RNA–Protein interactions for RNA: ENST00000449413.1

HLA-DRB9-201, Transcript of major histocompatibility complex, class II, DR beta 9 (pseudogene), humanhuman

BASIC

Gene HLA-DRB9, Length 343 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB9-201ENST00000449413 RRAGDQ9NQL2 400 aaPredicted RBP13.46□□□□□ -0.25
HLA-DRB9-201ENST00000449413 MYO1AQ9UBC5 1043 aa13.46□□□□□ -0.25
HLA-DRB9-201ENST00000449413 HESX1Q9UBX0 185 aa13.46□□□□□ -0.25
HLA-DRB9-201ENST00000449413 MRPL42Q9Y6G3 142 aaKnown RBP13.46□□□□□ -0.25
HLA-DRB9-201ENST00000449413 CARNS1A5YM72 827 aa13.45□□□□□ -0.26
HLA-DRB9-201ENST00000449413 NT5C1B-RDH14C9J2C7 533 aa13.45□□□□□ -0.26
HLA-DRB9-201ENST00000449413 ALDH2P05091 517 aa13.45□□□□□ -0.26
HLA-DRB9-201ENST00000449413 SETSIPP0DME0 302 aa13.45□□□□□ -0.26
HLA-DRB9-201ENST00000449413 MYOGP15173 224 aa13.45□□□□□ -0.26
HLA-DRB9-201ENST00000449413 PTPN1P18031 435 aaKnown RBP13.45□□□□□ -0.26
HLA-DRB9-201ENST00000449413 ALDH7A1P49419 539 aaKnown RBP13.45□□□□□ -0.26
HLA-DRB9-201ENST00000449413 HTRA4P83105 476 aaPredicted RBP13.45□□□□□ -0.26
HLA-DRB9-201ENST00000449413 TSPY1Q01534 308 aa13.45□□□□□ -0.26
HLA-DRB9-201ENST00000449413 C1QBPQ07021 282 aaKnown RBP13.45□□□□□ -0.26
HLA-DRB9-201ENST00000449413 BST2Q10589 180 aaKnown RBP13.45□□□□□ -0.26
HLA-DRB9-201ENST00000449413 PDCLQ13371 301 aa13.45□□□□□ -0.26
HLA-DRB9-201ENST00000449413 PKDCCQ504Y2 493 aa13.45□□□□□ -0.26
HLA-DRB9-201ENST00000449413 SPOUT1Q5T280 376 aaKnown RBP13.45□□□□□ -0.26
HLA-DRB9-201ENST00000449413 KIAA0319Q5VV43 1072 aa13.45□□□□□ -0.26
HLA-DRB9-201ENST00000449413 ZNF280DQ6N043 979 aa13.45□□□□□ -0.26
HLA-DRB9-201ENST00000449413 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.45□□□□□ -0.26
HLA-DRB9-201ENST00000449413 MMS22LQ6ZRQ5 1243 aa13.45□□□□□ -0.26
HLA-DRB9-201ENST00000449413 MCOLN2Q8IZK6 566 aa13.45□□□□□ -0.26
HLA-DRB9-201ENST00000449413 THEM5Q8N1Q8 247 aa13.45□□□□□ -0.26
HLA-DRB9-201ENST00000449413 COLGALT1Q8NBJ5 622 aa13.45□□□□□ -0.26
HLA-DRB9-201ENST00000449413 MSANTD4Q8NCY6 345 aa13.45□□□□□ -0.26
HLA-DRB9-201ENST00000449413 OR10T2Q8NGX3 314 aa13.45□□□□□ -0.26
HLA-DRB9-201ENST00000449413 SLC2A14Q8TDB8 520 aa13.45□□□□□ -0.26
HLA-DRB9-201ENST00000449413 MYLPFQ96A32 169 aa13.45□□□□□ -0.26
HLA-DRB9-201ENST00000449413 ZNF558Q96NG5 402 aa13.45□□□□□ -0.26
HLA-DRB9-201ENST00000449413 NOX5Q96PH1 765 aa13.45□□□□□ -0.26
HLA-DRB9-201ENST00000449413 ALS2CR12Q96Q35 445 aa13.45□□□□□ -0.26
HLA-DRB9-201ENST00000449413 ACBD6Q9BR61 282 aa13.45□□□□□ -0.26
HLA-DRB9-201ENST00000449413 CYTH4Q9UIA0 394 aa13.45□□□□□ -0.26
HLA-DRB9-201ENST00000449413 CAPN6Q9Y6Q1 641 aa13.45□□□□□ -0.26
HLA-DRB9-201ENST00000449413 DUSP10Q9Y6W6 482 aa13.45□□□□□ -0.26
HLA-DRB9-201ENST00000449413 PLXNA3P51805 1871 aa13.44□□□□□ -0.26
HLA-DRB9-201ENST00000449413 BUB1O43683 1085 aa13.44□□□□□ -0.26
HLA-DRB9-201ENST00000449413 ATP2C2O75185 946 aa13.44□□□□□ -0.26
HLA-DRB9-201ENST00000449413 MOCS3O95396 460 aa13.44□□□□□ -0.26
HLA-DRB9-201ENST00000449413 CYP1A2P05177 515 aa13.44□□□□□ -0.26
HLA-DRB9-201ENST00000449413 CALB1P05937 261 aa13.44□□□□□ -0.26
HLA-DRB9-201ENST00000449413 TNNT1P13805 278 aa13.44□□□□□ -0.26
HLA-DRB9-201ENST00000449413 ATP2A2P16615 1042 aaKnown RBP13.44□□□□□ -0.26
HLA-DRB9-201ENST00000449413 FGFR3P22607 806 aa13.44□□□□□ -0.26
HLA-DRB9-201ENST00000449413 MMP8P22894 467 aa13.44□□□□□ -0.26
HLA-DRB9-201ENST00000449413 GPD2P43304 727 aa13.44□□□□□ -0.26
HLA-DRB9-201ENST00000449413 GNG11P61952 73 aa13.44□□□□□ -0.26
HLA-DRB9-201ENST00000449413 ETF1P62495 437 aaKnown RBP13.44□□□□□ -0.26
HLA-DRB9-201ENST00000449413 GPC5P78333 572 aa13.44□□□□□ -0.26
HLA-DRB9-201ENST00000449413 PTP4A2Q12974 167 aa13.44□□□□□ -0.26
HLA-DRB9-201ENST00000449413 PTPN20Q4JDL3 420 aa13.44□□□□□ -0.26
HLA-DRB9-201ENST00000449413 VARS2Q5ST30 1063 aaKnown RBP13.44□□□□□ -0.26
HLA-DRB9-201ENST00000449413 LIN9Q5TKA1 542 aa13.44□□□□□ -0.26
HLA-DRB9-201ENST00000449413 FAM171A1Q5VUB5 890 aa13.44□□□□□ -0.26
HLA-DRB9-201ENST00000449413 KCNT2Q6UVM3 1135 aa13.44□□□□□ -0.26
HLA-DRB9-201ENST00000449413 FAM35AQ86V20 835 aa13.44□□□□□ -0.26
HLA-DRB9-201ENST00000449413 HERC6Q8IVU3 1022 aa13.44□□□□□ -0.26
HLA-DRB9-201ENST00000449413 RHOT2Q8IXI1 618 aa13.44□□□□□ -0.26
HLA-DRB9-201ENST00000449413 FUKQ8N0W3 1084 aa13.44□□□□□ -0.26
HLA-DRB9-201ENST00000449413 SLC39A11Q8N1S5 342 aa13.44□□□□□ -0.26
HLA-DRB9-201ENST00000449413 WDTC1Q8N5D0 677 aa13.44□□□□□ -0.26
HLA-DRB9-201ENST00000449413 MYCBPAPQ8TBZ2 947 aa13.44□□□□□ -0.26
HLA-DRB9-201ENST00000449413 IPO4Q8TEX9 1081 aaKnown RBP13.44□□□□□ -0.26
HLA-DRB9-201ENST00000449413 IGSF21Q96ID5 467 aa13.44□□□□□ -0.26
HLA-DRB9-201ENST00000449413 VCPIP1Q96JH7 1222 aa13.44□□□□□ -0.26
HLA-DRB9-201ENST00000449413 PKMYT1Q99640 499 aa13.44□□□□□ -0.26
HLA-DRB9-201ENST00000449413 HNRNPABQ99729 332 aaKnown RBP13.44□□□□□ -0.26
HLA-DRB9-201ENST00000449413 IRX2Q9BZI1 471 aaPredicted RBP13.44□□□□□ -0.26
HLA-DRB9-201ENST00000449413 GPR62Q9BZJ7 368 aa13.44□□□□□ -0.26
HLA-DRB9-201ENST00000449413 AVENQ9NQS1 362 aaPredicted RBP13.44□□□□□ -0.26
HLA-DRB9-201ENST00000449413 KRT82Q9NSB4 513 aa13.44□□□□□ -0.26
HLA-DRB9-201ENST00000449413 ADAM22Q9P0K1 906 aa13.44□□□□□ -0.26
HLA-DRB9-201ENST00000449413 CNOT8Q9UFF9 292 aaKnown RBP13.44□□□□□ -0.26
HLA-DRB9-201ENST00000449413 SALL4Q9UJQ4 1053 aa13.44□□□□□ -0.26
HLA-DRB9-201ENST00000449413 CACNA1AO00555 2505 aa13.43□□□□□ -0.26
HLA-DRB9-201ENST00000449413 MTA2O94776 668 aa13.43□□□□□ -0.26
HLA-DRB9-201ENST00000449413 OAZ2O95190 189 aa13.43□□□□□ -0.26
HLA-DRB9-201ENST00000449413 EFEMP2O95967 443 aa13.43□□□□□ -0.26
HLA-DRB9-201ENST00000449413 TUBB4AP04350 444 aa13.43□□□□□ -0.26
HLA-DRB9-201ENST00000449413 PPM1AP35813 382 aa13.43□□□□□ -0.26
HLA-DRB9-201ENST00000449413 GSCP56915 257 aaPredicted RBP13.43□□□□□ -0.26
HLA-DRB9-201ENST00000449413 PLCB3Q01970 1234 aa13.43□□□□□ -0.26
HLA-DRB9-201ENST00000449413 TCEAL1Q15170 157 aa13.43□□□□□ -0.26
HLA-DRB9-201ENST00000449413 IFI16Q16666 785 aaKnown RBP13.43□□□□□ -0.26
HLA-DRB9-201ENST00000449413 C2CD6Q53TS8 623 aa13.43□□□□□ -0.26
HLA-DRB9-201ENST00000449413 ZNF569Q5MCW4 686 aa13.43□□□□□ -0.26
HLA-DRB9-201ENST00000449413 ERICH1Q86X53 443 aa13.43□□□□□ -0.26
HLA-DRB9-201ENST00000449413 RNF168Q8IYW5 571 aaPredicted RBP13.43□□□□□ -0.26
HLA-DRB9-201ENST00000449413 SLC35F6Q8N357 371 aa13.43□□□□□ -0.26
HLA-DRB9-201ENST00000449413 RNF10Q8N5U6 811 aaKnown RBP13.43□□□□□ -0.26
HLA-DRB9-201ENST00000449413 TRIM58Q8NG06 486 aa13.43□□□□□ -0.26
HLA-DRB9-201ENST00000449413 UBA3Q8TBC4 463 aa13.43□□□□□ -0.26
HLA-DRB9-201ENST00000449413 SP7Q8TDD2 431 aaPredicted RBP13.43□□□□□ -0.26
HLA-DRB9-201ENST00000449413 TMEM169Q96HH4 297 aa13.43□□□□□ -0.26
HLA-DRB9-201ENST00000449413 PCED1BQ96HM7 432 aa13.43□□□□□ -0.26
HLA-DRB9-201ENST00000449413 B3GALT6Q96L58 329 aa13.43□□□□□ -0.26
HLA-DRB9-201ENST00000449413 CPXM1Q96SM3 734 aa13.43□□□□□ -0.26
HLA-DRB9-201ENST00000449413 ZBED2Q9BTP6 218 aa13.43□□□□□ -0.26
HLA-DRB9-201ENST00000449413 MED10Q9BTT4 135 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms