RNA–Protein interactions for RNA: ENST00000449744.1

CHD3-205, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 880 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-205ENST00000449744 NCOA4Q13772 614 aa16.3■□□□□ 0.2
CHD3-205ENST00000449744 ZNF667Q5HYK9 610 aa16.3■□□□□ 0.2
CHD3-205ENST00000449744 RALGPS2Q86X27 583 aaPredicted RBP16.3■□□□□ 0.2
CHD3-205ENST00000449744 SPATA17Q96L03 361 aa16.3■□□□□ 0.2
CHD3-205ENST00000449744 CEP295NLQ96MC4 621 aa16.3■□□□□ 0.2
CHD3-205ENST00000449744 XYLT2Q9H1B5 865 aa16.3■□□□□ 0.2
CHD3-205ENST00000449744 TDP1Q9NUW8 608 aa16.3■□□□□ 0.2
CHD3-205ENST00000449744 GTSE1Q9NYZ3 720 aa16.3■□□□□ 0.2
CHD3-205ENST00000449744 EHD2Q9NZN4 543 aa16.3■□□□□ 0.2
CHD3-205ENST00000449744 MAPK8IP1Q9UQF2 711 aa16.3■□□□□ 0.2
CHD3-205ENST00000449744 TRAF3IP3Q9Y228 551 aa16.3■□□□□ 0.2
CHD3-205ENST00000449744 RIF1Q5UIP0 2472 aaKnown RBP16.3■□□□□ 0.2
CHD3-205ENST00000449744 COL4A2P08572 1712 aa16.3■□□□□ 0.2
CHD3-205ENST00000449744 TRAV19A0A0A6YYK7 116 aa16.29■□□□□ 0.2
CHD3-205ENST00000449744 SPECC1L-ADORA2AF8WAN1 911 aa16.29■□□□□ 0.2
CHD3-205ENST00000449744 C4BPAP04003 597 aaKnown RBP16.29■□□□□ 0.2
CHD3-205ENST00000449744 P4HA1P13674 534 aa16.29■□□□□ 0.2
CHD3-205ENST00000449744 SOX9P48436 509 aa16.29■□□□□ 0.2
CHD3-205ENST00000449744 DLG4P78352 724 aa16.29■□□□□ 0.2
CHD3-205ENST00000449744 CLDN10P78369 228 aa16.29■□□□□ 0.2
CHD3-205ENST00000449744 FZD5Q13467 585 aa16.29■□□□□ 0.2
CHD3-205ENST00000449744 LRRC32Q14392 662 aa16.29■□□□□ 0.2
CHD3-205ENST00000449744 KCNB1Q14721 858 aa16.29■□□□□ 0.2
CHD3-205ENST00000449744 ZNF528Q3MIS6 628 aa16.29■□□□□ 0.2
CHD3-205ENST00000449744 CC2D1AQ6P1N0 951 aaPredicted RBP16.29■□□□□ 0.2
CHD3-205ENST00000449744 DENND5BQ6ZUT9 1274 aa16.29■□□□□ 0.2
CHD3-205ENST00000449744 MAML2Q8IZL2 1156 aaPredicted RBP16.29■□□□□ 0.2
CHD3-205ENST00000449744 TMC2Q8TDI7 906 aa16.29■□□□□ 0.2
CHD3-205ENST00000449744 USP13Q92995 863 aaPredicted RBP16.29■□□□□ 0.2
CHD3-205ENST00000449744 IER2Q9BTL4 223 aa16.29■□□□□ 0.2
CHD3-205ENST00000449744 CHRDQ9H2X0 955 aa16.29■□□□□ 0.2
CHD3-205ENST00000449744 VRTNQ9H8Y1 702 aa16.29■□□□□ 0.2
CHD3-205ENST00000449744 GKN1Q9NS71 199 aa16.29■□□□□ 0.2
CHD3-205ENST00000449744 TADA3O75528 432 aa16.28■□□□□ 0.2
CHD3-205ENST00000449744 LMNAP02545 664 aaKnown RBP16.28■□□□□ 0.2
CHD3-205ENST00000449744 CKMP06732 381 aa16.28■□□□□ 0.2
CHD3-205ENST00000449744 USP17L7P0C7H9 530 aa16.28■□□□□ 0.2
CHD3-205ENST00000449744 NR2F2P24468 414 aa16.28■□□□□ 0.2
CHD3-205ENST00000449744 RPL13P26373 211 aaKnown RBP16.28■□□□□ 0.2
CHD3-205ENST00000449744 CTHP32929 405 aa16.28■□□□□ 0.2
CHD3-205ENST00000449744 FAM160A1Q05DH4 1040 aa16.28■□□□□ 0.2
CHD3-205ENST00000449744 MTAPQ13126 283 aa16.28■□□□□ 0.2
CHD3-205ENST00000449744 PPP2R5DQ14738 602 aa16.28■□□□□ 0.2
CHD3-205ENST00000449744 SGSM1Q2NKQ1 1148 aa16.28■□□□□ 0.2
CHD3-205ENST00000449744 ITPRIPL2Q3MIP1 535 aa16.28■□□□□ 0.2
CHD3-205ENST00000449744 SCARA5Q6ZMJ2 495 aa16.28■□□□□ 0.2
CHD3-205ENST00000449744 GUF1Q8N442 669 aaKnown RBP16.28■□□□□ 0.2
CHD3-205ENST00000449744 B3GALNT2Q8NCR0 500 aa16.28■□□□□ 0.2
CHD3-205ENST00000449744 TTC16Q8NEE8 873 aa16.28■□□□□ 0.2
CHD3-205ENST00000449744 ELOVL4Q9GZR5 314 aa16.28■□□□□ 0.2
CHD3-205ENST00000449744 DPEP3Q9H4B8 488 aa16.28■□□□□ 0.2
CHD3-205ENST00000449744 SMYD3Q9H7B4 428 aa16.28■□□□□ 0.2
CHD3-205ENST00000449744 CCL26Q9Y258 94 aa16.28■□□□□ 0.2
CHD3-205ENST00000449744 NME7Q9Y5B8 376 aa16.28■□□□□ 0.2
CHD3-205ENST00000449744 ATP8B3O60423 1300 aa16.27■□□□□ 0.2
CHD3-205ENST00000449744 PATJQ8NI35 1801 aa16.27■□□□□ 0.2
CHD3-205ENST00000449744 F8VP50 259 aa16.27■□□□□ 0.2
CHD3-205ENST00000449744 IKBKBO14920 756 aa16.27■□□□□ 0.2
CHD3-205ENST00000449744 MAPK13O15264 365 aa16.27■□□□□ 0.2
CHD3-205ENST00000449744 KINO60870 393 aaKnown RBP16.27■□□□□ 0.2
CHD3-205ENST00000449744 CHRNB1P11230 501 aa16.27■□□□□ 0.2
CHD3-205ENST00000449744 KRT13P13646 458 aa16.27■□□□□ 0.2
CHD3-205ENST00000449744 RAP1GAPP47736 663 aa16.27■□□□□ 0.2
CHD3-205ENST00000449744 PDE6CP51160 858 aa16.27■□□□□ 0.2
CHD3-205ENST00000449744 VAMP7P51809 220 aa16.27■□□□□ 0.2
CHD3-205ENST00000449744 CDH8P55286 799 aa16.27■□□□□ 0.2
CHD3-205ENST00000449744 TNK2Q07912 1038 aa16.27■□□□□ 0.2
CHD3-205ENST00000449744 ZNF268Q14587 947 aaPredicted RBP16.27■□□□□ 0.2
CHD3-205ENST00000449744 ZACNQ401N2 412 aa16.27■□□□□ 0.2
CHD3-205ENST00000449744 INTS8Q75QN2 995 aaKnown RBP16.27■□□□□ 0.2
CHD3-205ENST00000449744 SV2AQ7L0J3 742 aa16.27■□□□□ 0.2
CHD3-205ENST00000449744 ADSSL1Q8N142 457 aa16.27■□□□□ 0.2
CHD3-205ENST00000449744 ZNF687Q8N1G0 1237 aa16.27■□□□□ 0.2
CHD3-205ENST00000449744 ATRIPQ8WXE1 791 aa16.27■□□□□ 0.2
CHD3-205ENST00000449744 TAF4BQ92750 862 aa16.27■□□□□ 0.2
CHD3-205ENST00000449744 TNIP3Q96KP6 325 aa16.27■□□□□ 0.2
CHD3-205ENST00000449744 C8orf48Q96LL4 319 aa16.27■□□□□ 0.2
CHD3-205ENST00000449744 MED10Q9BTT4 135 aa16.27■□□□□ 0.2
CHD3-205ENST00000449744 RMND1Q9NWS8 449 aa16.27■□□□□ 0.2
CHD3-205ENST00000449744 TRPM5Q9NZQ8 1165 aa16.27■□□□□ 0.2
CHD3-205ENST00000449744 DENND4CQ5VZ89 1909 aa16.27■□□□□ 0.19
CHD3-205ENST00000449744 CACNA1IQ9P0X4 2223 aa16.26■□□□□ 0.19
CHD3-205ENST00000449744 ZNF638Q14966 1978 aaKnown RBP16.26■□□□□ 0.19
CHD3-205ENST00000449744 FAM186AA6NE01 2351 aa16.26■□□□□ 0.19
CHD3-205ENST00000449744 VNN1O95497 513 aa16.26■□□□□ 0.19
CHD3-205ENST00000449744 PIK3CAP42336 1068 aa16.26■□□□□ 0.19
CHD3-205ENST00000449744 CCR3P51677 355 aa16.26■□□□□ 0.19
CHD3-205ENST00000449744 ADAM9Q13443 819 aa16.26■□□□□ 0.19
CHD3-205ENST00000449744 RUNX3Q13761 415 aa16.26■□□□□ 0.19
CHD3-205ENST00000449744 PON2Q15165 354 aa16.26■□□□□ 0.19
CHD3-205ENST00000449744 NFIL3Q16649 462 aa16.26■□□□□ 0.19
CHD3-205ENST00000449744 DGKKQ5KSL6 1271 aa16.26■□□□□ 0.19
CHD3-205ENST00000449744 TXNDC11Q6PKC3 985 aa16.26■□□□□ 0.19
CHD3-205ENST00000449744 TSSK4Q6SA08 328 aa16.26■□□□□ 0.19
CHD3-205ENST00000449744 FAM186BQ8IYM0 893 aa16.26■□□□□ 0.19
CHD3-205ENST00000449744 ARL14EPQ8N8R7 260 aaPredicted RBP16.26■□□□□ 0.19
CHD3-205ENST00000449744 CYP2S1Q96SQ9 504 aa16.26■□□□□ 0.19
CHD3-205ENST00000449744 FAM83CQ9BQN1 747 aa16.26■□□□□ 0.19
CHD3-205ENST00000449744 B3GNT5Q9BYG0 378 aa16.26■□□□□ 0.19
CHD3-205ENST00000449744 IMPG2Q9BZV3 1241 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms