RNA–Protein interactions for RNA: ENST00000444951.5

LIME1-202, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3

Gene LIME1, Length 451 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-202ENST00000444951 KLRC2P26717 231 aa18.29■□□□□ 0.52
LIME1-202ENST00000444951 CDC25BP30305 580 aa18.29■□□□□ 0.52
LIME1-202ENST00000444951 SOX5P35711 763 aa18.29■□□□□ 0.52
LIME1-202ENST00000444951 MTHFRP42898 656 aa18.29■□□□□ 0.52
LIME1-202ENST00000444951 CREMQ03060 361 aa18.29■□□□□ 0.52
LIME1-202ENST00000444951 TCF15Q12870 199 aa18.29■□□□□ 0.52
LIME1-202ENST00000444951 TRIM14Q14142 442 aa18.29■□□□□ 0.52
LIME1-202ENST00000444951 FIGNQ5HY92 759 aa18.29■□□□□ 0.52
LIME1-202ENST00000444951 INTS6LQ5JSJ4 861 aaKnown RBP18.29■□□□□ 0.52
LIME1-202ENST00000444951 LRRTM3Q86VH5 581 aa18.29■□□□□ 0.52
LIME1-202ENST00000444951 SUGP1Q8IWZ8 645 aaKnown RBP18.29■□□□□ 0.52
LIME1-202ENST00000444951 C12orf29Q8N999 325 aa18.29■□□□□ 0.52
LIME1-202ENST00000444951 B3GALNT2Q8NCR0 500 aa18.29■□□□□ 0.52
LIME1-202ENST00000444951 NECTIN4Q96NY8 510 aa18.29■□□□□ 0.52
LIME1-202ENST00000444951 MED10Q9BTT4 135 aa18.29■□□□□ 0.52
LIME1-202ENST00000444951 EMILIN2Q9BXX0 1053 aa18.29■□□□□ 0.52
LIME1-202ENST00000444951 ZCWPW1Q9H0M4 648 aa18.29■□□□□ 0.52
LIME1-202ENST00000444951 CRTAC1Q9NQ79 661 aa18.29■□□□□ 0.52
LIME1-202ENST00000444951 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.29■□□□□ 0.52
LIME1-202ENST00000444951 TMLHEQ9NVH6 421 aa18.29■□□□□ 0.52
LIME1-202ENST00000444951 DZANK1Q9NVP4 752 aa18.29■□□□□ 0.52
LIME1-202ENST00000444951 NR2E1Q9Y466 385 aa18.29■□□□□ 0.52
LIME1-202ENST00000444951 MYO15AQ9UKN7 3530 aa18.29■□□□□ 0.52
LIME1-202ENST00000444951 DMDP11532 3685 aa18.28■□□□□ 0.52
LIME1-202ENST00000444951 A0A1W2PQJ5 194 aa18.28■□□□□ 0.52
LIME1-202ENST00000444951 TBC1D4O60343 1298 aa18.28■□□□□ 0.52
LIME1-202ENST00000444951 CCDC130P13994 396 aa18.28■□□□□ 0.52
LIME1-202ENST00000444951 BRD2P25440 801 aaKnown RBP18.28■□□□□ 0.52
LIME1-202ENST00000444951 CLCN1P35523 988 aa18.28■□□□□ 0.52
LIME1-202ENST00000444951 KRT9P35527 623 aa18.28■□□□□ 0.52
LIME1-202ENST00000444951 CLCN4P51793 760 aa18.28■□□□□ 0.52
LIME1-202ENST00000444951 ADKP55263 362 aaKnown RBP18.28■□□□□ 0.52
LIME1-202ENST00000444951 CYP27A1Q02318 531 aa18.28■□□□□ 0.52
LIME1-202ENST00000444951 SFMBT2Q5VUG0 894 aa18.28■□□□□ 0.52
LIME1-202ENST00000444951 FAM71AQ8IYT1 594 aa18.28■□□□□ 0.52
LIME1-202ENST00000444951 DCP1BQ8IZD4 617 aaKnown RBP18.28■□□□□ 0.52
LIME1-202ENST00000444951 IQCDQ96DY2 449 aa18.28■□□□□ 0.52
LIME1-202ENST00000444951 RIPOR3Q96MK2 946 aa18.28■□□□□ 0.52
LIME1-202ENST00000444951 EDEM3Q9BZQ6 932 aa18.28■□□□□ 0.52
LIME1-202ENST00000444951 THAP12O43422 761 aa18.27■□□□□ 0.52
LIME1-202ENST00000444951 SPATA31D3P0C874 917 aa18.27■□□□□ 0.52
LIME1-202ENST00000444951 ADORA2BP29275 332 aa18.27■□□□□ 0.52
LIME1-202ENST00000444951 GNA15P30679 374 aa18.27■□□□□ 0.52
LIME1-202ENST00000444951 ZNF132P52740 706 aa18.27■□□□□ 0.52
LIME1-202ENST00000444951 ZBED6P86452 979 aa18.27■□□□□ 0.52
LIME1-202ENST00000444951 ROR1Q01973 937 aa18.27■□□□□ 0.52
LIME1-202ENST00000444951 TBX2Q13207 712 aaPredicted RBP18.27■□□□□ 0.52
LIME1-202ENST00000444951 ASIC2Q16515 512 aa18.27■□□□□ 0.52
LIME1-202ENST00000444951 RNF19BQ6ZMZ0 732 aa18.27■□□□□ 0.52
LIME1-202ENST00000444951 SPATA31D4Q6ZUB0 917 aa18.27■□□□□ 0.52
LIME1-202ENST00000444951 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.27■□□□□ 0.52
LIME1-202ENST00000444951 SLC47A2Q86VL8 602 aa18.27■□□□□ 0.52
LIME1-202ENST00000444951 CRYBG2Q8N1P7 616 aa18.27■□□□□ 0.52
LIME1-202ENST00000444951 MYLPFQ96A32 169 aa18.27■□□□□ 0.52
LIME1-202ENST00000444951 OXCT2Q9BYC2 517 aaPredicted RBP18.27■□□□□ 0.52
LIME1-202ENST00000444951 RHOBTB2Q9BYZ6 727 aa18.27■□□□□ 0.52
LIME1-202ENST00000444951 FAM124BQ9H5Z6 455 aaPredicted RBP18.27■□□□□ 0.52
LIME1-202ENST00000444951 RXFP1Q9HBX9 757 aa18.27■□□□□ 0.52
LIME1-202ENST00000444951 ABI2Q9NYB9 513 aaPredicted RBP18.27■□□□□ 0.52
LIME1-202ENST00000444951 FNIP2Q9P278 1114 aa18.27■□□□□ 0.52
LIME1-202ENST00000444951 CNTN6Q9UQ52 1028 aa18.27■□□□□ 0.52
LIME1-202ENST00000444951 WDR27A2RRH5 827 aa18.26■□□□□ 0.51
LIME1-202ENST00000444951 AKR1B15C9JRZ8 316 aaPredicted RBP18.26■□□□□ 0.51
LIME1-202ENST00000444951 CLDN5O00501 218 aa18.26■□□□□ 0.51
LIME1-202ENST00000444951 MFAP3LO75121 409 aa18.26■□□□□ 0.51
LIME1-202ENST00000444951 ADH1AP07327 375 aa18.26■□□□□ 0.51
LIME1-202ENST00000444951 PAEPP09466 180 aa18.26■□□□□ 0.51
LIME1-202ENST00000444951 PTK2Q05397 1052 aa18.26■□□□□ 0.51
LIME1-202ENST00000444951 SGO2Q562F6 1265 aa18.26■□□□□ 0.51
LIME1-202ENST00000444951 TAF3Q5VWG9 929 aa18.26■□□□□ 0.51
LIME1-202ENST00000444951 SLC8B1Q6J4K2 584 aa18.26■□□□□ 0.51
LIME1-202ENST00000444951 SPATA2LQ8IUW3 424 aaPredicted RBP18.26■□□□□ 0.51
LIME1-202ENST00000444951 TDRD5Q8NAT2 981 aaKnown RBP18.26■□□□□ 0.51
LIME1-202ENST00000444951 MYCBPAPQ8TBZ2 947 aa18.26■□□□□ 0.51
LIME1-202ENST00000444951 SLC2A14Q8TDB8 520 aa18.26■□□□□ 0.51
LIME1-202ENST00000444951 TFAP2BQ92481 460 aa18.26■□□□□ 0.51
LIME1-202ENST00000444951 CYFIP2Q96F07 1278 aa18.26■□□□□ 0.51
LIME1-202ENST00000444951 B3GNT5Q9BYG0 378 aa18.26■□□□□ 0.51
LIME1-202ENST00000444951 LIMD1Q9UGP4 676 aa18.26■□□□□ 0.51
LIME1-202ENST00000444951 SORCS3Q9UPU3 1222 aa18.26■□□□□ 0.51
LIME1-202ENST00000444951 FAM170AA1A519 330 aa18.25■□□□□ 0.51
LIME1-202ENST00000444951 VDRP11473 427 aa18.25■□□□□ 0.51
LIME1-202ENST00000444951 SKILP12757 684 aa18.25■□□□□ 0.51
LIME1-202ENST00000444951 FERP16591 822 aa18.25■□□□□ 0.51
LIME1-202ENST00000444951 AVPR2P30518 371 aa18.25■□□□□ 0.51
LIME1-202ENST00000444951 PDE6CP51160 858 aa18.25■□□□□ 0.51
LIME1-202ENST00000444951 GPR17Q13304 367 aa18.25■□□□□ 0.51
LIME1-202ENST00000444951 MAPRE1Q15691 268 aaKnown RBP18.25■□□□□ 0.51
LIME1-202ENST00000444951 TSR1Q2NL82 804 aaKnown RBP18.25■□□□□ 0.51
LIME1-202ENST00000444951 GOLGA7BQ2TAP0 167 aa18.25■□□□□ 0.51
LIME1-202ENST00000444951 ATAT1Q5SQI0 421 aa18.25■□□□□ 0.51
LIME1-202ENST00000444951 PPP1R26Q5T8A7 1209 aaPredicted RBP18.25■□□□□ 0.51
LIME1-202ENST00000444951 E4F1Q66K89 784 aaPredicted RBP18.25■□□□□ 0.51
LIME1-202ENST00000444951 FAM171BQ6P995 826 aa18.25■□□□□ 0.51
LIME1-202ENST00000444951 GPR65Q8IYL9 337 aa18.25■□□□□ 0.51
LIME1-202ENST00000444951 ATAD1Q8NBU5 361 aa18.25■□□□□ 0.51
LIME1-202ENST00000444951 PCED1BQ96HM7 432 aa18.25■□□□□ 0.51
LIME1-202ENST00000444951 PKMYT1Q99640 499 aa18.25■□□□□ 0.51
LIME1-202ENST00000444951 SFXN1Q9H9B4 322 aa18.25■□□□□ 0.51
LIME1-202ENST00000444951 FAM86C1Q9NVL1 165 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms