RNA–Protein interactions for RNA: ENST00000452372.1

COL9A3-202, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-202ENST00000452372 KRBA1A5PL33 1030 aa21.22■□□□□ 0.99
COL9A3-202ENST00000452372 CILPO75339 1184 aa21.22■□□□□ 0.99
COL9A3-202ENST00000452372 BDNFP23560 247 aa21.22■□□□□ 0.99
COL9A3-202ENST00000452372 CCR2P41597 374 aa21.22■□□□□ 0.99
COL9A3-202ENST00000452372 DDR2Q16832 855 aa21.22■□□□□ 0.99
COL9A3-202ENST00000452372 ACOT1Q86TX2 421 aa21.22■□□□□ 0.99
COL9A3-202ENST00000452372 TMC8Q8IU68 726 aa21.22■□□□□ 0.99
COL9A3-202ENST00000452372 EHBP1Q8NDI1 1231 aa21.22■□□□□ 0.99
COL9A3-202ENST00000452372 ST13P5Q8NFI4 369 aaPredicted RBP21.22■□□□□ 0.99
COL9A3-202ENST00000452372 GIPC2Q8TF65 315 aa21.22■□□□□ 0.99
COL9A3-202ENST00000452372 ATOH1Q92858 354 aaPredicted RBP21.22■□□□□ 0.99
COL9A3-202ENST00000452372 NXPE3Q969Y0 559 aa21.22■□□□□ 0.99
COL9A3-202ENST00000452372 RPP25Q9BUL9 199 aaKnown RBP21.22■□□□□ 0.99
COL9A3-202ENST00000452372 NT5C1AQ9BXI3 368 aa21.22■□□□□ 0.99
COL9A3-202ENST00000452372 B3GNT5Q9BYG0 378 aa21.22■□□□□ 0.99
COL9A3-202ENST00000452372 MFSD1Q9H3U5 465 aa21.22■□□□□ 0.99
COL9A3-202ENST00000452372 WNT16Q9UBV4 365 aa21.22■□□□□ 0.99
COL9A3-202ENST00000452372 HMGXB4Q9UGU5 601 aa21.22■□□□□ 0.99
COL9A3-202ENST00000452372 FAM186AA6NE01 2351 aa21.21■□□□□ 0.99
COL9A3-202ENST00000452372 MYL4P12829 197 aa21.21■□□□□ 0.99
COL9A3-202ENST00000452372 CD58P19256 250 aa21.21■□□□□ 0.99
COL9A3-202ENST00000452372 AOC1P19801 751 aa21.21■□□□□ 0.99
COL9A3-202ENST00000452372 MTIF2P46199 727 aaKnown RBP21.21■□□□□ 0.99
COL9A3-202ENST00000452372 GPR15P49685 360 aa21.21■□□□□ 0.99
COL9A3-202ENST00000452372 CUL2Q13617 745 aa21.21■□□□□ 0.99
COL9A3-202ENST00000452372 HTR4Q13639 388 aa21.21■□□□□ 0.99
COL9A3-202ENST00000452372 C11orf57Q6ZUT1 292 aaPredicted RBP21.21■□□□□ 0.99
COL9A3-202ENST00000452372 SCN4BQ8IWT1 228 aa21.21■□□□□ 0.99
COL9A3-202ENST00000452372 SIX5Q8N196 739 aa21.21■□□□□ 0.99
COL9A3-202ENST00000452372 FLCNQ8NFG4 579 aa21.21■□□□□ 0.99
COL9A3-202ENST00000452372 GPR152Q8TDT2 470 aa21.21■□□□□ 0.99
COL9A3-202ENST00000452372 WHAMMQ8TF30 809 aa21.21■□□□□ 0.99
COL9A3-202ENST00000452372 TCEAL4Q96EI5 215 aa21.21■□□□□ 0.99
COL9A3-202ENST00000452372 IRF2BPLQ9H1B7 796 aa21.21■□□□□ 0.99
COL9A3-202ENST00000452372 CISHQ9NSE2 258 aa21.21■□□□□ 0.99
COL9A3-202ENST00000452372 SAMSN1Q9NSI8 373 aaKnown RBP21.21■□□□□ 0.99
COL9A3-202ENST00000452372 NFE2L3Q9Y4A8 694 aa21.21■□□□□ 0.99
COL9A3-202ENST00000452372 MOSPD3O75425 235 aa21.2■□□□□ 0.98
COL9A3-202ENST00000452372 CFHP08603 1231 aa21.2■□□□□ 0.98
COL9A3-202ENST00000452372 TRIM21P19474 475 aaKnown RBP21.2■□□□□ 0.98
COL9A3-202ENST00000452372 GRIK1P39086 918 aa21.2■□□□□ 0.98
COL9A3-202ENST00000452372 TYRO3Q06418 890 aa21.2■□□□□ 0.98
COL9A3-202ENST00000452372 LRMPQ12912 555 aa21.2■□□□□ 0.98
COL9A3-202ENST00000452372 TAF12Q16514 161 aa21.2■□□□□ 0.98
COL9A3-202ENST00000452372 SDHAF4Q5VUM1 108 aa21.2■□□□□ 0.98
COL9A3-202ENST00000452372 NPAS3Q8IXF0 933 aa21.2■□□□□ 0.98
COL9A3-202ENST00000452372 ING5Q8WYH8 240 aa21.2■□□□□ 0.98
COL9A3-202ENST00000452372 CEP295NLQ96MC4 621 aa21.2■□□□□ 0.98
COL9A3-202ENST00000452372 NT5C1BQ96P26 610 aa21.2■□□□□ 0.98
COL9A3-202ENST00000452372 TWNKQ96RR1 684 aa21.2■□□□□ 0.98
COL9A3-202ENST00000452372 ARID3AQ99856 593 aa21.2■□□□□ 0.98
COL9A3-202ENST00000452372 ELOVL4Q9GZR5 314 aa21.2■□□□□ 0.98
COL9A3-202ENST00000452372 DNAI2Q9GZS0 605 aa21.2■□□□□ 0.98
COL9A3-202ENST00000452372 ZNF334Q9HCZ1 680 aaPredicted RBP21.2■□□□□ 0.98
COL9A3-202ENST00000452372 GDE1Q9NZC3 331 aa21.2■□□□□ 0.98
COL9A3-202ENST00000452372 PROB1E7EW31 1015 aa21.19■□□□□ 0.98
COL9A3-202ENST00000452372 FGF19O95750 216 aa21.19■□□□□ 0.98
COL9A3-202ENST00000452372 CSH1P0DML2 217 aa21.19■□□□□ 0.98
COL9A3-202ENST00000452372 CSH2P0DML3 217 aa21.19■□□□□ 0.98
COL9A3-202ENST00000452372 SRFP11831 508 aa21.19■□□□□ 0.98
COL9A3-202ENST00000452372 HMGA1P17096 107 aaKnown RBP21.19■□□□□ 0.98
COL9A3-202ENST00000452372 CEBPBP17676 345 aa21.19■□□□□ 0.98
COL9A3-202ENST00000452372 TBXAS1P24557 533 aaPredicted RBP21.19■□□□□ 0.98
COL9A3-202ENST00000452372 ORC1Q13415 861 aa21.19■□□□□ 0.98
COL9A3-202ENST00000452372 MAN2A1Q16706 1144 aa21.19■□□□□ 0.98
COL9A3-202ENST00000452372 POTEHQ6S545 545 aa21.19■□□□□ 0.98
COL9A3-202ENST00000452372 PAQR9Q6ZVX9 377 aa21.19■□□□□ 0.98
COL9A3-202ENST00000452372 C12orf29Q8N999 325 aa21.19■□□□□ 0.98
COL9A3-202ENST00000452372 SPATA17Q96L03 361 aa21.19■□□□□ 0.98
COL9A3-202ENST00000452372 C8orf48Q96LL4 319 aa21.19■□□□□ 0.98
COL9A3-202ENST00000452372 ZNF518BQ9C0D4 1074 aa21.19■□□□□ 0.98
COL9A3-202ENST00000452372 FBXL21Q9UKT6 434 aa21.19■□□□□ 0.98
COL9A3-202ENST00000452372 CLDN5O00501 218 aa21.18■□□□□ 0.98
COL9A3-202ENST00000452372 NRG2O14511 850 aaPredicted RBP21.18■□□□□ 0.98
COL9A3-202ENST00000452372 TRIM66O15016 1216 aa21.18■□□□□ 0.98
COL9A3-202ENST00000452372 LETM1O95202 739 aaPredicted RBP21.18■□□□□ 0.98
COL9A3-202ENST00000452372 EEF1GP26641 437 aaKnown RBP21.18■□□□□ 0.98
COL9A3-202ENST00000452372 HSP90AA4PQ58FG1 418 aa21.18■□□□□ 0.98
COL9A3-202ENST00000452372 PARM1Q6UWI2 310 aa21.18■□□□□ 0.98
COL9A3-202ENST00000452372 GAREM2Q75VX8 874 aa21.18■□□□□ 0.98
COL9A3-202ENST00000452372 FUKQ8N0W3 1084 aa21.18■□□□□ 0.98
COL9A3-202ENST00000452372 SHKBP1Q8TBC3 707 aa21.18■□□□□ 0.98
COL9A3-202ENST00000452372 FGF14Q92915 247 aa21.18■□□□□ 0.98
COL9A3-202ENST00000452372 MCRS1Q96EZ8 462 aa21.18■□□□□ 0.98
COL9A3-202ENST00000452372 MYRFLQ96LU7 910 aa21.18■□□□□ 0.98
COL9A3-202ENST00000452372 TUBGCP2Q9BSJ2 902 aa21.18■□□□□ 0.98
COL9A3-202ENST00000452372 IL21Q9HBE4 155 aa21.18■□□□□ 0.98
COL9A3-202ENST00000452372 NUMBLQ9Y6R0 609 aa21.18■□□□□ 0.98
COL9A3-202ENST00000452372 ATP8B3O60423 1300 aa21.18■□□□□ 0.98
COL9A3-202ENST00000452372 GREB1Q4ZG55 1949 aa21.17■□□□□ 0.98
COL9A3-202ENST00000452372 CACNA1IQ9P0X4 2223 aa21.17■□□□□ 0.98
COL9A3-202ENST00000452372 SPTBN4Q9H254 2564 aa21.17■□□□□ 0.98
COL9A3-202ENST00000452372 A0A1W2PRU2 124 aa21.17■□□□□ 0.98
COL9A3-202ENST00000452372 GTPBP10A4D1E9 387 aaKnown RBP21.17■□□□□ 0.98
COL9A3-202ENST00000452372 SLC38A8A6NNN8 435 aa21.17■□□□□ 0.98
COL9A3-202ENST00000452372 KCNJ18B7U540 433 aa21.17■□□□□ 0.98
COL9A3-202ENST00000452372 NOL4O94818 638 aa21.17■□□□□ 0.98
COL9A3-202ENST00000452372 GJA1P17302 382 aa21.17■□□□□ 0.98
COL9A3-202ENST00000452372 ANXA13P27216 316 aa21.17■□□□□ 0.98
COL9A3-202ENST00000452372 GABRR2P28476 465 aa21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms