RNA–Protein interactions for RNA: ENST00000445369.2

CLDN9-201, Transcript of claudin 9, humanhuman

APPRIS P1 BASIC

Gene CLDN9, Length 2,050 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN9-201ENST00000445369 TMEM132DQ14C87 1099 aa18.72■□□□□ 0.59
CLDN9-201ENST00000445369 ACAP1Q15027 740 aa18.72■□□□□ 0.59
CLDN9-201ENST00000445369 KYAT1Q16773 422 aa18.72■□□□□ 0.59
CLDN9-201ENST00000445369 ZNF792Q3KQV3 632 aa18.72■□□□□ 0.59
CLDN9-201ENST00000445369 ARHGEF18Q6ZSZ5 1173 aa18.72■□□□□ 0.59
CLDN9-201ENST00000445369 CENPUQ71F23 418 aa18.72■□□□□ 0.59
CLDN9-201ENST00000445369 PCGF5Q86SE9 256 aa18.72■□□□□ 0.59
CLDN9-201ENST00000445369 TAX1BP1Q86VP1 789 aa18.72■□□□□ 0.59
CLDN9-201ENST00000445369 CMASQ8NFW8 434 aaPredicted RBP18.72■□□□□ 0.59
CLDN9-201ENST00000445369 PPTC7Q8NI37 304 aa18.72■□□□□ 0.59
CLDN9-201ENST00000445369 HPDLQ96IR7 371 aa18.72■□□□□ 0.59
CLDN9-201ENST00000445369 PHACTR1Q9C0D0 580 aa18.72■□□□□ 0.59
CLDN9-201ENST00000445369 FGFR1OP2Q9NVK5 253 aa18.72■□□□□ 0.59
CLDN9-201ENST00000445369 RASA4BC9J798 803 aa18.71■□□□□ 0.59
CLDN9-201ENST00000445369 RASA4O43374 803 aa18.71■□□□□ 0.59
CLDN9-201ENST00000445369 MIPP30301 263 aa18.71■□□□□ 0.59
CLDN9-201ENST00000445369 NR1H3Q13133 447 aa18.71■□□□□ 0.59
CLDN9-201ENST00000445369 TRABD2AQ86V40 505 aa18.71■□□□□ 0.59
CLDN9-201ENST00000445369 SUGP1Q8IWZ8 645 aaKnown RBP18.71■□□□□ 0.59
CLDN9-201ENST00000445369 STAU1O95793 577 aaKnown RBP18.7■□□□□ 0.58
CLDN9-201ENST00000445369 ZNF286BP0CG31 522 aa18.7■□□□□ 0.58
CLDN9-201ENST00000445369 CYP2C8P10632 490 aa18.7■□□□□ 0.58
CLDN9-201ENST00000445369 SF3A3Q12874 501 aaKnown RBP eCLIP18.7■□□□□ 0.58
CLDN9-201ENST00000445369 MAP1SQ66K74 1059 aaPredicted RBP18.7■□□□□ 0.58
CLDN9-201ENST00000445369 PPP1R21Q6ZMI0 780 aa18.7■□□□□ 0.58
CLDN9-201ENST00000445369 ZBED8Q8IZ13 594 aa18.7■□□□□ 0.58
CLDN9-201ENST00000445369 GDAP1Q8TB36 358 aa18.7■□□□□ 0.58
CLDN9-201ENST00000445369 EMID1Q96A84 441 aaPredicted RBP18.7■□□□□ 0.58
CLDN9-201ENST00000445369 SLC40A1Q9NP59 571 aa18.7■□□□□ 0.58
CLDN9-201ENST00000445369 VTA1Q9NP79 307 aa18.7■□□□□ 0.58
CLDN9-201ENST00000445369 NKIRAS1Q9NYS0 192 aa18.7■□□□□ 0.58
CLDN9-201ENST00000445369 PCSK1NQ9UHG2 260 aa18.7■□□□□ 0.58
CLDN9-201ENST00000445369 ITGA11Q9UKX5 1188 aa18.7■□□□□ 0.58
CLDN9-201ENST00000445369 BARX2Q9UMQ3 279 aaPredicted RBP18.7■□□□□ 0.58
CLDN9-201ENST00000445369 AGAP1Q9UPQ3 857 aa18.7■□□□□ 0.58
CLDN9-201ENST00000445369 C2CD2Q9Y426 696 aa18.7■□□□□ 0.58
CLDN9-201ENST00000445369 TRIP11Q15643 1979 aa18.7■□□□□ 0.58
CLDN9-201ENST00000445369 RBM47A0AV96 593 aaKnown RBP18.7■□□□□ 0.58
CLDN9-201ENST00000445369 TSPAN1O60635 241 aa18.7■□□□□ 0.58
CLDN9-201ENST00000445369 DNAJC8O75937 253 aaPredicted RBP18.7■□□□□ 0.58
CLDN9-201ENST00000445369 TRUB2O95900 331 aaKnown RBP18.7■□□□□ 0.58
CLDN9-201ENST00000445369 CTCFP49711 727 aaPredicted RBP18.7■□□□□ 0.58
CLDN9-201ENST00000445369 PDIA2Q13087 525 aaKnown RBP18.7■□□□□ 0.58
CLDN9-201ENST00000445369 TAF5Q15542 800 aa18.7■□□□□ 0.58
CLDN9-201ENST00000445369 HP1BP3Q5SSJ5 553 aaPredicted RBP18.7■□□□□ 0.58
CLDN9-201ENST00000445369 NUGGCQ68CJ6 796 aa18.7■□□□□ 0.58
CLDN9-201ENST00000445369 TRPM8Q7Z2W7 1104 aa18.7■□□□□ 0.58
CLDN9-201ENST00000445369 PPIL6Q8IXY8 311 aa18.7■□□□□ 0.58
CLDN9-201ENST00000445369 AFG1LQ8WV93 481 aa18.7■□□□□ 0.58
CLDN9-201ENST00000445369 CPT1BQ92523 772 aa18.7■□□□□ 0.58
CLDN9-201ENST00000445369 MAGEB18Q96M61 343 aa18.7■□□□□ 0.58
CLDN9-201ENST00000445369 ADPGKQ9BRR6 497 aa18.7■□□□□ 0.58
CLDN9-201ENST00000445369 C16orf70Q9BSU1 422 aa18.7■□□□□ 0.58
CLDN9-201ENST00000445369 SYT17Q9BSW7 474 aa18.7■□□□□ 0.58
CLDN9-201ENST00000445369 FAM124BQ9H5Z6 455 aaPredicted RBP18.7■□□□□ 0.58
CLDN9-201ENST00000445369 C10orf88Q9H8K7 445 aa18.7■□□□□ 0.58
CLDN9-201ENST00000445369 UBN1Q9NPG3 1134 aa18.7■□□□□ 0.58
CLDN9-201ENST00000445369 USP18Q9UMW8 372 aa18.7■□□□□ 0.58
CLDN9-201ENST00000445369 SLC12A4Q9UP95 1085 aa18.7■□□□□ 0.58
CLDN9-201ENST00000445369 USP15Q9Y4E8 981 aaPredicted RBP18.7■□□□□ 0.58
CLDN9-201ENST00000445369 APOC4-APOC2K7ER74 178 aa18.69■□□□□ 0.58
CLDN9-201ENST00000445369 ATP2C2O75185 946 aa18.69■□□□□ 0.58
CLDN9-201ENST00000445369 RNF8O76064 485 aa18.69■□□□□ 0.58
CLDN9-201ENST00000445369 APOC2P02655 101 aa18.69■□□□□ 0.58
CLDN9-201ENST00000445369 GSTA1P08263 222 aa18.69■□□□□ 0.58
CLDN9-201ENST00000445369 YBX3P16989 372 aaKnown RBP eCLIP18.69■□□□□ 0.58
CLDN9-201ENST00000445369 CYP3A5P20815 502 aa18.69■□□□□ 0.58
CLDN9-201ENST00000445369 STX2P32856 288 aa18.69■□□□□ 0.58
CLDN9-201ENST00000445369 PCK1P35558 622 aa18.69■□□□□ 0.58
CLDN9-201ENST00000445369 MKRN3Q13064 507 aaKnown RBP18.69■□□□□ 0.58
CLDN9-201ENST00000445369 SNAPC2Q13487 334 aa18.69■□□□□ 0.58
CLDN9-201ENST00000445369 HIF1AQ16665 826 aa18.69■□□□□ 0.58
CLDN9-201ENST00000445369 FAM102AQ5T9C2 384 aaPredicted RBP18.69■□□□□ 0.58
CLDN9-201ENST00000445369 C9orf131Q5VYM1 1079 aa18.69■□□□□ 0.58
CLDN9-201ENST00000445369 MTHFD1LQ6UB35 978 aa18.69■□□□□ 0.58
CLDN9-201ENST00000445369 NAT8LQ8N9F0 302 aa18.69■□□□□ 0.58
CLDN9-201ENST00000445369 KCTD6Q8NC69 237 aa18.69■□□□□ 0.58
CLDN9-201ENST00000445369 SGSM3Q96HU1 749 aa18.69■□□□□ 0.58
CLDN9-201ENST00000445369 HEXIM2Q96MH2 286 aaKnown RBP18.69■□□□□ 0.58
CLDN9-201ENST00000445369 PEBP4Q96S96 227 aa18.69■□□□□ 0.58
CLDN9-201ENST00000445369 VPS37BQ9H9H4 285 aa18.69■□□□□ 0.58
CLDN9-201ENST00000445369 PPCSQ9HAB8 311 aa18.69■□□□□ 0.58
CLDN9-201ENST00000445369 FAM47DPA6NHR8 397 aa18.69■□□□□ 0.58
CLDN9-201ENST00000445369 RPL22P35268 128 aaKnown RBP18.69■□□□□ 0.58
CLDN9-201ENST00000445369 ZNF143P52747 638 aaPredicted RBP18.69■□□□□ 0.58
CLDN9-201ENST00000445369 NDST1P52848 882 aa18.69■□□□□ 0.58
CLDN9-201ENST00000445369 XRCC4Q13426 336 aa18.69■□□□□ 0.58
CLDN9-201ENST00000445369 RASA2Q15283 850 aa18.69■□□□□ 0.58
CLDN9-201ENST00000445369 ANKRD22Q5VYY1 191 aa18.69■□□□□ 0.58
CLDN9-201ENST00000445369 USP50Q70EL3 339 aaPredicted RBP18.69■□□□□ 0.58
CLDN9-201ENST00000445369 RFX6Q8HWS3 928 aa18.69■□□□□ 0.58
CLDN9-201ENST00000445369 UBA3Q8TBC4 463 aa18.69■□□□□ 0.58
CLDN9-201ENST00000445369 GTF3C2Q8WUA4 911 aaPredicted RBP18.69■□□□□ 0.58
CLDN9-201ENST00000445369 TGS1Q96RS0 853 aaKnown RBP18.69■□□□□ 0.58
CLDN9-201ENST00000445369 KATNBL1Q9H079 304 aa18.69■□□□□ 0.58
CLDN9-201ENST00000445369 ASNSD1Q9NWL6 643 aa18.69■□□□□ 0.58
CLDN9-201ENST00000445369 DPP3Q9NY33 737 aa18.69■□□□□ 0.58
CLDN9-201ENST00000445369 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.69■□□□□ 0.58
CLDN9-201ENST00000445369 PNMA3Q9UL41 463 aa18.69■□□□□ 0.58
CLDN9-201ENST00000445369 KAT6AQ92794 2004 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms