RNA–Protein interactions for RNA: ENST00000448310.1

CBX4-202, Transcript of chromobox 4, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CBX4, Length 718 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-202ENST00000448310 TRAPPC11Q7Z392 1133 aa30.27■■■□□ 2.44
CBX4-202ENST00000448310 MMS19Q96T76 1030 aa30.27■■■□□ 2.44
CBX4-202ENST00000448310 FBRSL1Q9HCM7 1045 aaKnown RBP30.27■■■□□ 2.44
CBX4-202ENST00000448310 MAGEC2Q9UBF1 373 aaPredicted RBP30.27■■■□□ 2.44
CBX4-202ENST00000448310 CDH9Q9ULB4 789 aa30.27■■■□□ 2.44
CBX4-202ENST00000448310 SPAG17Q6Q759 2223 aa30.26■■■□□ 2.43
CBX4-202ENST00000448310 TRAV19A0A0A6YYK7 116 aa30.26■■■□□ 2.43
CBX4-202ENST00000448310 PRR5-ARHGAP8B1AHC4 643 aa30.26■■■□□ 2.43
CBX4-202ENST00000448310 TRDMT1O14717 391 aaKnown RBP30.26■■■□□ 2.43
CBX4-202ENST00000448310 CKMP06732 381 aa30.26■■■□□ 2.43
CBX4-202ENST00000448310 RETP07949 1114 aa30.26■■■□□ 2.43
CBX4-202ENST00000448310 CYP2J2P51589 502 aa30.26■■■□□ 2.43
CBX4-202ENST00000448310 ARHGAP8P85298 464 aa30.26■■■□□ 2.43
CBX4-202ENST00000448310 FAM160A1Q05DH4 1040 aa30.26■■■□□ 2.43
CBX4-202ENST00000448310 GRSF1Q12849 480 aaKnown RBP eCLIP30.26■■■□□ 2.43
CBX4-202ENST00000448310 SNRNP35Q16560 246 aaKnown RBP30.26■■■□□ 2.43
CBX4-202ENST00000448310 C4orf50Q6ZRC1 276 aa30.26■■■□□ 2.43
CBX4-202ENST00000448310 ARHGAP30Q7Z6I6 1101 aaPredicted RBP30.26■■■□□ 2.43
CBX4-202ENST00000448310 ARL14EPQ8N8R7 260 aaPredicted RBP30.26■■■□□ 2.43
CBX4-202ENST00000448310 C7orf25Q9BPX7 421 aa30.26■■■□□ 2.43
CBX4-202ENST00000448310 BLZF1Q9H2G9 400 aa30.26■■■□□ 2.43
CBX4-202ENST00000448310 KIAA1586Q9HCI6 787 aa30.26■■■□□ 2.43
CBX4-202ENST00000448310 CDV3Q9UKY7 258 aaKnown RBP30.26■■■□□ 2.43
CBX4-202ENST00000448310 DYNC1LI1Q9Y6G9 523 aaKnown RBP30.26■■■□□ 2.43
CBX4-202ENST00000448310 MYO16Q9Y6X6 1858 aa30.25■■■□□ 2.43
CBX4-202ENST00000448310 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP30.25■■■□□ 2.43
CBX4-202ENST00000448310 C2orf78A6NCI8 922 aa30.25■■■□□ 2.43
CBX4-202ENST00000448310 EGFP01133 1207 aa30.25■■■□□ 2.43
CBX4-202ENST00000448310 USP17L7P0C7H9 530 aa30.25■■■□□ 2.43
CBX4-202ENST00000448310 BDNFP23560 247 aa30.25■■■□□ 2.43
CBX4-202ENST00000448310 CNR2P34972 360 aa30.25■■■□□ 2.43
CBX4-202ENST00000448310 MAGEA11P43364 429 aa30.25■■■□□ 2.43
CBX4-202ENST00000448310 PXNP49023 591 aaPredicted RBP30.25■■■□□ 2.43
CBX4-202ENST00000448310 CYP27A1Q02318 531 aa30.25■■■□□ 2.43
CBX4-202ENST00000448310 PDGFRLQ15198 375 aa30.25■■■□□ 2.43
CBX4-202ENST00000448310 ZNF77Q15935 545 aa30.25■■■□□ 2.43
CBX4-202ENST00000448310 CNNM4Q6P4Q7 775 aa30.25■■■□□ 2.43
CBX4-202ENST00000448310 SCFD1Q8WVM8 642 aa30.25■■■□□ 2.43
CBX4-202ENST00000448310 CCDC127Q96BQ5 260 aa30.25■■■□□ 2.43
CBX4-202ENST00000448310 MRPL45Q9BRJ2 306 aaKnown RBP30.25■■■□□ 2.43
CBX4-202ENST00000448310 POLR3BQ9NW08 1133 aaPredicted RBP30.25■■■□□ 2.43
CBX4-202ENST00000448310 NME7Q9Y5B8 376 aa30.25■■■□□ 2.43
CBX4-202ENST00000448310 WNT6Q9Y6F9 365 aa30.25■■■□□ 2.43
CBX4-202ENST00000448310 EML5Q05BV3 1969 aa30.24■■■□□ 2.43
CBX4-202ENST00000448310 POLR2DO15514 142 aaKnown RBP30.24■■■□□ 2.43
CBX4-202ENST00000448310 CST3P01034 146 aaPredicted RBP30.24■■■□□ 2.43
CBX4-202ENST00000448310 TNNI1P19237 187 aa30.24■■■□□ 2.43
CBX4-202ENST00000448310 WARSP23381 471 aaKnown RBP30.24■■■□□ 2.43
CBX4-202ENST00000448310 USP4Q13107 963 aa30.24■■■□□ 2.43
CBX4-202ENST00000448310 CEP68Q76N32 757 aa30.24■■■□□ 2.43
CBX4-202ENST00000448310 WDR5BQ86VZ2 330 aa30.24■■■□□ 2.43
CBX4-202ENST00000448310 CGRRF1Q99675 332 aa30.24■■■□□ 2.43
CBX4-202ENST00000448310 DUS2Q9NX74 493 aaKnown RBP30.24■■■□□ 2.43
CBX4-202ENST00000448310 GCNT4Q9P109 453 aa30.24■■■□□ 2.43
CBX4-202ENST00000448310 RNF40O75150 1001 aa30.23■■■□□ 2.43
CBX4-202ENST00000448310 SDHBP21912 280 aa30.23■■■□□ 2.43
CBX4-202ENST00000448310 HOXA6P31267 233 aa30.23■■■□□ 2.43
CBX4-202ENST00000448310 GJA4P35212 333 aa30.23■■■□□ 2.43
CBX4-202ENST00000448310 GRIK1P39086 918 aa30.23■■■□□ 2.43
CBX4-202ENST00000448310 GALK1P51570 392 aa30.23■■■□□ 2.43
CBX4-202ENST00000448310 CYP24A1Q07973 514 aa30.23■■■□□ 2.43
CBX4-202ENST00000448310 UNC13DQ70J99 1090 aa30.23■■■□□ 2.43
CBX4-202ENST00000448310 OSCP1Q8WVF1 389 aa30.23■■■□□ 2.43
CBX4-202ENST00000448310 FNBP1Q96RU3 617 aa30.23■■■□□ 2.43
CBX4-202ENST00000448310 ECT2Q9H8V3 914 aa30.23■■■□□ 2.43
CBX4-202ENST00000448310 KIAA1549LQ6ZVL6 1849 aa30.22■■■□□ 2.43
CBX4-202ENST00000448310 USP46P62068 366 aa30.22■■■□□ 2.43
CBX4-202ENST00000448310 EHHADHQ08426 723 aa30.22■■■□□ 2.43
CBX4-202ENST00000448310 PSMD6Q15008 389 aa30.22■■■□□ 2.43
CBX4-202ENST00000448310 MDH1BQ5I0G3 518 aa30.22■■■□□ 2.43
CBX4-202ENST00000448310 VSTM1Q6UX27 236 aa30.22■■■□□ 2.43
CBX4-202ENST00000448310 CPA6Q8N4T0 437 aa30.22■■■□□ 2.43
CBX4-202ENST00000448310 FAM160A2Q8N612 972 aaPredicted RBP30.22■■■□□ 2.43
CBX4-202ENST00000448310 FSIP1Q8NA03 581 aa30.22■■■□□ 2.43
CBX4-202ENST00000448310 XXYLT1Q8NBI6 393 aa30.22■■■□□ 2.43
CBX4-202ENST00000448310 PCED1BQ96HM7 432 aa30.22■■■□□ 2.43
CBX4-202ENST00000448310 SEMA4GQ9NTN9 838 aa30.22■■■□□ 2.43
CBX4-202ENST00000448310 UBE4BO95155 1302 aa30.22■■■□□ 2.43
CBX4-202ENST00000448310 IFNAR2P48551 515 aa30.21■■■□□ 2.43
CBX4-202ENST00000448310 AMPD2Q01433 879 aa30.21■■■□□ 2.43
CBX4-202ENST00000448310 KCNB1Q14721 858 aa30.21■■■□□ 2.43
CBX4-202ENST00000448310 MAPRE1Q15691 268 aaKnown RBP30.21■■■□□ 2.43
CBX4-202ENST00000448310 SH3RF2Q8TEC5 729 aa30.21■■■□□ 2.43
CBX4-202ENST00000448310 SPATA17Q96L03 361 aa30.21■■■□□ 2.43
CBX4-202ENST00000448310 P2RY13Q9BPV8 354 aa30.21■■■□□ 2.43
CBX4-202ENST00000448310 SNX25Q9H3E2 840 aa30.21■■■□□ 2.43
CBX4-202ENST00000448310 SLC39A2Q9NP94 309 aa30.21■■■□□ 2.43
CBX4-202ENST00000448310 DCDC2BA2VCK2 349 aa30.2■■■□□ 2.43
CBX4-202ENST00000448310 HDCP19113 662 aa30.2■■■□□ 2.43
CBX4-202ENST00000448310 ANXA13P27216 316 aa30.2■■■□□ 2.43
CBX4-202ENST00000448310 GNL1P36915 607 aaPredicted RBP30.2■■■□□ 2.43
CBX4-202ENST00000448310 AFMP43652 599 aa30.2■■■□□ 2.43
CBX4-202ENST00000448310 OR6B3Q8NGW1 331 aa30.2■■■□□ 2.43
CBX4-202ENST00000448310 MYCBPAPQ8TBZ2 947 aa30.2■■■□□ 2.43
CBX4-202ENST00000448310 ZNF516Q92618 1163 aa30.2■■■□□ 2.43
CBX4-202ENST00000448310 SNX21Q969T3 373 aa30.2■■■□□ 2.43
CBX4-202ENST00000448310 GZF1Q9H116 711 aaPredicted RBP30.2■■■□□ 2.43
CBX4-202ENST00000448310 MAGEF1Q9HAY2 307 aa30.2■■■□□ 2.43
CBX4-202ENST00000448310 PCDHA7Q9UN72 937 aa30.2■■■□□ 2.43
CBX4-202ENST00000448310 SLC8A2Q9UPR5 921 aa30.2■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms