQ2 653 aa19.49■□□□□ 0.71
PTPA-223ENST00000452489 PAIP1Q9H074 479 aaKnown RBP19.49■□□□□ 0.71
PTPA-223ENST00000452489 RABGEF1Q9UJ41 708 aa19.49■□□□□ 0.71
PTPA-223ENST00000452489 POMPQ9Y244 141 aa19.49■□□□□ 0.71
PTPA-223ENST00000452489 NR2E3Q9Y5X4 410 aa19.49■□□□□ 0.71
PTPA-223ENST00000452489 MEIS1O00470 390 aa19.48■□□□□ 0.71
PTPA-223ENST00000452489 MED24O75448 989 aa19.48■□□□□ 0.71
PTPA-223ENST00000452489 SGPL1O95470 568 aa19.48■□□□□ 0.71
PTPA-223ENST00000452489 HYIQ5T013 277 aa19.48■□□□□ 0.71
PTPA-223ENST00000452489 CHSY1Q86X52 802 aa19.48■□□□□ 0.71
PTPA-223ENST00000452489 ALLCQ8N6M5 410 aa19.48■□□□□ 0.71
PTPA-223ENST00000452489 RILPQ96NA2 401 aa19.48■□□□□ 0.71
PTPA-223ENST00000452489 DCUN1D5Q9BTE7 237 aa19.48■□□□□ 0.71
PTPA-223ENST00000452489 MECRQ9BV79 373 aa19.48■□□□□ 0.71
PTPA-223ENST00000452489 UBE2TQ9NPD8 197 aaPredicted RBP19.48■□□□□ 0.71
PTPA-223ENST00000452489 GIT1Q9Y2X7 761 aa19.48■□□□□ 0.71
PTPA-223ENST00000452489 KDM3AQ9Y4C1 1321 aa19.48■□□□□ 0.71
PTPA-223ENST00000452489 TMX2-CTNND1H3BSU7 103 aa19.48■□□□□ 0.71
PTPA-223ENST00000452489 XPO1O14980 1071 aaKnown RBP19.48■□□□□ 0.71
PTPA-223ENST00000452489 TGFB1I1O43294 461 aa19.48■□□□□ 0.71
PTPA-223ENST00000452489 KCNQ4P56696 695 aa19.48■□□□□ 0.71
PTPA-223ENST00000452489 CDKL1Q00532 357 aa19.48■□□□□ 0.71
PTPA-223ENST00000452489 MTM1Q13496 603 aa19.48■□□□□ 0.71
PTPA-223ENST00000452489 COG2Q14746 738 aa19.48■□□□□ 0.71
PTPA-223ENST00000452489 CES4AQ5XG92 561 aa19.48■□□□□ 0.71
PTPA-223ENST00000452489 TGFBRAP1Q8WUH2 860 aa19.48■□□□□ 0.71
PTPA-223ENST00000452489 ACAP3Q96P50 834 aa19.48■□□□□ 0.71
PTPA-223ENST00000452489 GBA3Q9H227 469 aa19.48■□□□□ 0.71
PTPA-223ENST00000452489 MCM9Q9NXL9 1143 aa19.48■□□□□ 0.71
PTPA-223ENST00000452489 STRIP2Q9ULQ0 834 aa19.48■□□□□ 0.71
PTPA-223ENST00000452489 KCPQ6ZWJ8 1503 aa19.47■□□□□ 0.71
PTPA-223ENST00000452489 CCNG2Q16589 344 aa19.47■□□□□ 0.71
PTPA-223ENST00000452489 CCDC153Q494R4 210 aa19.47■□□□□ 0.71
PTPA-223ENST00000452489 DEPDC1Q5TB30 811 aa19.47■□□□□ 0.71
PTPA-223ENST00000452489 SNRNP48Q6IEG0 339 aaKnown RBP19.47■□□□□ 0.71
PTPA-223ENST00000452489 ARHGEF19Q8IW93 802 aa19.47■□□□□ 0.71
PTPA-223ENST00000452489 GRIN3AQ8TCU5 1115 aa19.47■□□□□ 0.71
PTPA-223ENST00000452489 STARD8Q92502 1023 aa19.47■□□□□ 0.71
PTPA-223ENST00000452489 HSPH1Q92598 858 aa19.47■□□□□ 0.71
PTPA-223ENST00000452489 JADE3Q92613 823 aa19.47■□□□□ 0.71
PTPA-223ENST00000452489 RANBP9Q96S59 729 aa19.47■□□□□ 0.71
PTPA-223ENST00000452489 EBF4Q9BQW3 602 aa19.47■□□□□ 0.71
PTPA-223ENST00000452489 ZNF287Q9HBT7 754 aa19.47■□□□□ 0.71
PTPA-223ENST00000452489 CDH22Q9UJ99 828 aa19.47■□□□□ 0.71
PTPA-223ENST00000452489 RAB26Q9ULW5 256 aa19.47■□□□□ 0.71
PTPA-223ENST00000452489 DNALI1O14645 258 aaPredicted RBP19.47■□□□□ 0.71
PTPA-223ENST00000452489 PROCP04070 461 aa19.47■□□□□ 0.71
PTPA-223ENST00000452489 PSMC2P35998 433 aaKnown RBP19.47■□□□□ 0.71
PTPA-223ENST00000452489 IRX4P78413 519 aa19.47■□□□□ 0.71
PTPA-223ENST00000452489 MYL7Q01449 175 aa19.47■□□□□ 0.71
PTPA-223ENST00000452489 CAMK2BQ13554 666 aa19.47■□□□□ 0.71
PTPA-223ENST00000452489 UBE2SQ16763 222 aa19.47■□□□□ 0.71
PTPA-223ENST00000452489 GALNT4Q8N4A0 578 aa19.47■□□□□ 0.71
PTPA-223ENST00000452489 ACTRT2Q8TDY3 377 aa19.47■□□□□ 0.71
PTPA-223ENST00000452489 WWP1Q9H0M0 922 aa19.47■□□□□ 0.71
PTPA-223ENST00000452489 GNEQ9Y223 722 aaKnown RBP19.47■□□□□ 0.71
PTPA-223ENST00000452489 TIMM22Q9Y584 194 aa19.47■□□□□ 0.71
PTPA-223ENST00000452489 NOX1Q9Y5S8 564 aa19.47■□□□□ 0.71
PTPA-223ENST00000452489 CLUHO75153 1309 aa19.47■□□□□ 0.71
PTPA-223ENST00000452489 CCDC195A0A1B0GUA6 201 aa19.46■□□□□ 0.71
PTPA-223ENST00000452489 CYP1A2P05177 515 aa19.46■□□□□ 0.71
PTPA-223ENST00000452489 FDX1P10109 184 aa19.46■□□□□ 0.71
PTPA-223ENST00000452489 CDH3P22223 829 aa19.46■□□□□ 0.71
PTPA-223ENST00000452489 CCDC142Q17RM4 750 aa19.46■□□□□ 0.71
PTPA-223ENST00000452489 DENND5BQ6ZUT9 1274 aa19.46■□□□□ 0.71
PTPA-223ENST00000452489 LARGE2Q8N3Y3 721 aa19.46■□□□□ 0.71
PTPA-223ENST00000452489 TRIML2Q8N7C3 387 aa19.46■□□□□ 0.71
PTPA-223ENST00000452489 KAT5Q92993 513 aa19.46■□□□□ 0.71
PTPA-223ENST00000452489 ATP6V0A1Q93050 837 aa19.46■□□□□ 0.71
PTPA-223ENST00000452489 SERAC1Q96JX3 654 aa19.46■□□□□ 0.71
PTPA-223ENST00000452489 ATRNL1Q5VV63 1379 aa19.46■□□□□ 0.71
PTPA-223ENST00000452489 DENND3A2RUS2 1198 aa19.46■□□□□ 0.71
PTPA-223ENST00000452489 PPARGP37231 505 aaPredicted RBP19.46■□□□□ 0.71
PTPA-223ENST00000452489 SLC1A1P43005 524 aa19.46■□□□□ 0.71
PTPA-223ENST00000452489 CENPCQ03188 943 aa19.46■□□□□ 0.71
PTPA-223ENST00000452489 GAD2Q05329 585 aa19.46■□□□□ 0.71
PTPA-223ENST00000452489 KLF1Q13351 362 aaPredicted RBP19.46■□□□□ 0.71
PTPA-223ENST00000452489 PGM2L1Q6PCE3 622 aa19.46■□□□□ 0.71
PTPA-223ENST00000452489 ADGRD1Q6QNK2 874 aa19.46■□□□□ 0.71
PTPA-223ENST00000452489 CENPUQ71F23 418 aa19.46■□□□□ 0.71
PTPA-223ENST00000452489 IFNLR1Q8IU57 520 aaPredicted RBP19.46■□□□□ 0.71
PTPA-223ENST00000452489 ZFPM1Q8IX07 1006 aa19.46■□□□□ 0.71
PTPA-223ENST00000452489 PQLC1Q8N2U9 271 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms