RNA–Protein interactions for RNA: ENST00000447360.6

LRRC28-203, Transcript of leucine rich repeat containing 28, humanhuman

TSL 1 (best) BASIC

Gene LRRC28, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-203ENST00000447360 WNT7AO00755 349 aa7.65□□□□□ -1.18
LRRC28-203ENST00000447360 PFKFB2O60825 505 aa7.65□□□□□ -1.18
LRRC28-203ENST00000447360 GJB3O75712 270 aa7.65□□□□□ -1.18
LRRC28-203ENST00000447360 CTDNEP1O95476 244 aa7.65□□□□□ -1.18
LRRC28-203ENST00000447360 SPTA1P02549 2419 aa7.65□□□□□ -1.18
LRRC28-203ENST00000447360 USP17L7P0C7H9 530 aa7.65□□□□□ -1.18
LRRC28-203ENST00000447360 HNRNPLP14866 589 aaKnown RBP eCLIP7.65□□□□□ -1.181e-7■■■□□ 14.9
LRRC28-203ENST00000447360 TCF3P15923 654 aa7.65□□□□□ -1.18
LRRC28-203ENST00000447360 OPRD1P41143 372 aa7.65□□□□□ -1.18
LRRC28-203ENST00000447360 PPP2R3AQ06190 1150 aa7.65□□□□□ -1.18
LRRC28-203ENST00000447360 ZNF33AQ06730 810 aa7.65□□□□□ -1.18
LRRC28-203ENST00000447360 SPAG1Q07617 926 aa7.65□□□□□ -1.18
LRRC28-203ENST00000447360 STRN3Q13033 797 aa7.65□□□□□ -1.18
LRRC28-203ENST00000447360 USP4Q13107 963 aa7.65□□□□□ -1.18
LRRC28-203ENST00000447360 SEZ6Q53EL9 994 aa7.65□□□□□ -1.18
LRRC28-203ENST00000447360 EOGTQ5NDL2 527 aa7.65□□□□□ -1.18
LRRC28-203ENST00000447360 SPATA1Q5VX52 437 aa7.65□□□□□ -1.18
LRRC28-203ENST00000447360 ZPBP2Q6X784 338 aa7.65□□□□□ -1.18
LRRC28-203ENST00000447360 SLC36A4Q6YBV0 504 aa7.65□□□□□ -1.18
LRRC28-203ENST00000447360 TOGARAM2Q6ZUX3 1019 aa7.65□□□□□ -1.18
LRRC28-203ENST00000447360 MYO18BQ8IUG5 2567 aa7.65□□□□□ -1.18
LRRC28-203ENST00000447360 NAXDQ8IW45 347 aa7.65□□□□□ -1.18
LRRC28-203ENST00000447360 DAW1Q8N136 415 aa7.65□□□□□ -1.18
LRRC28-203ENST00000447360 THEM5Q8N1Q8 247 aa7.65□□□□□ -1.18
LRRC28-203ENST00000447360 CCDC33Q8N5R6 958 aa7.65□□□□□ -1.18
LRRC28-203ENST00000447360 FRMD1Q8N878 549 aa7.65□□□□□ -1.18
LRRC28-203ENST00000447360 KIAA1958Q8N8K9 716 aa7.65□□□□□ -1.18
LRRC28-203ENST00000447360 PNPLA1Q8N8W4 532 aa7.65□□□□□ -1.18
LRRC28-203ENST00000447360 IL17RCQ8NAC3 791 aa7.65□□□□□ -1.18
LRRC28-203ENST00000447360 LSM14AQ8ND56 463 aaKnown RBP7.65□□□□□ -1.18
LRRC28-203ENST00000447360 TRMT2BQ96GJ1 504 aaKnown RBP7.65□□□□□ -1.18
LRRC28-203ENST00000447360 DRC1Q96MC2 740 aa7.65□□□□□ -1.18
LRRC28-203ENST00000447360 CAMK1GQ96NX5 476 aa7.65□□□□□ -1.18
LRRC28-203ENST00000447360 ATXN2Q99700 1313 aaKnown RBP7.65□□□□□ -1.18
LRRC28-203ENST00000447360 FSCN3Q9NQT6 498 aa7.65□□□□□ -1.18
LRRC28-203ENST00000447360 BCCIPQ9P287 314 aaKnown RBP eCLIP7.65□□□□□ -1.18
LRRC28-203ENST00000447360 WNT6Q9Y6F9 365 aa7.65□□□□□ -1.18
LRRC28-203ENST00000447360 THADAQ6YHU6 1953 aa7.64□□□□□ -1.19
LRRC28-203ENST00000447360 KIF26AQ9ULI4 1882 aaPredicted RBP7.64□□□□□ -1.19
LRRC28-203ENST00000447360 HECTD1Q9ULT8 2610 aa7.64□□□□□ -1.19
LRRC28-203ENST00000447360 TRAV19A0A0A6YYK7 116 aa7.64□□□□□ -1.19
LRRC28-203ENST00000447360 MYMKA6NI61 221 aa7.64□□□□□ -1.19
LRRC28-203ENST00000447360 LACTBL1A8MY62 500 aa7.64□□□□□ -1.19
LRRC28-203ENST00000447360 BTBD18B2RXH4 712 aa7.64□□□□□ -1.19
LRRC28-203ENST00000447360 SGK1O00141 431 aa7.64□□□□□ -1.19
LRRC28-203ENST00000447360 PIRO00625 290 aa7.64□□□□□ -1.19
LRRC28-203ENST00000447360 CBFA2T3O75081 653 aa7.64□□□□□ -1.19
LRRC28-203ENST00000447360 HIP1RO75146 1068 aa7.64□□□□□ -1.19
LRRC28-203ENST00000447360 CKMP06732 381 aa7.64□□□□□ -1.19
LRRC28-203ENST00000447360 ADRB2P07550 413 aa7.64□□□□□ -1.19
LRRC28-203ENST00000447360 FDPSP14324 419 aaKnown RBP7.64□□□□□ -1.19
LRRC28-203ENST00000447360 PLA2G2AP14555 144 aa7.64□□□□□ -1.19
LRRC28-203ENST00000447360 MCM7P33993 719 aa7.64□□□□□ -1.19
LRRC28-203ENST00000447360 EIF2DP41214 584 aaKnown RBP7.64□□□□□ -1.19
LRRC28-203ENST00000447360 RPL6Q02878 288 aaKnown RBP7.64□□□□□ -1.19
LRRC28-203ENST00000447360 ORC2Q13416 577 aaPredicted RBP7.64□□□□□ -1.19
LRRC28-203ENST00000447360 ECM1Q16610 540 aa7.64□□□□□ -1.19
LRRC28-203ENST00000447360 ME3Q16798 604 aa7.64□□□□□ -1.19
LRRC28-203ENST00000447360 C9orf57Q5W0N0 161 aa7.64□□□□□ -1.19
LRRC28-203ENST00000447360 TMPRSS7Q7RTY8 843 aa7.64□□□□□ -1.19
LRRC28-203ENST00000447360 ZNF605Q86T29 641 aa7.64□□□□□ -1.19
LRRC28-203ENST00000447360 LRRTM3Q86VH5 581 aa7.64□□□□□ -1.19
LRRC28-203ENST00000447360 METTL23Q86XA0 190 aa7.64□□□□□ -1.19
LRRC28-203ENST00000447360 CD302Q8IX05 232 aa7.64□□□□□ -1.19
LRRC28-203ENST00000447360 DCP1BQ8IZD4 617 aaKnown RBP7.64□□□□□ -1.19
LRRC28-203ENST00000447360 PGBD3Q8N328 593 aa7.64□□□□□ -1.19
LRRC28-203ENST00000447360 TMEM130Q8N3G9 435 aa7.64□□□□□ -1.19
LRRC28-203ENST00000447360 ALLCQ8N6M5 410 aa7.64□□□□□ -1.19
LRRC28-203ENST00000447360 TXNDC5Q8NBS9 432 aaKnown RBP7.64□□□□□ -1.19
LRRC28-203ENST00000447360 SH3RF2Q8TEC5 729 aa7.64□□□□□ -1.19
LRRC28-203ENST00000447360 HMGB4Q8WW32 186 aa7.64□□□□□ -1.19
LRRC28-203ENST00000447360 SPIRE2Q8WWL2 714 aa7.64□□□□□ -1.19
LRRC28-203ENST00000447360 MYRFLQ96LU7 910 aa7.64□□□□□ -1.19
LRRC28-203ENST00000447360 CYP2S1Q96SQ9 504 aa7.64□□□□□ -1.19
LRRC28-203ENST00000447360 TIPINQ9BVW5 301 aa7.64□□□□□ -1.19
LRRC28-203ENST00000447360 REPIN1Q9BWE0 567 aaKnown RBP7.64□□□□□ -1.19
LRRC28-203ENST00000447360 ZDHHC5Q9C0B5 715 aa7.64□□□□□ -1.19
LRRC28-203ENST00000447360 LINC00597Q9H2U6 94 aa7.64□□□□□ -1.19
LRRC28-203ENST00000447360 FAM124BQ9H5Z6 455 aaPredicted RBP7.64□□□□□ -1.19
LRRC28-203ENST00000447360 ABI2Q9NYB9 513 aaPredicted RBP7.64□□□□□ -1.19
LRRC28-203ENST00000447360 ORC3Q9UBD5 711 aaPredicted RBP7.64□□□□□ -1.19
LRRC28-203ENST00000447360 MAGED2Q9UNF1 606 aaPredicted RBP7.64□□□□□ -1.19
LRRC28-203ENST00000447360 KIAA1024Q9UPX6 916 aa7.64□□□□□ -1.19
LRRC28-203ENST00000447360 BOLA1Q9Y3E2 137 aa7.64□□□□□ -1.19
LRRC28-203ENST00000447360 PCDHB5Q9Y5E4 795 aa7.64□□□□□ -1.19
LRRC28-203ENST00000447360 TRIP11Q15643 1979 aa7.64□□□□□ -1.19
LRRC28-203ENST00000447360 TCRBV21S2A2A0A5A6 115 aa7.63□□□□□ -1.19
LRRC28-203ENST00000447360 ANO9A1A5B4 782 aa7.63□□□□□ -1.19
LRRC28-203ENST00000447360 ANTXRLA6NF34 631 aa7.63□□□□□ -1.19
LRRC28-203ENST00000447360 CYB561D2O14569 222 aa7.63□□□□□ -1.19
LRRC28-203ENST00000447360 PPEF2O14830 753 aa7.63□□□□□ -1.19
LRRC28-203ENST00000447360 ATXN7O15265 892 aaPredicted RBP7.63□□□□□ -1.19
LRRC28-203ENST00000447360 SLC16A4O15374 487 aa7.63□□□□□ -1.19
LRRC28-203ENST00000447360 ADAM23O75077 832 aa7.63□□□□□ -1.19
LRRC28-203ENST00000447360 TADA3O75528 432 aa7.63□□□□□ -1.19
LRRC28-203ENST00000447360 C1QL1O75973 258 aa7.63□□□□□ -1.19
LRRC28-203ENST00000447360 NOL4O94818 638 aa7.63□□□□□ -1.19
LRRC28-203ENST00000447360 DKK1O94907 266 aa7.63□□□□□ -1.19
LRRC28-203ENST00000447360 KLF8O95600 359 aaPredicted RBP7.63□□□□□ -1.19
LRRC28-203ENST00000447360 PRB1P04280 392 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms