RNA–Protein interactions for RNA: ENST00000452447.1

CHD3-206, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-206ENST00000452447 MYL6P60660 151 aa13.77□□□□□ -0.21
CHD3-206ENST00000452447 LRRC32Q14392 662 aa13.77□□□□□ -0.21
CHD3-206ENST00000452447 MYCBPAPQ8TBZ2 947 aa13.77□□□□□ -0.21
CHD3-206ENST00000452447 ZNF516Q92618 1163 aa13.77□□□□□ -0.21
CHD3-206ENST00000452447 USP13Q92995 863 aaPredicted RBP13.77□□□□□ -0.21
CHD3-206ENST00000452447 MYRFLQ96LU7 910 aa13.77□□□□□ -0.21
CHD3-206ENST00000452447 MRPL45Q9BRJ2 306 aaKnown RBP13.77□□□□□ -0.21
CHD3-206ENST00000452447 TRPC7Q9HCX4 862 aa13.77□□□□□ -0.21
CHD3-206ENST00000452447 CRTAC1Q9NQ79 661 aa13.77□□□□□ -0.21
CHD3-206ENST00000452447 GKN1Q9NS71 199 aa13.77□□□□□ -0.21
CHD3-206ENST00000452447 NXF1Q9UBU9 619 aaKnown RBP13.77□□□□□ -0.21
CHD3-206ENST00000452447 PCDHGA2Q9Y5H1 932 aa13.77□□□□□ -0.21
CHD3-206ENST00000452447 PDXKO00764 312 aa13.76□□□□□ -0.21
CHD3-206ENST00000452447 STAU1O95793 577 aaKnown RBP13.76□□□□□ -0.21
CHD3-206ENST00000452447 RPN1P04843 607 aaKnown RBP13.76□□□□□ -0.21
CHD3-206ENST00000452447 CHRNB1P11230 501 aa13.76□□□□□ -0.21
CHD3-206ENST00000452447 CTHP32929 405 aa13.76□□□□□ -0.21
CHD3-206ENST00000452447 CASP4P49662 377 aa13.76□□□□□ -0.21
CHD3-206ENST00000452447 CCR3P51677 355 aa13.76□□□□□ -0.21
CHD3-206ENST00000452447 NDUFA8P51970 172 aa13.76□□□□□ -0.21
CHD3-206ENST00000452447 TNK2Q07912 1038 aa13.76□□□□□ -0.21
CHD3-206ENST00000452447 ITPRIPL2Q3MIP1 535 aa13.76□□□□□ -0.21
CHD3-206ENST00000452447 MDH1BQ5I0G3 518 aa13.76□□□□□ -0.21
CHD3-206ENST00000452447 CC2D1AQ6P1N0 951 aaPredicted RBP13.76□□□□□ -0.21
CHD3-206ENST00000452447 TSSK4Q6SA08 328 aa13.76□□□□□ -0.21
CHD3-206ENST00000452447 PARD3BQ8TEW8 1205 aa13.76□□□□□ -0.21
CHD3-206ENST00000452447 PCED1BQ96HM7 432 aa13.76□□□□□ -0.21
CHD3-206ENST00000452447 CEP295NLQ96MC4 621 aa13.76□□□□□ -0.21
CHD3-206ENST00000452447 ZSCAN32Q9NX65 697 aa13.76□□□□□ -0.21
CHD3-206ENST00000452447 EHD2Q9NZN4 543 aa13.76□□□□□ -0.21
CHD3-206ENST00000452447 CCL26Q9Y258 94 aa13.76□□□□□ -0.21
CHD3-206ENST00000452447 TRAV19A0A0A6YYK7 116 aa13.75□□□□□ -0.21
CHD3-206ENST00000452447 LRRIQ3A6PVS8 624 aaPredicted RBP13.75□□□□□ -0.21
CHD3-206ENST00000452447 A8MXQ7 604 aa13.75□□□□□ -0.21
CHD3-206ENST00000452447 TRIM66O15016 1216 aa13.75□□□□□ -0.21
CHD3-206ENST00000452447 NR3C1P04150 777 aa13.75□□□□□ -0.21
CHD3-206ENST00000452447 CKMP06732 381 aa13.75□□□□□ -0.21
CHD3-206ENST00000452447 ZNF699Q32M78 642 aa13.75□□□□□ -0.21
CHD3-206ENST00000452447 TXNDC11Q6PKC3 985 aa13.75□□□□□ -0.21
CHD3-206ENST00000452447 MAMSTRQ6ZN01 415 aa13.75□□□□□ -0.21
CHD3-206ENST00000452447 DENND5BQ6ZUT9 1274 aa13.75□□□□□ -0.21
CHD3-206ENST00000452447 SLC9A9Q8IVB4 645 aa13.75□□□□□ -0.21
CHD3-206ENST00000452447 TTC16Q8NEE8 873 aa13.75□□□□□ -0.21
CHD3-206ENST00000452447 CCDC34Q96HJ3 373 aa13.75□□□□□ -0.21
CHD3-206ENST00000452447 SPATA17Q96L03 361 aa13.75□□□□□ -0.21
CHD3-206ENST00000452447 FAM126AQ9BYI3 521 aaPredicted RBP13.75□□□□□ -0.21
CHD3-206ENST00000452447 GZF1Q9H116 711 aaPredicted RBP13.75□□□□□ -0.21
CHD3-206ENST00000452447 KCTD10Q9H3F6 313 aa13.75□□□□□ -0.21
CHD3-206ENST00000452447 PRMT8Q9NR22 394 aaPredicted RBP13.75□□□□□ -0.21
CHD3-206ENST00000452447 FRMD4BQ9Y2L6 1034 aa13.75□□□□□ -0.21
CHD3-206ENST00000452447 SDK1Q7Z5N4 2213 aa13.75□□□□□ -0.21
CHD3-206ENST00000452447 CEP250Q9BV73 2442 aa13.75□□□□□ -0.21
CHD3-206ENST00000452447 A0A1W2PQ27 194 aa13.75□□□□□ -0.21
CHD3-206ENST00000452447 A0A1W2PQ64 194 aa13.75□□□□□ -0.21
CHD3-206ENST00000452447 A0A1W2PQD8 194 aa13.75□□□□□ -0.21
CHD3-206ENST00000452447 CALUO43852 315 aaPredicted RBP13.75□□□□□ -0.21
CHD3-206ENST00000452447 TADA3O75528 432 aa13.75□□□□□ -0.21
CHD3-206ENST00000452447 USP17L7P0C7H9 530 aa13.75□□□□□ -0.21
CHD3-206ENST00000452447 PTPN1P18031 435 aaKnown RBP13.75□□□□□ -0.21
CHD3-206ENST00000452447 CXCL12P48061 93 aa13.75□□□□□ -0.21
CHD3-206ENST00000452447 NRLP54845 237 aa13.75□□□□□ -0.21
CHD3-206ENST00000452447 AMPD2Q01433 879 aa13.75□□□□□ -0.21
CHD3-206ENST00000452447 FAM160A1Q05DH4 1040 aa13.75□□□□□ -0.21
CHD3-206ENST00000452447 NCOA4Q13772 614 aa13.75□□□□□ -0.21
CHD3-206ENST00000452447 ZNF268Q14587 947 aaPredicted RBP13.75□□□□□ -0.21
CHD3-206ENST00000452447 KCNB1Q14721 858 aa13.75□□□□□ -0.21
CHD3-206ENST00000452447 PON2Q15165 354 aa13.75□□□□□ -0.21
CHD3-206ENST00000452447 ZNF667Q5HYK9 610 aa13.75□□□□□ -0.21
CHD3-206ENST00000452447 DGKKQ5KSL6 1271 aa13.75□□□□□ -0.21
CHD3-206ENST00000452447 TDRD10Q5VZ19 366 aaKnown RBP13.75□□□□□ -0.21
CHD3-206ENST00000452447 CEP135Q66GS9 1140 aa13.75□□□□□ -0.21
CHD3-206ENST00000452447 ZBTB44Q8NCP5 570 aa13.75□□□□□ -0.21
CHD3-206ENST00000452447 PLEKHO2Q8TD55 490 aa13.75□□□□□ -0.21
CHD3-206ENST00000452447 TMEM174Q8WUU8 243 aa13.75□□□□□ -0.21
CHD3-206ENST00000452447 CYP2S1Q96SQ9 504 aa13.75□□□□□ -0.21
CHD3-206ENST00000452447 FAM83CQ9BQN1 747 aa13.75□□□□□ -0.21
CHD3-206ENST00000452447 XYLT2Q9H1B5 865 aa13.75□□□□□ -0.21
CHD3-206ENST00000452447 EBF3Q9H4W6 596 aa13.75□□□□□ -0.21
CHD3-206ENST00000452447 RBM12Q9NTZ6 932 aaKnown RBP13.75□□□□□ -0.21
CHD3-206ENST00000452447 DMAC2Q9NW81 257 aa13.75□□□□□ -0.21
CHD3-206ENST00000452447 DMXL1Q9Y485 3027 aa13.74□□□□□ -0.21
CHD3-206ENST00000452447 FAM237AA0A1B0GTK4 181 aa13.74□□□□□ -0.21
CHD3-206ENST00000452447 PDE6CP51160 858 aa13.74□□□□□ -0.21
CHD3-206ENST00000452447 CLDN10P78369 228 aa13.74□□□□□ -0.21
CHD3-206ENST00000452447 RUNX3Q13761 415 aa13.74□□□□□ -0.21
CHD3-206ENST00000452447 BECN1Q14457 450 aa13.74□□□□□ -0.21
CHD3-206ENST00000452447 TRIM68Q6AZZ1 485 aa13.74□□□□□ -0.21
CHD3-206ENST00000452447 KRBA2Q6ZNG9 492 aa13.74□□□□□ -0.21
CHD3-206ENST00000452447 SPEM1Q8N4L4 309 aa13.74□□□□□ -0.21
CHD3-206ENST00000452447 B3GALNT2Q8NCR0 500 aa13.74□□□□□ -0.21
CHD3-206ENST00000452447 RUBCNQ92622 972 aa13.74□□□□□ -0.21
CHD3-206ENST00000452447 ELOVL4Q9GZR5 314 aa13.74□□□□□ -0.21
CHD3-206ENST00000452447 VRTNQ9H8Y1 702 aa13.74□□□□□ -0.21
CHD3-206ENST00000452447 TRPM5Q9NZQ8 1165 aa13.74□□□□□ -0.21
CHD3-206ENST00000452447 DCHS1Q96JQ0 3298 aa13.73□□□□□ -0.21
CHD3-206ENST00000452447 F8VP50 259 aa13.73□□□□□ -0.21
CHD3-206ENST00000452447 RHOBTB3O94955 611 aa13.73□□□□□ -0.21
CHD3-206ENST00000452447 ZNF202O95125 648 aa13.73□□□□□ -0.21
CHD3-206ENST00000452447 C4BPAP04003 597 aaKnown RBP13.73□□□□□ -0.21
CHD3-206ENST00000452447 PRR29P0C7W0 189 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms