RNA–Protein interactions for RNA: ENST00000451716.5

COL27A1-202, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 2,865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-202ENST00000451716 hCG_1818297A0A087WSY0 165 aa12.7□□□□□ -0.38
COL27A1-202ENST00000451716 H3BRB1 525 aa12.7□□□□□ -0.38
COL27A1-202ENST00000451716 LRCH4O75427 683 aa12.7□□□□□ -0.38
COL27A1-202ENST00000451716 TJP3O95049 919 aa12.7□□□□□ -0.38
COL27A1-202ENST00000451716 IL18RAPO95256 599 aa12.7□□□□□ -0.38
COL27A1-202ENST00000451716 SNAI1O95863 264 aaPredicted RBP12.7□□□□□ -0.38
COL27A1-202ENST00000451716 ARSEP51690 589 aa12.7□□□□□ -0.38
COL27A1-202ENST00000451716 YWHAEP62258 255 aaKnown RBP12.7□□□□□ -0.38
COL27A1-202ENST00000451716 PIGHQ14442 188 aaPredicted RBP12.7□□□□□ -0.38
COL27A1-202ENST00000451716 LRRC14Q15048 493 aa12.7□□□□□ -0.38
COL27A1-202ENST00000451716 KIZQ2M2Z5 673 aa12.7□□□□□ -0.38
COL27A1-202ENST00000451716 CAPN12Q6ZSI9 719 aa12.7□□□□□ -0.38
COL27A1-202ENST00000451716 EXOC3L1Q86VI1 746 aa12.7□□□□□ -0.38
COL27A1-202ENST00000451716 TRIM42Q8IWZ5 723 aa12.7□□□□□ -0.38
COL27A1-202ENST00000451716 HPDLQ96IR7 371 aa12.7□□□□□ -0.38
COL27A1-202ENST00000451716 HEXIM2Q96MH2 286 aaKnown RBP12.7□□□□□ -0.38
COL27A1-202ENST00000451716 TUT1Q9H6E5 874 aaKnown RBP12.7□□□□□ -0.38
COL27A1-202ENST00000451716 M0QYV0 167 aa12.69□□□□□ -0.38
COL27A1-202ENST00000451716 MICAL2O94851 1124 aa12.69□□□□□ -0.38
COL27A1-202ENST00000451716 AGTP01019 485 aa12.69□□□□□ -0.38
COL27A1-202ENST00000451716 CETPP11597 493 aa12.69□□□□□ -0.38
COL27A1-202ENST00000451716 CDKN2BP42772 138 aa12.69□□□□□ -0.38
COL27A1-202ENST00000451716 PTPN11Q06124 597 aaPredicted RBP12.69□□□□□ -0.38
COL27A1-202ENST00000451716 GPS1Q13098 491 aa12.69□□□□□ -0.38
COL27A1-202ENST00000451716 MTM1Q13496 603 aa12.69□□□□□ -0.38
COL27A1-202ENST00000451716 PREPLQ4J6C6 727 aaPredicted RBP12.69□□□□□ -0.38
COL27A1-202ENST00000451716 RAB6CQ53S08 254 aa12.69□□□□□ -0.38
COL27A1-202ENST00000451716 TFDP3Q5H9I0 405 aa12.69□□□□□ -0.38
COL27A1-202ENST00000451716 ERMARDQ5T6L9 678 aa12.69□□□□□ -0.38
COL27A1-202ENST00000451716 RNF187Q5TA31 235 aaPredicted RBP12.69□□□□□ -0.38
COL27A1-202ENST00000451716 ZNF280DQ6N043 979 aa12.69□□□□□ -0.38
COL27A1-202ENST00000451716 PPP1R2P3Q6NXS1 205 aa12.69□□□□□ -0.38
COL27A1-202ENST00000451716 MTHFD1LQ6UB35 978 aa12.69□□□□□ -0.38
COL27A1-202ENST00000451716 C12orf29Q8N999 325 aa12.69□□□□□ -0.38
COL27A1-202ENST00000451716 PPTC7Q8NI37 304 aa12.69□□□□□ -0.38
COL27A1-202ENST00000451716 ZC3H15Q8WU90 426 aaKnown RBP12.69□□□□□ -0.38
COL27A1-202ENST00000451716 PRMT1Q99873 361 aaKnown RBP12.69□□□□□ -0.38
COL27A1-202ENST00000451716 RAB6CQ9H0N0 254 aa12.69□□□□□ -0.38
COL27A1-202ENST00000451716 CNOT10Q9H9A5 744 aaKnown RBP12.69□□□□□ -0.38
COL27A1-202ENST00000451716 CILPO75339 1184 aa12.69□□□□□ -0.38
COL27A1-202ENST00000451716 SH3PXD2AQ5TCZ1 1133 aa12.69□□□□□ -0.38
COL27A1-202ENST00000451716 CPLX4Q7Z7G2 160 aa12.69□□□□□ -0.38
COL27A1-202ENST00000451716 DPP9Q86TI2 863 aa12.69□□□□□ -0.38
COL27A1-202ENST00000451716 XYLT1Q86Y38 959 aa12.69□□□□□ -0.38
COL27A1-202ENST00000451716 RBM12BQ8IXT5 1001 aaKnown RBP12.69□□□□□ -0.38
COL27A1-202ENST00000451716 CYP4X1Q8N118 509 aa12.69□□□□□ -0.38
COL27A1-202ENST00000451716 SHCBP1Q8NEM2 672 aa12.69□□□□□ -0.38
COL27A1-202ENST00000451716 TMEM176AQ96HP8 235 aa12.69□□□□□ -0.38
COL27A1-202ENST00000451716 RBM15Q96T37 977 aaKnown RBP eCLIP12.69□□□□□ -0.383e-9■□□□□ 8.3
COL27A1-202ENST00000451716 FAM49AQ9H0Q0 323 aaPredicted RBP12.69□□□□□ -0.38
COL27A1-202ENST00000451716 INTS9Q9NV88 658 aaKnown RBP12.69□□□□□ -0.38
COL27A1-202ENST00000451716 CCL15-CCL14A0A0B4J2E2 113 aa12.68□□□□□ -0.38
COL27A1-202ENST00000451716 GOLGA8MH3BSY2 632 aa12.68□□□□□ -0.38
COL27A1-202ENST00000451716 ADCY6O43306 1168 aa12.68□□□□□ -0.38
COL27A1-202ENST00000451716 TSPAN1O60635 241 aa12.68□□□□□ -0.38
COL27A1-202ENST00000451716 GRAP2O75791 330 aa12.68□□□□□ -0.38
COL27A1-202ENST00000451716 PAEPP09466 180 aa12.68□□□□□ -0.38
COL27A1-202ENST00000451716 MCF2P10911 925 aa12.68□□□□□ -0.38
COL27A1-202ENST00000451716 TMEM132DQ14C87 1099 aa12.68□□□□□ -0.38
COL27A1-202ENST00000451716 FASTKD3Q14CZ7 662 aaKnown RBP12.68□□□□□ -0.38
COL27A1-202ENST00000451716 CCL15Q16663 113 aa12.68□□□□□ -0.38
COL27A1-202ENST00000451716 MARCH8Q5T0T0 291 aa12.68□□□□□ -0.38
COL27A1-202ENST00000451716 LINC01465Q8N7H1 131 aa12.68□□□□□ -0.38
COL27A1-202ENST00000451716 ATXN2LQ8WWM7 1075 aaKnown RBP12.68□□□□□ -0.38
COL27A1-202ENST00000451716 EZH1Q92800 747 aaPredicted RBP12.68□□□□□ -0.38
COL27A1-202ENST00000451716 ARHGEF2Q92974 986 aaKnown RBP12.68□□□□□ -0.38
COL27A1-202ENST00000451716 PIWIL1Q96J94 861 aaKnown RBP12.68□□□□□ -0.38
COL27A1-202ENST00000451716 TMEM109Q9BVC6 243 aa12.68□□□□□ -0.38
COL27A1-202ENST00000451716 SETD4Q9NVD3 440 aa12.68□□□□□ -0.38
COL27A1-202ENST00000451716 PNMA3Q9UL41 463 aa12.68□□□□□ -0.38
COL27A1-202ENST00000451716 HES2Q9Y543 173 aa12.68□□□□□ -0.38
COL27A1-202ENST00000451716 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.68□□□□□ -0.38
COL27A1-202ENST00000451716 SIGLEC16A6NMB1 481 aa12.68□□□□□ -0.38
COL27A1-202ENST00000451716 SGK1O00141 431 aa12.68□□□□□ -0.38
COL27A1-202ENST00000451716 MED7O43513 233 aa12.68□□□□□ -0.38
COL27A1-202ENST00000451716 SMPD1P17405 629 aa12.68□□□□□ -0.38
COL27A1-202ENST00000451716 CCNA1P78396 465 aa12.68□□□□□ -0.38
COL27A1-202ENST00000451716 SLC25A11Q02978 314 aaKnown RBP12.68□□□□□ -0.38
COL27A1-202ENST00000451716 HIBCHQ6NVY1 386 aaPredicted RBP12.68□□□□□ -0.38
COL27A1-202ENST00000451716 SPATA21Q7Z572 469 aa12.68□□□□□ -0.38
COL27A1-202ENST00000451716 BRI3BPQ8WY22 251 aa12.68□□□□□ -0.38
COL27A1-202ENST00000451716 HSPH1Q92598 858 aa12.68□□□□□ -0.38
COL27A1-202ENST00000451716 L3MBTL3Q96JM7 780 aaPredicted RBP12.68□□□□□ -0.38
COL27A1-202ENST00000451716 MS4A4AQ96JQ5 239 aa12.68□□□□□ -0.38
COL27A1-202ENST00000451716 CABS1Q96KC9 395 aa12.68□□□□□ -0.38
COL27A1-202ENST00000451716 NFKBIZQ9BYH8 718 aa12.68□□□□□ -0.38
COL27A1-202ENST00000451716 ADAM33Q9BZ11 813 aa12.68□□□□□ -0.38
COL27A1-202ENST00000451716 FAM129AQ9BZQ8 928 aa12.68□□□□□ -0.38
COL27A1-202ENST00000451716 KATNBL1Q9H079 304 aa12.68□□□□□ -0.38
COL27A1-202ENST00000451716 STRIP2Q9ULQ0 834 aa12.68□□□□□ -0.38
COL27A1-202ENST00000451716 C3orf70A6NLC5 250 aaPredicted RBP12.67□□□□□ -0.38
COL27A1-202ENST00000451716 MAGEB2O15479 319 aa12.67□□□□□ -0.38
COL27A1-202ENST00000451716 BANF1O75531 89 aa12.67□□□□□ -0.38
COL27A1-202ENST00000451716 KIAA0754O94854 1291 aa12.67□□□□□ -0.38
COL27A1-202ENST00000451716 CYP3A5P20815 502 aa12.67□□□□□ -0.38
COL27A1-202ENST00000451716 CDR1P51861 262 aa12.67□□□□□ -0.38
COL27A1-202ENST00000451716 NDST1P52848 882 aa12.67□□□□□ -0.38
COL27A1-202ENST00000451716 NRLP54845 237 aa12.67□□□□□ -0.38
COL27A1-202ENST00000451716 NAA25Q14CX7 972 aa12.67□□□□□ -0.38
COL27A1-202ENST00000451716 GRIK4Q16099 956 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms