RNA–Protein interactions for RNA: ENST00000448539.1

GTF3C3-206, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 796 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-206ENST00000448539 FAM35AQ86V20 835 aa14.89□□□□□ -0.03
GTF3C3-206ENST00000448539 SLC2A14Q8TDB8 520 aa14.89□□□□□ -0.03
GTF3C3-206ENST00000448539 ING5Q8WYH8 240 aa14.89□□□□□ -0.03
GTF3C3-206ENST00000448539 FGF13Q92913 245 aa14.89□□□□□ -0.03
GTF3C3-206ENST00000448539 CYFIP2Q96F07 1278 aa14.89□□□□□ -0.03
GTF3C3-206ENST00000448539 TMEM176AQ96HP8 235 aa14.89□□□□□ -0.03
GTF3C3-206ENST00000448539 SPATA17Q96L03 361 aa14.89□□□□□ -0.03
GTF3C3-206ENST00000448539 CEP295NLQ96MC4 621 aa14.89□□□□□ -0.03
GTF3C3-206ENST00000448539 TWNKQ96RR1 684 aa14.89□□□□□ -0.03
GTF3C3-206ENST00000448539 MYADMQ96S97 322 aa14.89□□□□□ -0.03
GTF3C3-206ENST00000448539 UBE2TQ9NPD8 197 aaPredicted RBP14.89□□□□□ -0.03
GTF3C3-206ENST00000448539 C11orf16Q9NQ32 467 aa14.89□□□□□ -0.03
GTF3C3-206ENST00000448539 EHD2Q9NZN4 543 aa14.89□□□□□ -0.03
GTF3C3-206ENST00000448539 UXTQ9UBK9 157 aaPredicted RBP14.89□□□□□ -0.03
GTF3C3-206ENST00000448539 LIMD1Q9UGP4 676 aa14.89□□□□□ -0.03
GTF3C3-206ENST00000448539 PCDHB4Q9Y5E5 795 aa14.89□□□□□ -0.03
GTF3C3-206ENST00000448539 FAM86C2PA6NEL3 165 aa14.88□□□□□ -0.03
GTF3C3-206ENST00000448539 F8VP50 259 aa14.88□□□□□ -0.03
GTF3C3-206ENST00000448539 AP1G2O75843 785 aa14.88□□□□□ -0.03
GTF3C3-206ENST00000448539 LAMP2P13473 410 aa14.88□□□□□ -0.03
GTF3C3-206ENST00000448539 CCDC130P13994 396 aa14.88□□□□□ -0.03
GTF3C3-206ENST00000448539 SLC9A1P19634 815 aa14.88□□□□□ -0.03
GTF3C3-206ENST00000448539 GABRR2P28476 465 aa14.88□□□□□ -0.03
GTF3C3-206ENST00000448539 ADORA2BP29275 332 aa14.88□□□□□ -0.03
GTF3C3-206ENST00000448539 CDC25CP30307 473 aa14.88□□□□□ -0.03
GTF3C3-206ENST00000448539 EPHA5P54756 1037 aa14.88□□□□□ -0.03
GTF3C3-206ENST00000448539 MFAP3P55082 362 aa14.88□□□□□ -0.03
GTF3C3-206ENST00000448539 TPM4P67936 248 aa14.88□□□□□ -0.03
GTF3C3-206ENST00000448539 KRT31Q15323 416 aa14.88□□□□□ -0.03
GTF3C3-206ENST00000448539 ARHGAP15Q53QZ3 475 aa14.88□□□□□ -0.03
GTF3C3-206ENST00000448539 MIIPQ5JXC2 388 aa14.88□□□□□ -0.03
GTF3C3-206ENST00000448539 TMEM31Q5JXX7 168 aa14.88□□□□□ -0.03
GTF3C3-206ENST00000448539 PRSS36Q5K4E3 855 aa14.88□□□□□ -0.03
GTF3C3-206ENST00000448539 FKBP15Q5T1M5 1219 aa14.88□□□□□ -0.03
GTF3C3-206ENST00000448539 TMEM270Q6UE05 265 aa14.88□□□□□ -0.03
GTF3C3-206ENST00000448539 ENOSF1Q7L5Y1 443 aa14.88□□□□□ -0.03
GTF3C3-206ENST00000448539 RNF135Q8IUD6 432 aa14.88□□□□□ -0.03
GTF3C3-206ENST00000448539 ARHGEF19Q8IW93 802 aa14.88□□□□□ -0.03
GTF3C3-206ENST00000448539 FUKQ8N0W3 1084 aa14.88□□□□□ -0.03
GTF3C3-206ENST00000448539 C12orf29Q8N999 325 aa14.88□□□□□ -0.03
GTF3C3-206ENST00000448539 WHAMMQ8TF30 809 aa14.88□□□□□ -0.03
GTF3C3-206ENST00000448539 MCRS1Q96EZ8 462 aa14.88□□□□□ -0.03
GTF3C3-206ENST00000448539 C8orf48Q96LL4 319 aa14.88□□□□□ -0.03
GTF3C3-206ENST00000448539 HNRNPABQ99729 332 aaKnown RBP14.88□□□□□ -0.03
GTF3C3-206ENST00000448539 FUCA2Q9BTY2 467 aa14.88□□□□□ -0.03
GTF3C3-206ENST00000448539 VPS16Q9H269 839 aa14.88□□□□□ -0.03
GTF3C3-206ENST00000448539 ATXN3LQ9H3M9 355 aa14.88□□□□□ -0.03
GTF3C3-206ENST00000448539 SLITRK6Q9H5Y7 841 aa14.88□□□□□ -0.03
GTF3C3-206ENST00000448539 DMAP1Q9NPF5 467 aaPredicted RBP14.88□□□□□ -0.03
GTF3C3-206ENST00000448539 KRT82Q9NSB4 513 aa14.88□□□□□ -0.03
GTF3C3-206ENST00000448539 GDE1Q9NZC3 331 aa14.88□□□□□ -0.03
GTF3C3-206ENST00000448539 EPS15L1Q9UBC2 864 aa14.88□□□□□ -0.03
GTF3C3-206ENST00000448539 C2orf16Q68DN1 1984 aa14.87□□□□□ -0.03
GTF3C3-206ENST00000448539 A0A1W2PRU2 124 aa14.87□□□□□ -0.03
GTF3C3-206ENST00000448539 GPR37L1O60883 481 aa14.87□□□□□ -0.03
GTF3C3-206ENST00000448539 CAVIN2O95810 425 aa14.87□□□□□ -0.03
GTF3C3-206ENST00000448539 FAM200BP0CF97 657 aa14.87□□□□□ -0.03
GTF3C3-206ENST00000448539 KRT5P13647 590 aa14.87□□□□□ -0.03
GTF3C3-206ENST00000448539 CD19P15391 556 aa14.87□□□□□ -0.03
GTF3C3-206ENST00000448539 CEBPBP17676 345 aa14.87□□□□□ -0.03
GTF3C3-206ENST00000448539 PON1P27169 355 aa14.87□□□□□ -0.03
GTF3C3-206ENST00000448539 RAD23BP54727 409 aa14.87□□□□□ -0.03
GTF3C3-206ENST00000448539 NCAPHQ15003 741 aa14.87□□□□□ -0.03
GTF3C3-206ENST00000448539 PHLDB3Q6NSJ2 640 aa14.87□□□□□ -0.03
GTF3C3-206ENST00000448539 DENND5BQ6ZUT9 1274 aa14.87□□□□□ -0.03
GTF3C3-206ENST00000448539 TMC8Q8IU68 726 aa14.87□□□□□ -0.03
GTF3C3-206ENST00000448539 NPAS3Q8IXF0 933 aa14.87□□□□□ -0.03
GTF3C3-206ENST00000448539 SLC4A11Q8NBS3 891 aa14.87□□□□□ -0.03
GTF3C3-206ENST00000448539 STKLD1Q8NE28 680 aa14.87□□□□□ -0.03
GTF3C3-206ENST00000448539 JAKMIP2Q96AA8 810 aa14.87□□□□□ -0.03
GTF3C3-206ENST00000448539 TCEAL4Q96EI5 215 aa14.87□□□□□ -0.03
GTF3C3-206ENST00000448539 GPR88Q9GZN0 384 aa14.87□□□□□ -0.03
GTF3C3-206ENST00000448539 ZNF334Q9HCZ1 680 aaPredicted RBP14.87□□□□□ -0.03
GTF3C3-206ENST00000448539 APEX2Q9UBZ4 518 aa14.87□□□□□ -0.03
GTF3C3-206ENST00000448539 NOL4O94818 638 aa14.86□□□□□ -0.03
GTF3C3-206ENST00000448539 HMGA1P17096 107 aaKnown RBP14.86□□□□□ -0.03
GTF3C3-206ENST00000448539 GJA1P17302 382 aa14.86□□□□□ -0.03
GTF3C3-206ENST00000448539 CCR2P41597 374 aa14.86□□□□□ -0.03
GTF3C3-206ENST00000448539 MAP3K7CLP57077 242 aa14.86□□□□□ -0.03
GTF3C3-206ENST00000448539 SLC8A3P57103 927 aa14.86□□□□□ -0.03
GTF3C3-206ENST00000448539 MTMR3Q13615 1198 aa14.86□□□□□ -0.03
GTF3C3-206ENST00000448539 TEAD2Q15562 447 aa14.86□□□□□ -0.03
GTF3C3-206ENST00000448539 SGO2Q562F6 1265 aa14.86□□□□□ -0.03
GTF3C3-206ENST00000448539 PPP1R26Q5T8A7 1209 aaPredicted RBP14.86□□□□□ -0.03
GTF3C3-206ENST00000448539 PAQR9Q6ZVX9 377 aa14.86□□□□□ -0.03
GTF3C3-206ENST00000448539 MTSS1LQ765P7 747 aa14.86□□□□□ -0.03
GTF3C3-206ENST00000448539 DHX40Q8IX18 779 aaKnown RBP14.86□□□□□ -0.03
GTF3C3-206ENST00000448539 SHKBP1Q8TBC3 707 aa14.86□□□□□ -0.03
GTF3C3-206ENST00000448539 KAT5Q92993 513 aa14.86□□□□□ -0.03
GTF3C3-206ENST00000448539 NXPE3Q969Y0 559 aa14.86□□□□□ -0.03
GTF3C3-206ENST00000448539 TRMT2BQ96GJ1 504 aaKnown RBP14.86□□□□□ -0.03
GTF3C3-206ENST00000448539 LRRC3Q9BY71 257 aa14.86□□□□□ -0.03
GTF3C3-206ENST00000448539 IGSF9Q9P2J2 1179 aa14.86□□□□□ -0.03
GTF3C3-206ENST00000448539 LIMA1Q9UHB6 759 aaKnown RBP14.86□□□□□ -0.03
GTF3C3-206ENST00000448539 KIAA1257Q9ULG3 409 aa14.86□□□□□ -0.03
GTF3C3-206ENST00000448539 RTN3O95197 1032 aaPredicted RBP14.85□□□□□ -0.03
GTF3C3-206ENST00000448539 PAEPP09466 180 aa14.85□□□□□ -0.03
GTF3C3-206ENST00000448539 VDRP11473 427 aa14.85□□□□□ -0.03
GTF3C3-206ENST00000448539 ZNF18P17022 549 aa14.85□□□□□ -0.03
GTF3C3-206ENST00000448539 COPB1P53618 953 aaKnown RBP14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms