RNA–Protein interactions for RNA: ENST00000448450.5

HTATSF1-203, Transcript of HIV-1 Tat specific factor 1, humanhuman

TSL 5

Gene HTATSF1, Length 1,014 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTATSF1-203ENST00000448450 MDH1BQ5I0G3 518 aa26.71■■□□□ 1.87
HTATSF1-203ENST00000448450 TTI2Q6NXR4 508 aa26.71■■□□□ 1.87
HTATSF1-203ENST00000448450 TMC8Q8IU68 726 aa26.71■■□□□ 1.87
HTATSF1-203ENST00000448450 MAML2Q8IZL2 1156 aaPredicted RBP26.71■■□□□ 1.87
HTATSF1-203ENST00000448450 LEMD2Q8NC56 503 aa26.71■■□□□ 1.87
HTATSF1-203ENST00000448450 STKLD1Q8NE28 680 aa26.71■■□□□ 1.87
HTATSF1-203ENST00000448450 TAF4BQ92750 862 aa26.71■■□□□ 1.87
HTATSF1-203ENST00000448450 MYLPFQ96A32 169 aa26.71■■□□□ 1.87
HTATSF1-203ENST00000448450 KXD1Q9BQD3 176 aa26.71■■□□□ 1.87
HTATSF1-203ENST00000448450 OSBPL6Q9BZF3 934 aa26.71■■□□□ 1.87
HTATSF1-203ENST00000448450 FBXO4Q9UKT5 387 aa26.71■■□□□ 1.87
HTATSF1-203ENST00000448450 GPR179Q6PRD1 2367 aa26.7■■□□□ 1.87
HTATSF1-203ENST00000448450 NCOR2Q9Y618 2525 aa26.7■■□□□ 1.87
HTATSF1-203ENST00000448450 A0A1W2PRU2 124 aa26.7■■□□□ 1.86
HTATSF1-203ENST00000448450 P4HA1P13674 534 aa26.7■■□□□ 1.86
HTATSF1-203ENST00000448450 GTF2H1P32780 548 aa26.7■■□□□ 1.86
HTATSF1-203ENST00000448450 MAGEA9P43362 315 aa26.7■■□□□ 1.86
HTATSF1-203ENST00000448450 PUM1Q14671 1186 aaKnown RBP eCLIP26.7■■□□□ 1.861e-6■■□□□ 12.6
HTATSF1-203ENST00000448450 TEAD2Q15562 447 aa26.7■■□□□ 1.86
HTATSF1-203ENST00000448450 DDR2Q16832 855 aa26.7■■□□□ 1.86
HTATSF1-203ENST00000448450 KRT39Q6A163 491 aa26.7■■□□□ 1.86
HTATSF1-203ENST00000448450 SCN4BQ8IWT1 228 aa26.7■■□□□ 1.86
HTATSF1-203ENST00000448450 TRIML1Q8N9V2 468 aa26.7■■□□□ 1.86
HTATSF1-203ENST00000448450 SHKBP1Q8TBC3 707 aa26.7■■□□□ 1.86
HTATSF1-203ENST00000448450 IMPG2Q9BZV3 1241 aa26.7■■□□□ 1.86
HTATSF1-203ENST00000448450 ABCB6Q9NP58 842 aa26.7■■□□□ 1.86
HTATSF1-203ENST00000448450 GDE1Q9NZC3 331 aa26.7■■□□□ 1.86
HTATSF1-203ENST00000448450 MAGEC2Q9UBF1 373 aaPredicted RBP26.7■■□□□ 1.86
HTATSF1-203ENST00000448450 ARMCX3Q9UH62 379 aaPredicted RBP26.7■■□□□ 1.86
HTATSF1-203ENST00000448450 BICDL2A1A5D9 508 aa26.69■■□□□ 1.86
HTATSF1-203ENST00000448450 STX10O60499 249 aa26.69■■□□□ 1.86
HTATSF1-203ENST00000448450 PTPN1P18031 435 aaKnown RBP26.69■■□□□ 1.86
HTATSF1-203ENST00000448450 MCCD1P59942 119 aaPredicted RBP26.69■■□□□ 1.86
HTATSF1-203ENST00000448450 PAK1Q13153 545 aa26.69■■□□□ 1.86
HTATSF1-203ENST00000448450 C4orf50Q6ZRC1 276 aa26.69■■□□□ 1.86
HTATSF1-203ENST00000448450 MYCBPAPQ8TBZ2 947 aa26.69■■□□□ 1.86
HTATSF1-203ENST00000448450 SEMA4DQ92854 862 aa26.69■■□□□ 1.86
HTATSF1-203ENST00000448450 ZSWIM3Q96MP5 696 aa26.69■■□□□ 1.86
HTATSF1-203ENST00000448450 APOBEC3GQ9HC16 384 aaKnown RBP26.69■■□□□ 1.86
HTATSF1-203ENST00000448450 FAM170BA6NMN3 283 aa26.68■■□□□ 1.86
HTATSF1-203ENST00000448450 MICAL2O94851 1124 aa26.68■■□□□ 1.86
HTATSF1-203ENST00000448450 BDNFP23560 247 aa26.68■■□□□ 1.86
HTATSF1-203ENST00000448450 GABRR2P28476 465 aa26.68■■□□□ 1.86
HTATSF1-203ENST00000448450 MXI1P50539 228 aa26.68■■□□□ 1.86
HTATSF1-203ENST00000448450 RPL10AP62906 217 aaKnown RBP26.68■■□□□ 1.86
HTATSF1-203ENST00000448450 MAPRE1Q15691 268 aaKnown RBP26.68■■□□□ 1.86
HTATSF1-203ENST00000448450 CCDC40Q4G0X9 1142 aa26.68■■□□□ 1.86
HTATSF1-203ENST00000448450 FILIP1Q7Z7B0 1213 aa26.68■■□□□ 1.86
HTATSF1-203ENST00000448450 DCLK2Q8N568 766 aa26.68■■□□□ 1.86
HTATSF1-203ENST00000448450 SUMF1Q8NBK3 374 aa26.68■■□□□ 1.86
HTATSF1-203ENST00000448450 PCED1BQ96HM7 432 aa26.68■■□□□ 1.86
HTATSF1-203ENST00000448450 CEP63Q96MT8 703 aa26.68■■□□□ 1.86
HTATSF1-203ENST00000448450 NUP62CLQ9H1M0 184 aa26.68■■□□□ 1.86
HTATSF1-203ENST00000448450 ATXN3LQ9H3M9 355 aa26.68■■□□□ 1.86
HTATSF1-203ENST00000448450 SLITRK6Q9H5Y7 841 aa26.68■■□□□ 1.86
HTATSF1-203ENST00000448450 LTB4R2Q9NPC1 389 aa26.68■■□□□ 1.86
HTATSF1-203ENST00000448450 MAGED2Q9UNF1 606 aaPredicted RBP26.68■■□□□ 1.86
HTATSF1-203ENST00000448450 MED19A0JLT2 244 aaPredicted RBP26.67■■□□□ 1.86
HTATSF1-203ENST00000448450 NOP14P78316 857 aaKnown RBP26.67■■□□□ 1.86
HTATSF1-203ENST00000448450 CFAP221Q4G0U5 840 aa26.67■■□□□ 1.86
HTATSF1-203ENST00000448450 GAREM2Q75VX8 874 aa26.67■■□□□ 1.86
HTATSF1-203ENST00000448450 CCDC150Q8NCX0 1101 aa26.67■■□□□ 1.86
HTATSF1-203ENST00000448450 FUBP3Q96I24 572 aaKnown RBP eCLIP26.67■■□□□ 1.86
HTATSF1-203ENST00000448450 MTF2Q9Y483 593 aaPredicted RBP26.67■■□□□ 1.86
HTATSF1-203ENST00000448450 PCDHGA2Q9Y5H1 932 aa26.67■■□□□ 1.86
HTATSF1-203ENST00000448450 ASPAP45381 313 aa26.66■■□□□ 1.86
HTATSF1-203ENST00000448450 ORC1Q13415 861 aa26.66■■□□□ 1.86
HTATSF1-203ENST00000448450 CBWD6Q4V339 395 aa26.66■■□□□ 1.86
HTATSF1-203ENST00000448450 CBWD3Q5JTY5 395 aa26.66■■□□□ 1.86
HTATSF1-203ENST00000448450 FAM78AQ5JUQ0 283 aa26.66■■□□□ 1.86
HTATSF1-203ENST00000448450 CBWD5Q5RIA9 395 aa26.66■■□□□ 1.86
HTATSF1-203ENST00000448450 TANGO2Q6ICL3 276 aa26.66■■□□□ 1.86
HTATSF1-203ENST00000448450 TPRG1Q6ZUI0 275 aa26.66■■□□□ 1.86
HTATSF1-203ENST00000448450 GPIHBP1Q8IV16 184 aa26.66■■□□□ 1.86
HTATSF1-203ENST00000448450 B3GALNT2Q8NCR0 500 aa26.66■■□□□ 1.86
HTATSF1-203ENST00000448450 FBXL13Q8NEE6 735 aa26.66■■□□□ 1.86
HTATSF1-203ENST00000448450 SRRTQ9BXP5 876 aaKnown RBP26.66■■□□□ 1.86
HTATSF1-203ENST00000448450 METTL14Q9HCE5 456 aaKnown RBP26.66■■□□□ 1.86
HTATSF1-203ENST00000448450 NCDNQ9UBB6 729 aa26.66■■□□□ 1.86
HTATSF1-203ENST00000448450 NCAM2O15394 837 aa26.65■■□□□ 1.86
HTATSF1-203ENST00000448450 ECI2O75521 394 aa26.65■■□□□ 1.86
HTATSF1-203ENST00000448450 CD72P21854 359 aa26.65■■□□□ 1.86
HTATSF1-203ENST00000448450 GRIK1P39086 918 aa26.65■■□□□ 1.86
HTATSF1-203ENST00000448450 CSTF1Q05048 431 aaKnown RBP26.65■■□□□ 1.86
HTATSF1-203ENST00000448450 STXBP5Q5T5C0 1151 aa26.65■■□□□ 1.86
HTATSF1-203ENST00000448450 ACOT1Q86TX2 421 aa26.65■■□□□ 1.86
HTATSF1-203ENST00000448450 ATRIPQ8WXE1 791 aa26.65■■□□□ 1.86
HTATSF1-203ENST00000448450 NELL2Q99435 816 aa26.65■■□□□ 1.86
HTATSF1-203ENST00000448450 B3GNT5Q9BYG0 378 aa26.65■■□□□ 1.86
HTATSF1-203ENST00000448450 PLA2G2FQ9BZM2 168 aa26.65■■□□□ 1.86
HTATSF1-203ENST00000448450 IL21Q9HBE4 155 aa26.65■■□□□ 1.86
HTATSF1-203ENST00000448450 RAB20Q9NX57 234 aa26.65■■□□□ 1.86
HTATSF1-203ENST00000448450 DLL3Q9NYJ7 618 aa26.65■■□□□ 1.86
HTATSF1-203ENST00000448450 SLC38A8A6NNN8 435 aa26.64■■□□□ 1.86
HTATSF1-203ENST00000448450 GOLGA6L22H0YM25 854 aa26.64■■□□□ 1.86
HTATSF1-203ENST00000448450 CLDN5O00501 218 aa26.64■■□□□ 1.86
HTATSF1-203ENST00000448450 CSH1P0DML2 217 aa26.64■■□□□ 1.86
HTATSF1-203ENST00000448450 CSH2P0DML3 217 aa26.64■■□□□ 1.86
HTATSF1-203ENST00000448450 HMGA1P17096 107 aaKnown RBP26.64■■□□□ 1.86
HTATSF1-203ENST00000448450 MAGEA11P43364 429 aa26.64■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms