RNA–Protein interactions for RNA: ENST00000452483.1

HMGB3P21-201, Transcript of high mobility group box 3 pseudogene 21, humanhuman

BASIC

Gene HMGB3P21, Length 547 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P21-201ENST00000452483 ANXA2P07355 339 aaKnown RBP4.77□□□□□ -1.65
HMGB3P21-201ENST00000452483 SNRPA1P09661 255 aaKnown RBP4.77□□□□□ -1.65
HMGB3P21-201ENST00000452483 LAMP2P13473 410 aa4.77□□□□□ -1.65
HMGB3P21-201ENST00000452483 BTF3P20290 206 aaKnown RBP4.77□□□□□ -1.65
HMGB3P21-201ENST00000452483 CCNCP24863 283 aa4.77□□□□□ -1.65
HMGB3P21-201ENST00000452483 PAFAH1B1P43034 410 aa4.77□□□□□ -1.65
HMGB3P21-201ENST00000452483 SULT1E1P49888 294 aa4.77□□□□□ -1.65
HMGB3P21-201ENST00000452483 CCT4P50991 539 aaKnown RBP4.77□□□□□ -1.65
HMGB3P21-201ENST00000452483 GPC3P51654 580 aa4.77□□□□□ -1.65
HMGB3P21-201ENST00000452483 HK2P52789 917 aa4.77□□□□□ -1.65
HMGB3P21-201ENST00000452483 SLC26A5P58743 744 aa4.77□□□□□ -1.65
HMGB3P21-201ENST00000452483 HTRA4P83105 476 aaPredicted RBP4.77□□□□□ -1.65
HMGB3P21-201ENST00000452483 YWHAHQ04917 246 aaPredicted RBP4.77□□□□□ -1.65
HMGB3P21-201ENST00000452483 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.77□□□□□ -1.65
HMGB3P21-201ENST00000452483 C17orf67Q0P5P2 114 aa4.77□□□□□ -1.65
HMGB3P21-201ENST00000452483 NOGQ13253 232 aa4.77□□□□□ -1.65
HMGB3P21-201ENST00000452483 RABEP1Q15276 862 aa4.77□□□□□ -1.65
HMGB3P21-201ENST00000452483 ARHGAP15Q53QZ3 475 aa4.77□□□□□ -1.65
HMGB3P21-201ENST00000452483 TCP11X2Q5H9J9 407 aa4.77□□□□□ -1.65
HMGB3P21-201ENST00000452483 PRAMEF14Q5SWL7 426 aa4.77□□□□□ -1.65
HMGB3P21-201ENST00000452483 CCDC183Q5T5S1 534 aa4.77□□□□□ -1.65
HMGB3P21-201ENST00000452483 E4F1Q66K89 784 aaPredicted RBP4.77□□□□□ -1.65
HMGB3P21-201ENST00000452483 SLC2A7Q6PXP3 512 aa4.77□□□□□ -1.65
HMGB3P21-201ENST00000452483 PET117Q6UWS5 81 aa4.77□□□□□ -1.65
HMGB3P21-201ENST00000452483 CATSPERGQ6ZRH7 1159 aa4.77□□□□□ -1.65
HMGB3P21-201ENST00000452483 ESPNLQ6ZVH7 1005 aa4.77□□□□□ -1.65
HMGB3P21-201ENST00000452483 LPCAT2Q7L5N7 544 aa4.77□□□□□ -1.65
HMGB3P21-201ENST00000452483 TMEM57Q8N5G2 664 aa4.77□□□□□ -1.65
HMGB3P21-201ENST00000452483 CCDC150Q8NCX0 1101 aa4.77□□□□□ -1.65
HMGB3P21-201ENST00000452483 CSGALNACT1Q8TDX6 532 aa4.77□□□□□ -1.65
HMGB3P21-201ENST00000452483 SMCR8Q8TEV9 937 aaPredicted RBP4.77□□□□□ -1.65
HMGB3P21-201ENST00000452483 COPS5Q92905 334 aa4.77□□□□□ -1.65
HMGB3P21-201ENST00000452483 SIPA1Q96FS4 1042 aa4.77□□□□□ -1.65
HMGB3P21-201ENST00000452483 SNX22Q96L94 193 aa4.77□□□□□ -1.65
HMGB3P21-201ENST00000452483 DACH2Q96NX9 599 aa4.77□□□□□ -1.65
HMGB3P21-201ENST00000452483 KRTAP4-11Q9BYQ6 195 aa4.77□□□□□ -1.65
HMGB3P21-201ENST00000452483 KRTAP4-5Q9BYR2 181 aa4.77□□□□□ -1.65
HMGB3P21-201ENST00000452483 RNPEPQ9H4A4 650 aa4.77□□□□□ -1.65
HMGB3P21-201ENST00000452483 NOD2Q9HC29 1040 aa4.77□□□□□ -1.65
HMGB3P21-201ENST00000452483 SMURF1Q9HCE7 757 aa4.77□□□□□ -1.65
HMGB3P21-201ENST00000452483 NECTIN3Q9NQS3 549 aa4.77□□□□□ -1.65
HMGB3P21-201ENST00000452483 DECR2Q9NUI1 292 aa4.77□□□□□ -1.65
HMGB3P21-201ENST00000452483 AIPL1Q9NZN9 384 aa4.77□□□□□ -1.65
HMGB3P21-201ENST00000452483 COL20A1Q9P218 1284 aa4.77□□□□□ -1.65
HMGB3P21-201ENST00000452483 SMG5Q9UPR3 1016 aaKnown RBP4.77□□□□□ -1.65
HMGB3P21-201ENST00000452483 CAMK2AQ9UQM7 478 aa4.77□□□□□ -1.65
HMGB3P21-201ENST00000452483 ITM2BQ9Y287 266 aa4.77□□□□□ -1.65
HMGB3P21-201ENST00000452483 FAM169AQ9Y6X4 670 aa4.77□□□□□ -1.65
HMGB3P21-201ENST00000452483 RGSL1A5PLK6 1076 aa4.76□□□□□ -1.65
HMGB3P21-201ENST00000452483 ZNF503-AS2A6NEH8 195 aa4.76□□□□□ -1.65
HMGB3P21-201ENST00000452483 C2orf71A6NGG8 1288 aa4.76□□□□□ -1.65
HMGB3P21-201ENST00000452483 CCDC169A6NNP5 214 aa4.76□□□□□ -1.65
HMGB3P21-201ENST00000452483 A8MV72 311 aaPredicted RBP4.76□□□□□ -1.65
HMGB3P21-201ENST00000452483 AP3B1O00203 1094 aa4.76□□□□□ -1.65
HMGB3P21-201ENST00000452483 SCDO00767 359 aa4.76□□□□□ -1.65
HMGB3P21-201ENST00000452483 MCF2LO15068 1137 aa4.76□□□□□ -1.65
HMGB3P21-201ENST00000452483 ASAP2O43150 1006 aa4.76□□□□□ -1.65
HMGB3P21-201ENST00000452483 SIGLEC6O43699 453 aa4.76□□□□□ -1.65
HMGB3P21-201ENST00000452483 EXOC3O60645 756 aa4.76□□□□□ -1.65
HMGB3P21-201ENST00000452483 COQ9O75208 318 aa4.76□□□□□ -1.65
HMGB3P21-201ENST00000452483 PRAMEF1O95521 474 aa4.76□□□□□ -1.65
HMGB3P21-201ENST00000452483 GGPS1O95749 300 aa4.76□□□□□ -1.65
HMGB3P21-201ENST00000452483 GLI1P08151 1106 aa4.76□□□□□ -1.65
HMGB3P21-201ENST00000452483 ZGLP1P0C6A0 271 aa4.76□□□□□ -1.65
HMGB3P21-201ENST00000452483 TOP1P11387 765 aaKnown RBP4.76□□□□□ -1.65
HMGB3P21-201ENST00000452483 C6P13671 934 aa4.76□□□□□ -1.65
HMGB3P21-201ENST00000452483 NPR1P16066 1061 aa4.76□□□□□ -1.65
HMGB3P21-201ENST00000452483 FERP16591 822 aa4.76□□□□□ -1.65
HMGB3P21-201ENST00000452483 TGM1P22735 817 aa4.76□□□□□ -1.65
HMGB3P21-201ENST00000452483 GCH1P30793 250 aa4.76□□□□□ -1.65
HMGB3P21-201ENST00000452483 HSPA1LP34931 641 aa4.76□□□□□ -1.65
HMGB3P21-201ENST00000452483 RFC1P35251 1148 aaPredicted RBP4.76□□□□□ -1.65
HMGB3P21-201ENST00000452483 KRT2P35908 639 aa4.76□□□□□ -1.65
HMGB3P21-201ENST00000452483 BUD31P41223 144 aaPredicted RBP4.76□□□□□ -1.65
HMGB3P21-201ENST00000452483 AMPHP49418 695 aa4.76□□□□□ -1.65
HMGB3P21-201ENST00000452483 HK3P52790 923 aa4.76□□□□□ -1.65
HMGB3P21-201ENST00000452483 RARSP54136 660 aaKnown RBP4.76□□□□□ -1.65
HMGB3P21-201ENST00000452483 SLC12A3P55017 1021 aa4.76□□□□□ -1.65
HMGB3P21-201ENST00000452483 LGALS4P56470 323 aa4.76□□□□□ -1.65
HMGB3P21-201ENST00000452483 RPS16P62249 146 aaKnown RBP4.76□□□□□ -1.65
HMGB3P21-201ENST00000452483 AP2B1P63010 937 aa4.76□□□□□ -1.65
HMGB3P21-201ENST00000452483 NKX6-1P78426 367 aaPredicted RBP4.76□□□□□ -1.65
HMGB3P21-201ENST00000452483 POU4F1Q01851 419 aa4.76□□□□□ -1.65
HMGB3P21-201ENST00000452483 DSC2Q02487 901 aa4.76□□□□□ -1.65
HMGB3P21-201ENST00000452483 TEKQ02763 1124 aa4.76□□□□□ -1.65
HMGB3P21-201ENST00000452483 CBX3Q13185 183 aa4.76□□□□□ -1.65
HMGB3P21-201ENST00000452483 TESK1Q15569 626 aa4.76□□□□□ -1.65
HMGB3P21-201ENST00000452483 GEN1Q17RS7 908 aa4.76□□□□□ -1.65
HMGB3P21-201ENST00000452483 ALG11Q2TAA5 492 aa4.76□□□□□ -1.65
HMGB3P21-201ENST00000452483 SMU1Q2TAY7 513 aa4.76□□□□□ -1.65
HMGB3P21-201ENST00000452483 MAJINQ3KP22 176 aa4.76□□□□□ -1.65
HMGB3P21-201ENST00000452483 CEP55Q53EZ4 464 aa4.76□□□□□ -1.65
HMGB3P21-201ENST00000452483 DEPDC1Q5TB30 811 aa4.76□□□□□ -1.65
HMGB3P21-201ENST00000452483 RRAGBQ5VZM2 374 aa4.76□□□□□ -1.65
HMGB3P21-201ENST00000452483 TAF2Q6P1X5 1199 aa4.76□□□□□ -1.65
HMGB3P21-201ENST00000452483 MTFR2Q6P444 385 aa4.76□□□□□ -1.65
HMGB3P21-201ENST00000452483 RGS9BPQ6ZS82 235 aa4.76□□□□□ -1.65
HMGB3P21-201ENST00000452483 IKBIPQ70UQ0 350 aa4.76□□□□□ -1.65
HMGB3P21-201ENST00000452483 RNF44Q7L0R7 432 aa4.76□□□□□ -1.65
HMGB3P21-201ENST00000452483 GPR149Q86SP6 731 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms