RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 PDCD2Q16342 344 aaPredicted RBP5.3□□□□□ -1.56
HMGB1P48-201ENST00000446155 SLC4A8Q2Y0W8 1093 aa5.3□□□□□ -1.56
HMGB1P48-201ENST00000446155 ZIK1Q3SY52 487 aaPredicted RBP5.3□□□□□ -1.56
HMGB1P48-201ENST00000446155 Q6YL49 198 aa5.3□□□□□ -1.56
HMGB1P48-201ENST00000446155 DBX2Q6ZNG2 339 aa5.3□□□□□ -1.56
HMGB1P48-201ENST00000446155 MMS22LQ6ZRQ5 1243 aa5.3□□□□□ -1.56
HMGB1P48-201ENST00000446155 ZNF627Q7L945 461 aa5.3□□□□□ -1.56
HMGB1P48-201ENST00000446155 TMTC2Q8N394 836 aa5.3□□□□□ -1.56
HMGB1P48-201ENST00000446155 SPATA5Q8NB90 893 aa5.3□□□□□ -1.56
HMGB1P48-201ENST00000446155 SSH3Q8TE77 659 aa5.3□□□□□ -1.56
HMGB1P48-201ENST00000446155 LINC00476Q8WZB0 136 aa5.3□□□□□ -1.56
HMGB1P48-201ENST00000446155 RIPOR3Q96MK2 946 aa5.3□□□□□ -1.56
HMGB1P48-201ENST00000446155 MOGAT1Q96PD6 335 aa5.3□□□□□ -1.56
HMGB1P48-201ENST00000446155 TTYH3Q9C0H2 523 aa5.3□□□□□ -1.56
HMGB1P48-201ENST00000446155 WDR12Q9GZL7 423 aaKnown RBP5.3□□□□□ -1.56
HMGB1P48-201ENST00000446155 ARFGAP3Q9NP61 516 aa5.3□□□□□ -1.56
HMGB1P48-201ENST00000446155 CORO2BQ9UQ03 480 aa5.3□□□□□ -1.56
HMGB1P48-201ENST00000446155 LRCH1Q9Y2L9 728 aa5.3□□□□□ -1.56
HMGB1P48-201ENST00000446155 A0A0B4J269 797 aa5.29□□□□□ -1.56
HMGB1P48-201ENST00000446155 RHPN2P1A8MT19 583 aa5.29□□□□□ -1.56
HMGB1P48-201ENST00000446155 PYCARD-AS1I3L0S3 204 aa5.29□□□□□ -1.56
HMGB1P48-201ENST00000446155 HSP90AA1P07900 732 aaKnown RBP5.29□□□□□ -1.56
HMGB1P48-201ENST00000446155 FAM163BP0C2L3 166 aa5.29□□□□□ -1.56
HMGB1P48-201ENST00000446155 XRCC6P12956 609 aaKnown RBP eCLIP5.29□□□□□ -1.56
HMGB1P48-201ENST00000446155 ITGALP20701 1170 aa5.29□□□□□ -1.56
HMGB1P48-201ENST00000446155 PPIFP30405 207 aaKnown RBP5.29□□□□□ -1.56
HMGB1P48-201ENST00000446155 HNRNPMP52272 730 aaKnown RBP eCLIP5.29□□□□□ -1.56
HMGB1P48-201ENST00000446155 LILRA4P59901 499 aa5.29□□□□□ -1.56
HMGB1P48-201ENST00000446155 BLOC1S1P78537 153 aa5.29□□□□□ -1.56
HMGB1P48-201ENST00000446155 TUBB3Q13509 450 aa5.29□□□□□ -1.56
HMGB1P48-201ENST00000446155 SIM2Q14190 667 aaPredicted RBP5.29□□□□□ -1.56
HMGB1P48-201ENST00000446155 SLC44A4Q53GD3 710 aa5.29□□□□□ -1.56
HMGB1P48-201ENST00000446155 VWA1Q6PCB0 445 aa5.29□□□□□ -1.56
HMGB1P48-201ENST00000446155 CCDC174Q6PII3 467 aa5.29□□□□□ -1.56
HMGB1P48-201ENST00000446155 ZDHHC24Q6UX98 284 aa5.29□□□□□ -1.56
HMGB1P48-201ENST00000446155 TMEM108Q6UXF1 575 aa5.29□□□□□ -1.56
HMGB1P48-201ENST00000446155 LDHAL6AQ6ZMR3 332 aa5.29□□□□□ -1.56
HMGB1P48-201ENST00000446155 KRBA2Q6ZNG9 492 aa5.29□□□□□ -1.56
HMGB1P48-201ENST00000446155 DPP9Q86TI2 863 aa5.29□□□□□ -1.56
HMGB1P48-201ENST00000446155 ULK2Q8IYT8 1036 aa5.29□□□□□ -1.56
HMGB1P48-201ENST00000446155 OR2C3Q8N628 320 aa5.29□□□□□ -1.56
HMGB1P48-201ENST00000446155 CCT6BQ92526 530 aa5.29□□□□□ -1.56
HMGB1P48-201ENST00000446155 LPIN2Q92539 896 aa5.29□□□□□ -1.56
HMGB1P48-201ENST00000446155 PAGR1Q9BTK6 254 aa5.29□□□□□ -1.56
HMGB1P48-201ENST00000446155 PTDSS2Q9BVG9 487 aa5.29□□□□□ -1.56
HMGB1P48-201ENST00000446155 AMBRA1Q9C0C7 1298 aa5.29□□□□□ -1.56
HMGB1P48-201ENST00000446155 MS4A7Q9GZW8 240 aaPredicted RBP5.29□□□□□ -1.56
HMGB1P48-201ENST00000446155 XPNPEP3Q9NQH7 507 aa5.29□□□□□ -1.56
HMGB1P48-201ENST00000446155 SAGE1Q9NXZ1 904 aa5.29□□□□□ -1.56
HMGB1P48-201ENST00000446155 SHOC2Q9UQ13 582 aa5.29□□□□□ -1.56
HMGB1P48-201ENST00000446155 PCDHGB3Q9Y5G1 929 aa5.29□□□□□ -1.56
HMGB1P48-201ENST00000446155 POLR2AP24928 1970 aaKnown RBP5.29□□□□□ -1.56
HMGB1P48-201ENST00000446155 MAST3O60307 1309 aa5.28□□□□□ -1.56
HMGB1P48-201ENST00000446155 hCG_1642624A0A1W2PR95 340 aa5.28□□□□□ -1.56
HMGB1P48-201ENST00000446155 PRRT4C9JH25 899 aa5.28□□□□□ -1.56
HMGB1P48-201ENST00000446155 MYO1CO00159 1063 aa5.28□□□□□ -1.56
HMGB1P48-201ENST00000446155 KPNA5O15131 536 aa5.28□□□□□ -1.56
HMGB1P48-201ENST00000446155 IL18RAPO95256 599 aa5.28□□□□□ -1.56
HMGB1P48-201ENST00000446155 ADH4P08319 380 aa5.28□□□□□ -1.56
HMGB1P48-201ENST00000446155 PPP3CBP16298 524 aa5.28□□□□□ -1.56
HMGB1P48-201ENST00000446155 MCM7P33993 719 aa5.28□□□□□ -1.56
HMGB1P48-201ENST00000446155 CHKAP35790 457 aa5.28□□□□□ -1.56
HMGB1P48-201ENST00000446155 ACVRL1P37023 503 aa5.28□□□□□ -1.56
HMGB1P48-201ENST00000446155 GRK6P43250 576 aa5.28□□□□□ -1.56
HMGB1P48-201ENST00000446155 ZXDAP98168 799 aa5.28□□□□□ -1.56
HMGB1P48-201ENST00000446155 ABHD18Q0P651 414 aa5.28□□□□□ -1.56
HMGB1P48-201ENST00000446155 PTPAQ15257 358 aa5.28□□□□□ -1.56
HMGB1P48-201ENST00000446155 SF3B3Q15393 1217 aaKnown RBP5.28□□□□□ -1.56
HMGB1P48-201ENST00000446155 PREPLQ4J6C6 727 aaPredicted RBP5.28□□□□□ -1.56
HMGB1P48-201ENST00000446155 DGKKQ5KSL6 1271 aa5.28□□□□□ -1.56
HMGB1P48-201ENST00000446155 RBM20Q5T481 1227 aaKnown RBP5.28□□□□□ -1.56
HMGB1P48-201ENST00000446155 VPS53Q5VIR6 699 aa5.28□□□□□ -1.56
HMGB1P48-201ENST00000446155 KIAA0895LQ68EN5 471 aa5.28□□□□□ -1.56
HMGB1P48-201ENST00000446155 ZNF280BQ86YH2 543 aa5.28□□□□□ -1.56
HMGB1P48-201ENST00000446155 AMER2Q8N7J2 671 aa5.28□□□□□ -1.56
HMGB1P48-201ENST00000446155 SLC30A5Q8TAD4 765 aa5.28□□□□□ -1.56
HMGB1P48-201ENST00000446155 SPSB4Q96A44 273 aa5.28□□□□□ -1.56
HMGB1P48-201ENST00000446155 COQ10AQ96MF6 247 aa5.28□□□□□ -1.56
HMGB1P48-201ENST00000446155 COLEC11Q9BWP8 271 aa5.28□□□□□ -1.56
HMGB1P48-201ENST00000446155 BRIP1Q9BX63 1249 aa5.28□□□□□ -1.56
HMGB1P48-201ENST00000446155 CHST8Q9H2A9 424 aa5.28□□□□□ -1.56
HMGB1P48-201ENST00000446155 TBCCD1Q9NVR7 557 aa5.28□□□□□ -1.56
HMGB1P48-201ENST00000446155 KCTD5Q9NXV2 234 aa5.28□□□□□ -1.56
HMGB1P48-201ENST00000446155 PGAP2Q9UHJ9 254 aa5.28□□□□□ -1.56
HMGB1P48-201ENST00000446155 SSX2IPQ9Y2D8 614 aa5.28□□□□□ -1.56
HMGB1P48-201ENST00000446155 A0A1W2PPC4 97 aa5.27□□□□□ -1.57
HMGB1P48-201ENST00000446155 WDR27A2RRH5 827 aa5.27□□□□□ -1.57
HMGB1P48-201ENST00000446155 F5H697 171 aa5.27□□□□□ -1.57
HMGB1P48-201ENST00000446155 TLR5O60602 858 aa5.27□□□□□ -1.57
HMGB1P48-201ENST00000446155 FZD7O75084 574 aa5.27□□□□□ -1.57
HMGB1P48-201ENST00000446155 MT-ND5P03915 603 aa5.27□□□□□ -1.57
HMGB1P48-201ENST00000446155 TXNP10599 105 aaKnown RBP5.27□□□□□ -1.57
HMGB1P48-201ENST00000446155 ITGAMP11215 1152 aa5.27□□□□□ -1.57
HMGB1P48-201ENST00000446155 CD6P30203 668 aa5.27□□□□□ -1.57
HMGB1P48-201ENST00000446155 LRPAP1P30533 357 aa5.27□□□□□ -1.57
HMGB1P48-201ENST00000446155 PPM1AP35813 382 aa5.27□□□□□ -1.57
HMGB1P48-201ENST00000446155 IL6STP40189 918 aaPredicted RBP5.27□□□□□ -1.57
HMGB1P48-201ENST00000446155 PXNP49023 591 aaPredicted RBP5.27□□□□□ -1.57
HMGB1P48-201ENST00000446155 GEMIN4P57678 1058 aaKnown RBP5.27□□□□□ -1.57
HMGB1P48-201ENST00000446155 TNFAIP2Q03169 654 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms