RNA–Protein interactions for RNA: ENST00000445866.6

SGCE-206, Transcript of sarcoglycan epsilon, humanhuman

TSL 5 BASIC

Gene SGCE, Length 1,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-206ENST00000445866 SCN4BQ8IWT1 228 aa18.43■□□□□ 0.54
SGCE-206ENST00000445866 SMARCD1Q96GM5 515 aa18.43■□□□□ 0.54
SGCE-206ENST00000445866 SYT11Q9BT88 431 aa18.43■□□□□ 0.54
SGCE-206ENST00000445866 LHX5Q9H2C1 402 aa18.43■□□□□ 0.54
SGCE-206ENST00000445866 KRT82Q9NSB4 513 aa18.43■□□□□ 0.54
SGCE-206ENST00000445866 MAFFQ9ULX9 164 aa18.43■□□□□ 0.54
SGCE-206ENST00000445866 SSU72P8A0A1W2PR75 194 aa18.42■□□□□ 0.54
SGCE-206ENST00000445866 PRRG1O14668 218 aa18.42■□□□□ 0.54
SGCE-206ENST00000445866 AKR1B10O60218 316 aa18.42■□□□□ 0.54
SGCE-206ENST00000445866 SEC24AO95486 1093 aa18.42■□□□□ 0.54
SGCE-206ENST00000445866 GLUD1P00367 558 aa18.42■□□□□ 0.54
SGCE-206ENST00000445866 NRIP1P48552 1158 aa18.42■□□□□ 0.54
SGCE-206ENST00000445866 PDE4CQ08493 712 aa18.42■□□□□ 0.54
SGCE-206ENST00000445866 MAPK8IP2Q13387 824 aaPredicted RBP18.42■□□□□ 0.54
SGCE-206ENST00000445866 HABP4Q5JVS0 413 aaKnown RBP18.42■□□□□ 0.54
SGCE-206ENST00000445866 VSTM1Q6UX27 236 aa18.42■□□□□ 0.54
SGCE-206ENST00000445866 ADGRD2Q7Z7M1 963 aa18.42■□□□□ 0.54
SGCE-206ENST00000445866 TMEM35BQ8NCS4 154 aa18.42■□□□□ 0.54
SGCE-206ENST00000445866 CPA5Q8WXQ8 436 aa18.42■□□□□ 0.54
SGCE-206ENST00000445866 PPP2R3CQ969Q6 453 aa18.42■□□□□ 0.54
SGCE-206ENST00000445866 KCNK16Q96T55 309 aa18.42■□□□□ 0.54
SGCE-206ENST00000445866 SEPT5Q99719 369 aaPredicted RBP18.42■□□□□ 0.54
SGCE-206ENST00000445866 SMOQ99835 787 aa18.42■□□□□ 0.54
SGCE-206ENST00000445866 CRISPLD1Q9H336 500 aa18.42■□□□□ 0.54
SGCE-206ENST00000445866 TDRD15B5MCY1 1934 aaKnown RBP18.42■□□□□ 0.54
SGCE-206ENST00000445866 FAM170AA1A519 330 aa18.41■□□□□ 0.54
SGCE-206ENST00000445866 DDX3XO00571 662 aaKnown RBP eCLIP18.41■□□□□ 0.542e-26■■■□□ 14.6
SGCE-206ENST00000445866 BEST1O76090 585 aa18.41■□□□□ 0.54
SGCE-206ENST00000445866 HAPLN1P10915 354 aaPredicted RBP18.41■□□□□ 0.54
SGCE-206ENST00000445866 NPR3P17342 541 aa18.41■□□□□ 0.54
SGCE-206ENST00000445866 IGFBP4P22692 258 aa18.41■□□□□ 0.54
SGCE-206ENST00000445866 GPD2P43304 727 aa18.41■□□□□ 0.54
SGCE-206ENST00000445866 MAGEA11P43364 429 aa18.41■□□□□ 0.54
SGCE-206ENST00000445866 CLCN4P51793 760 aa18.41■□□□□ 0.54
SGCE-206ENST00000445866 CACNA2D1P54289 1103 aa18.41■□□□□ 0.54
SGCE-206ENST00000445866 BCAT1P54687 386 aa18.41■□□□□ 0.54
SGCE-206ENST00000445866 BST2Q10589 180 aaKnown RBP18.41■□□□□ 0.54
SGCE-206ENST00000445866 DDR2Q16832 855 aa18.41■□□□□ 0.54
SGCE-206ENST00000445866 PKDCCQ504Y2 493 aa18.41■□□□□ 0.54
SGCE-206ENST00000445866 TRIM72Q6ZMU5 477 aa18.41■□□□□ 0.54
SGCE-206ENST00000445866 WDTC1Q8N5D0 677 aa18.41■□□□□ 0.54
SGCE-206ENST00000445866 TTC9BQ8N6N2 239 aa18.41■□□□□ 0.54
SGCE-206ENST00000445866 KREMEN2Q8NCW0 462 aa18.41■□□□□ 0.54
SGCE-206ENST00000445866 SECISBP2LQ93073 1101 aaKnown RBP18.41■□□□□ 0.54
SGCE-206ENST00000445866 IGFLR1Q9H665 355 aa18.41■□□□□ 0.54
SGCE-206ENST00000445866 LMCD1Q9NZU5 365 aa18.41■□□□□ 0.54
SGCE-206ENST00000445866 F8VP50 259 aa18.41■□□□□ 0.54
SGCE-206ENST00000445866 NRDCO43847 1150 aa18.41■□□□□ 0.54
SGCE-206ENST00000445866 SOAT2O75908 522 aa18.41■□□□□ 0.54
SGCE-206ENST00000445866 LSM8O95777 96 aaKnown RBP18.41■□□□□ 0.54
SGCE-206ENST00000445866 FECHP22830 423 aa18.41■□□□□ 0.54
SGCE-206ENST00000445866 CLEC16AQ2KHT3 1053 aa18.41■□□□□ 0.54
SGCE-206ENST00000445866 NAA35Q5VZE5 725 aa18.41■□□□□ 0.54
SGCE-206ENST00000445866 TCEAL8Q8IYN2 117 aa18.41■□□□□ 0.54
SGCE-206ENST00000445866 CCDC170Q8IYT3 715 aa18.41■□□□□ 0.54
SGCE-206ENST00000445866 SLC30A5Q8TAD4 765 aa18.41■□□□□ 0.54
SGCE-206ENST00000445866 SLC35F5Q8WV83 523 aa18.41■□□□□ 0.54
SGCE-206ENST00000445866 DMAP1Q9NPF5 467 aaPredicted RBP18.41■□□□□ 0.54
SGCE-206ENST00000445866 TRIOBPQ9H2D6 2365 aa18.4■□□□□ 0.54
SGCE-206ENST00000445866 A0A087X0T9 212 aa18.4■□□□□ 0.54
SGCE-206ENST00000445866 SOWAHDA6NJG2 315 aa18.4■□□□□ 0.54
SGCE-206ENST00000445866 TMCO5BA8MYB1 307 aa18.4■□□□□ 0.54
SGCE-206ENST00000445866 TULP2O00295 520 aa18.4■□□□□ 0.54
SGCE-206ENST00000445866 CYP1A1P04798 512 aaPredicted RBP18.4■□□□□ 0.54
SGCE-206ENST00000445866 FAM228BP0C875 321 aa18.4■□□□□ 0.54
SGCE-206ENST00000445866 SETSIPP0DME0 302 aa18.4■□□□□ 0.54
SGCE-206ENST00000445866 ANXA13P27216 316 aa18.4■□□□□ 0.54
SGCE-206ENST00000445866 ALDH1A3P47895 512 aa18.4■□□□□ 0.54
SGCE-206ENST00000445866 RPL10AP62906 217 aaKnown RBP18.4■□□□□ 0.54
SGCE-206ENST00000445866 ASTE1Q2TB18 679 aaPredicted RBP18.4■□□□□ 0.54
SGCE-206ENST00000445866 CLEC20AQ6ZU45 233 aa18.4■□□□□ 0.54
SGCE-206ENST00000445866 CCDC112Q8NEF3 446 aa18.4■□□□□ 0.54
SGCE-206ENST00000445866 SLC22A17Q8WUG5 538 aa18.4■□□□□ 0.54
SGCE-206ENST00000445866 ZNF830Q96NB3 372 aaPredicted RBP18.4■□□□□ 0.54
SGCE-206ENST00000445866 NOX5Q96PH1 765 aa18.4■□□□□ 0.54
SGCE-206ENST00000445866 NSUN3Q9H649 340 aaKnown RBP18.4■□□□□ 0.54
SGCE-206ENST00000445866 CSNK1G1Q9HCP0 422 aa18.4■□□□□ 0.54
SGCE-206ENST00000445866 ST7Q9NRC1 585 aa18.4■□□□□ 0.54
SGCE-206ENST00000445866 TMEM30AQ9NV96 361 aa18.4■□□□□ 0.54
SGCE-206ENST00000445866 HSFX1Q9UBD0 423 aa18.4■□□□□ 0.54
SGCE-206ENST00000445866 EPN1Q9Y6I3 576 aaPredicted RBP18.4■□□□□ 0.54
SGCE-206ENST00000445866 XPO1O14980 1071 aaKnown RBP18.39■□□□□ 0.53
SGCE-206ENST00000445866 C1RP00736 705 aa18.39■□□□□ 0.53
SGCE-206ENST00000445866 EPCAMP16422 314 aa18.39■□□□□ 0.53
SGCE-206ENST00000445866 GPR15P49685 360 aa18.39■□□□□ 0.53
SGCE-206ENST00000445866 RGS7P49802 495 aa18.39■□□□□ 0.53
SGCE-206ENST00000445866 GFPT1Q06210 699 aaPredicted RBP18.39■□□□□ 0.53
SGCE-206ENST00000445866 DUSP6Q16828 381 aa18.39■□□□□ 0.53
SGCE-206ENST00000445866 TCEAL5Q5H9L2 206 aa18.39■□□□□ 0.53
SGCE-206ENST00000445866 CCDC122Q5T0U0 273 aa18.39■□□□□ 0.53
SGCE-206ENST00000445866 SDHAF4Q5VUM1 108 aa18.39■□□□□ 0.53
SGCE-206ENST00000445866 PMF1Q6P1K2 205 aa18.39■□□□□ 0.53
SGCE-206ENST00000445866 LLGL2Q6P1M3 1020 aa18.39■□□□□ 0.53
SGCE-206ENST00000445866 CCDC149Q6ZUS6 474 aa18.39■□□□□ 0.53
SGCE-206ENST00000445866 TMEM139Q8IV31 216 aa18.39■□□□□ 0.53
SGCE-206ENST00000445866 C1orf131Q8NDD1 294 aaKnown RBP18.39■□□□□ 0.53
SGCE-206ENST00000445866 C8orf48Q96LL4 319 aa18.39■□□□□ 0.53
SGCE-206ENST00000445866 UBXN6Q9BZV1 441 aa18.39■□□□□ 0.53
SGCE-206ENST00000445866 PLEKHA4Q9H4M7 779 aa18.39■□□□□ 0.53
SGCE-206ENST00000445866 PDCD11Q14690 1871 aaKnown RBP18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms