RNA–Protein interactions for RNA: ENST00000449062.1

RTFDC1-204, Transcript of Protein RTF2 homolog, humanhuman

TSL 5

Gene RTFDC1, Length 852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-204ENST00000449062 TAF12Q16514 161 aa15□□□□□ -0.01
RTFDC1-204ENST00000449062 FOXR2Q6PJQ5 311 aa15□□□□□ -0.01
RTFDC1-204ENST00000449062 CLEC17AQ6ZS10 378 aa15□□□□□ -0.01
RTFDC1-204ENST00000449062 SCN4BQ8IWT1 228 aa15□□□□□ -0.01
RTFDC1-204ENST00000449062 CMTM8Q8IZV2 173 aa15□□□□□ -0.01
RTFDC1-204ENST00000449062 B3GALNT2Q8NCR0 500 aa15□□□□□ -0.01
RTFDC1-204ENST00000449062 DNASE1L2Q92874 299 aa15□□□□□ -0.01
RTFDC1-204ENST00000449062 FAM122AQ96E09 287 aa15□□□□□ -0.01
RTFDC1-204ENST00000449062 DHTKD1Q96HY7 919 aaPredicted RBP15□□□□□ -0.01
RTFDC1-204ENST00000449062 SHDQ96IW2 340 aa15□□□□□ -0.01
RTFDC1-204ENST00000449062 TTLL2Q9BWV7 592 aa15□□□□□ -0.01
RTFDC1-204ENST00000449062 SLITRK6Q9H5Y7 841 aa15□□□□□ -0.01
RTFDC1-204ENST00000449062 TMEM8AQ9HCN3 771 aa15□□□□□ -0.01
RTFDC1-204ENST00000449062 ZMYM5Q9UJ78 669 aa15□□□□□ -0.01
RTFDC1-204ENST00000449062 MTF2Q9Y483 593 aaPredicted RBP15□□□□□ -0.01
RTFDC1-204ENST00000449062 EP300Q09472 2414 aaPredicted RBP15□□□□□ -0.01
RTFDC1-204ENST00000449062 KANSL1LA0AUZ9 987 aa14.99□□□□□ -0.01
RTFDC1-204ENST00000449062 TRIM49BA6NDI0 452 aa14.99□□□□□ -0.01
RTFDC1-204ENST00000449062 CLDN5O00501 218 aa14.99□□□□□ -0.01
RTFDC1-204ENST00000449062 CHADO15335 359 aa14.99□□□□□ -0.01
RTFDC1-204ENST00000449062 KRT13P13646 458 aa14.99□□□□□ -0.01
RTFDC1-204ENST00000449062 GDI1P31150 447 aa14.99□□□□□ -0.01
RTFDC1-204ENST00000449062 MLLT6P55198 1093 aaPredicted RBP14.99□□□□□ -0.01
RTFDC1-204ENST00000449062 UBE2HP62256 183 aa14.99□□□□□ -0.01
RTFDC1-204ENST00000449062 LRRC63Q05C16 580 aa14.99□□□□□ -0.01
RTFDC1-204ENST00000449062 ARHGAP15Q53QZ3 475 aa14.99□□□□□ -0.01
RTFDC1-204ENST00000449062 TXNDC8Q6A555 127 aa14.99□□□□□ -0.01
RTFDC1-204ENST00000449062 TTI2Q6NXR4 508 aa14.99□□□□□ -0.01
RTFDC1-204ENST00000449062 UNC93AQ86WB7 457 aa14.99□□□□□ -0.01
RTFDC1-204ENST00000449062 CCDC105Q8IYK2 499 aa14.99□□□□□ -0.01
RTFDC1-204ENST00000449062 WHAMMQ8TF30 809 aa14.99□□□□□ -0.01
RTFDC1-204ENST00000449062 IRF7Q92985 503 aa14.99□□□□□ -0.01
RTFDC1-204ENST00000449062 OSBPL6Q9BZF3 934 aa14.99□□□□□ -0.01
RTFDC1-204ENST00000449062 FOXQ1Q9C009 403 aa14.99□□□□□ -0.01
RTFDC1-204ENST00000449062 ZNF518BQ9C0D4 1074 aa14.99□□□□□ -0.01
RTFDC1-204ENST00000449062 BRD9Q9H8M2 597 aa14.99□□□□□ -0.01
RTFDC1-204ENST00000449062 HEBP1Q9NRV9 189 aa14.99□□□□□ -0.01
RTFDC1-204ENST00000449062 IL37Q9NZH6 218 aa14.99□□□□□ -0.01
RTFDC1-204ENST00000449062 GCNT4Q9P109 453 aa14.99□□□□□ -0.01
RTFDC1-204ENST00000449062 MAGED2Q9UNF1 606 aaPredicted RBP14.99□□□□□ -0.01
RTFDC1-204ENST00000449062 COQ4Q9Y3A0 265 aa14.99□□□□□ -0.01
RTFDC1-204ENST00000449062 SIT1Q9Y3P8 196 aa14.99□□□□□ -0.01
RTFDC1-204ENST00000449062 GPR179Q6PRD1 2367 aa14.98□□□□□ -0.01
RTFDC1-204ENST00000449062 F8VP50 259 aa14.98□□□□□ -0.01
RTFDC1-204ENST00000449062 SLC16A3O15427 465 aaKnown RBP14.98□□□□□ -0.01
RTFDC1-204ENST00000449062 CD72P21854 359 aa14.98□□□□□ -0.01
RTFDC1-204ENST00000449062 DDX6P26196 483 aaKnown RBP eCLIP14.98□□□□□ -0.01
RTFDC1-204ENST00000449062 GRIK1P39086 918 aa14.98□□□□□ -0.01
RTFDC1-204ENST00000449062 NDST1P52848 882 aa14.98□□□□□ -0.01
RTFDC1-204ENST00000449062 PTPN5P54829 565 aa14.98□□□□□ -0.01
RTFDC1-204ENST00000449062 NOP14P78316 857 aaKnown RBP14.98□□□□□ -0.01
RTFDC1-204ENST00000449062 CYP27A1Q02318 531 aa14.98□□□□□ -0.01
RTFDC1-204ENST00000449062 INCA1Q0VD86 236 aa14.98□□□□□ -0.01
RTFDC1-204ENST00000449062 KRT39Q6A163 491 aa14.98□□□□□ -0.01
RTFDC1-204ENST00000449062 FILIP1Q7Z7B0 1213 aa14.98□□□□□ -0.01
RTFDC1-204ENST00000449062 ACOT1Q86TX2 421 aa14.98□□□□□ -0.01
RTFDC1-204ENST00000449062 FUKQ8N0W3 1084 aa14.98□□□□□ -0.01
RTFDC1-204ENST00000449062 MAB21L3Q8N8X9 362 aa14.98□□□□□ -0.01
RTFDC1-204ENST00000449062 DTWD2Q8NBA8 298 aa14.98□□□□□ -0.01
RTFDC1-204ENST00000449062 PJA1Q8NG27 643 aa14.98□□□□□ -0.01
RTFDC1-204ENST00000449062 RIN3Q8TB24 985 aa14.98□□□□□ -0.01
RTFDC1-204ENST00000449062 USP13Q92995 863 aaPredicted RBP14.98□□□□□ -0.01
RTFDC1-204ENST00000449062 CLDN23Q96B33 292 aa14.98□□□□□ -0.01
RTFDC1-204ENST00000449062 FAXDC2Q96IV6 333 aa14.98□□□□□ -0.01
RTFDC1-204ENST00000449062 TWNKQ96RR1 684 aa14.98□□□□□ -0.01
RTFDC1-204ENST00000449062 SLC22A12Q96S37 553 aa14.98□□□□□ -0.01
RTFDC1-204ENST00000449062 CYP2S1Q96SQ9 504 aa14.98□□□□□ -0.01
RTFDC1-204ENST00000449062 SMG9Q9H0W8 520 aaKnown RBP14.98□□□□□ -0.01
RTFDC1-204ENST00000449062 CYP3A43Q9HB55 503 aa14.98□□□□□ -0.01
RTFDC1-204ENST00000449062 UXTQ9UBK9 157 aaPredicted RBP14.98□□□□□ -0.01
RTFDC1-204ENST00000449062 HMGXB4Q9UGU5 601 aa14.98□□□□□ -0.01
RTFDC1-204ENST00000449062 CCL26Q9Y258 94 aa14.98□□□□□ -0.01
RTFDC1-204ENST00000449062 GVINP1Q7Z2Y8 2422 aa14.97□□□□□ -0.01
RTFDC1-204ENST00000449062 COL4A3Q01955 1670 aa14.97□□□□□ -0.01
RTFDC1-204ENST00000449062 TNFRSF10BO14763 440 aa14.97□□□□□ -0.01
RTFDC1-204ENST00000449062 ZNF263O14978 683 aa14.97□□□□□ -0.01
RTFDC1-204ENST00000449062 EPB41P11171 864 aaKnown RBP14.97□□□□□ -0.01
RTFDC1-204ENST00000449062 P4HA1P13674 534 aa14.97□□□□□ -0.01
RTFDC1-204ENST00000449062 PIK3CAP42336 1068 aa14.97□□□□□ -0.01
RTFDC1-204ENST00000449062 ZNF268Q14587 947 aaPredicted RBP14.97□□□□□ -0.01
RTFDC1-204ENST00000449062 SCARA5Q6ZMJ2 495 aa14.97□□□□□ -0.01
RTFDC1-204ENST00000449062 DENND5BQ6ZUT9 1274 aa14.97□□□□□ -0.01
RTFDC1-204ENST00000449062 CELF5Q8N6W0 485 aaKnown RBP14.97□□□□□ -0.01
RTFDC1-204ENST00000449062 SLC35C1Q96A29 364 aa14.97□□□□□ -0.01
RTFDC1-204ENST00000449062 TNIP3Q96KP6 325 aa14.97□□□□□ -0.01
RTFDC1-204ENST00000449062 MED15Q96RN5 788 aa14.97□□□□□ -0.01
RTFDC1-204ENST00000449062 KCNK16Q96T55 309 aa14.97□□□□□ -0.01
RTFDC1-204ENST00000449062 NELL2Q99435 816 aa14.97□□□□□ -0.01
RTFDC1-204ENST00000449062 TSG101Q99816 390 aa14.97□□□□□ -0.01
RTFDC1-204ENST00000449062 FAM83CQ9BQN1 747 aa14.97□□□□□ -0.01
RTFDC1-204ENST00000449062 ELOVL4Q9GZR5 314 aa14.97□□□□□ -0.01
RTFDC1-204ENST00000449062 LTB4R2Q9NPC1 389 aa14.97□□□□□ -0.01
RTFDC1-204ENST00000449062 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.97□□□□□ -0.018e-7■■■■■ 145.8
RTFDC1-204ENST00000449062 DMDP11532 3685 aa14.97□□□□□ -0.01
RTFDC1-204ENST00000449062 FAM186AA6NE01 2351 aa14.96□□□□□ -0.01
RTFDC1-204ENST00000449062 ZNF840PA6NDX5 716 aa14.96□□□□□ -0.01
RTFDC1-204ENST00000449062 FAM170BA6NMN3 283 aa14.96□□□□□ -0.01
RTFDC1-204ENST00000449062 H0Y858 1186 aa14.96□□□□□ -0.01
RTFDC1-204ENST00000449062 BIN1O00499 593 aa14.96□□□□□ -0.01
RTFDC1-204ENST00000449062 STK25O00506 426 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms