RNA–Protein interactions for RNA: ENST00000444532.2

CCDC188-202, Transcript of coiled-coil domain containing 188, humanhuman

TSL 3

Gene CCDC188, Length 628 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-202ENST00000444532 FLCNQ8NFG4 579 aa19.84■□□□□ 0.77
CCDC188-202ENST00000444532 NELFBQ8WX92 580 aa19.84■□□□□ 0.77
CCDC188-202ENST00000444532 C8orf48Q96LL4 319 aa19.84■□□□□ 0.77
CCDC188-202ENST00000444532 B3GNT5Q9BYG0 378 aa19.84■□□□□ 0.77
CCDC188-202ENST00000444532 METTL14Q9HCE5 456 aaKnown RBP19.84■□□□□ 0.77
CCDC188-202ENST00000444532 EHD2Q9NZN4 543 aa19.84■□□□□ 0.77
CCDC188-202ENST00000444532 OBSL1O75147 1896 aa19.84■□□□□ 0.77
CCDC188-202ENST00000444532 ATP8B3O60423 1300 aa19.83■□□□□ 0.77
CCDC188-202ENST00000444532 HEPACAM2A8MVW5 462 aa19.83■□□□□ 0.77
CCDC188-202ENST00000444532 TRIM21P19474 475 aaKnown RBP19.83■□□□□ 0.77
CCDC188-202ENST00000444532 CYP4F8P98187 520 aa19.83■□□□□ 0.77
CCDC188-202ENST00000444532 CAMK4Q16566 473 aa19.83■□□□□ 0.77
CCDC188-202ENST00000444532 SLC44A4Q53GD3 710 aa19.83■□□□□ 0.77
CCDC188-202ENST00000444532 CWF19L1Q69YN2 538 aaKnown RBP19.83■□□□□ 0.77
CCDC188-202ENST00000444532 TTI2Q6NXR4 508 aa19.83■□□□□ 0.77
CCDC188-202ENST00000444532 FRMD5Q7Z6J6 570 aa19.83■□□□□ 0.77
CCDC188-202ENST00000444532 CRYBG2Q8N1P7 616 aa19.83■□□□□ 0.77
CCDC188-202ENST00000444532 MRPS31Q92665 395 aaKnown RBP19.83■□□□□ 0.77
CCDC188-202ENST00000444532 IRF7Q92985 503 aa19.83■□□□□ 0.77
CCDC188-202ENST00000444532 DUSP9Q99956 384 aaKnown RBP19.83■□□□□ 0.77
CCDC188-202ENST00000444532 SLC46A2Q9BY10 475 aa19.83■□□□□ 0.77
CCDC188-202ENST00000444532 NIF3L1Q9GZT8 377 aa19.83■□□□□ 0.77
CCDC188-202ENST00000444532 APOBEC3GQ9HC16 384 aaKnown RBP19.83■□□□□ 0.77
CCDC188-202ENST00000444532 RAB20Q9NX57 234 aa19.83■□□□□ 0.77
CCDC188-202ENST00000444532 OBP2AQ9NY56 170 aa19.83■□□□□ 0.77
CCDC188-202ENST00000444532 ZDBF2Q9HCK1 2354 aa19.82■□□□□ 0.76
CCDC188-202ENST00000444532 STK25O00506 426 aa19.82■□□□□ 0.76
CCDC188-202ENST00000444532 AOC1P19801 751 aa19.82■□□□□ 0.76
CCDC188-202ENST00000444532 RFX1P22670 979 aa19.82■□□□□ 0.76
CCDC188-202ENST00000444532 NDST1P52848 882 aa19.82■□□□□ 0.76
CCDC188-202ENST00000444532 STARD6P59095 220 aa19.82■□□□□ 0.76
CCDC188-202ENST00000444532 PRKCQQ04759 706 aa19.82■□□□□ 0.76
CCDC188-202ENST00000444532 INCA1Q0VD86 236 aa19.82■□□□□ 0.76
CCDC188-202ENST00000444532 GRM2Q14416 872 aa19.82■□□□□ 0.76
CCDC188-202ENST00000444532 DCAF17Q5H9S7 520 aaPredicted RBP19.82■□□□□ 0.76
CCDC188-202ENST00000444532 IER5LQ5T953 404 aa19.82■□□□□ 0.76
CCDC188-202ENST00000444532 DENND5BQ6ZUT9 1274 aa19.82■□□□□ 0.76
CCDC188-202ENST00000444532 ACOT1Q86TX2 421 aa19.82■□□□□ 0.76
CCDC188-202ENST00000444532 CMTM8Q8IZV2 173 aa19.82■□□□□ 0.76
CCDC188-202ENST00000444532 STKLD1Q8NE28 680 aa19.82■□□□□ 0.76
CCDC188-202ENST00000444532 DNASE1L2Q92874 299 aa19.82■□□□□ 0.76
CCDC188-202ENST00000444532 DNAI2Q9GZS0 605 aa19.82■□□□□ 0.76
CCDC188-202ENST00000444532 BRD9Q9H8M2 597 aa19.82■□□□□ 0.76
CCDC188-202ENST00000444532 TBC1D17Q9HA65 648 aa19.82■□□□□ 0.76
CCDC188-202ENST00000444532 TRPV5Q9NQA5 729 aa19.82■□□□□ 0.76
CCDC188-202ENST00000444532 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.82■□□□□ 0.76
CCDC188-202ENST00000444532 COQ4Q9Y3A0 265 aa19.82■□□□□ 0.76
CCDC188-202ENST00000444532 F8VP50 259 aa19.81■□□□□ 0.76
CCDC188-202ENST00000444532 DPYSL4O14531 572 aa19.81■□□□□ 0.76
CCDC188-202ENST00000444532 PAK1Q13153 545 aa19.81■□□□□ 0.76
CCDC188-202ENST00000444532 MLF2Q15773 248 aaPredicted RBP19.81■□□□□ 0.76
CCDC188-202ENST00000444532 WDR44Q5JSH3 913 aa19.81■□□□□ 0.76
CCDC188-202ENST00000444532 MON1AQ86VX9 555 aa19.81■□□□□ 0.76
CCDC188-202ENST00000444532 TTC39CQ8N584 583 aa19.81■□□□□ 0.76
CCDC188-202ENST00000444532 TMEM105Q8N8V8 129 aa19.81■□□□□ 0.76
CCDC188-202ENST00000444532 SEMA4DQ92854 862 aa19.81■□□□□ 0.76
CCDC188-202ENST00000444532 SLC35C1Q96A29 364 aa19.81■□□□□ 0.76
CCDC188-202ENST00000444532 ZNF518BQ9C0D4 1074 aa19.81■□□□□ 0.76
CCDC188-202ENST00000444532 CTNND2Q9UQB3 1225 aa19.81■□□□□ 0.76
CCDC188-202ENST00000444532 CLDN5O00501 218 aa19.8■□□□□ 0.76
CCDC188-202ENST00000444532 ZNF263O14978 683 aa19.8■□□□□ 0.76
CCDC188-202ENST00000444532 GDI1P31150 447 aa19.8■□□□□ 0.76
CCDC188-202ENST00000444532 AVPR1AP37288 418 aa19.8■□□□□ 0.76
CCDC188-202ENST00000444532 FCHO2Q0JRZ9 810 aa19.8■□□□□ 0.76
CCDC188-202ENST00000444532 CCDC40Q4G0X9 1142 aa19.8■□□□□ 0.76
CCDC188-202ENST00000444532 CBWD6Q4V339 395 aa19.8■□□□□ 0.76
CCDC188-202ENST00000444532 CBWD3Q5JTY5 395 aa19.8■□□□□ 0.76
CCDC188-202ENST00000444532 CBWD5Q5RIA9 395 aa19.8■□□□□ 0.76
CCDC188-202ENST00000444532 YAF2Q8IY57 180 aa19.8■□□□□ 0.76
CCDC188-202ENST00000444532 MAB21L3Q8N8X9 362 aa19.8■□□□□ 0.76
CCDC188-202ENST00000444532 RSPRY1Q96DX4 576 aa19.8■□□□□ 0.76
CCDC188-202ENST00000444532 IPO9Q96P70 1041 aaKnown RBP19.8■□□□□ 0.76
CCDC188-202ENST00000444532 MED10Q9BTT4 135 aa19.8■□□□□ 0.76
CCDC188-202ENST00000444532 TTLL2Q9BWV7 592 aa19.8■□□□□ 0.76
CCDC188-202ENST00000444532 FAM124BQ9H5Z6 455 aaPredicted RBP19.8■□□□□ 0.76
CCDC188-202ENST00000444532 ZNF638Q14966 1978 aaKnown RBP19.8■□□□□ 0.76
CCDC188-202ENST00000444532 CHADO15335 359 aa19.79■□□□□ 0.76
CCDC188-202ENST00000444532 PI15O43692 258 aa19.79■□□□□ 0.76
CCDC188-202ENST00000444532 LRRN2O75325 713 aa19.79■□□□□ 0.76
CCDC188-202ENST00000444532 TADA3O75528 432 aa19.79■□□□□ 0.76
CCDC188-202ENST00000444532 FGFR1OPO95684 399 aaKnown RBP19.79■□□□□ 0.76
CCDC188-202ENST00000444532 GNA14O95837 355 aa19.79■□□□□ 0.76
CCDC188-202ENST00000444532 PPP3CCP48454 512 aa19.79■□□□□ 0.76
CCDC188-202ENST00000444532 CACNA2D1P54289 1103 aa19.79■□□□□ 0.76
CCDC188-202ENST00000444532 TXNDC8Q6A555 127 aa19.79■□□□□ 0.76
CCDC188-202ENST00000444532 PAQR9Q6ZVX9 377 aa19.79■□□□□ 0.76
CCDC188-202ENST00000444532 FAM35AQ86V20 835 aa19.79■□□□□ 0.76
CCDC188-202ENST00000444532 GPIHBP1Q8IV16 184 aa19.79■□□□□ 0.76
CCDC188-202ENST00000444532 FUKQ8N0W3 1084 aa19.79■□□□□ 0.76
CCDC188-202ENST00000444532 CELF5Q8N6W0 485 aaKnown RBP19.79■□□□□ 0.76
CCDC188-202ENST00000444532 SMARCD1Q96GM5 515 aa19.79■□□□□ 0.76
CCDC188-202ENST00000444532 DDX23Q9BUQ8 820 aaKnown RBP19.79■□□□□ 0.76
CCDC188-202ENST00000444532 NT5C1AQ9BXI3 368 aa19.79■□□□□ 0.76
CCDC188-202ENST00000444532 CLSTN2Q9H4D0 955 aa19.79■□□□□ 0.76
CCDC188-202ENST00000444532 TMEM30AQ9NV96 361 aa19.79■□□□□ 0.76
CCDC188-202ENST00000444532 HMGXB4Q9UGU5 601 aa19.79■□□□□ 0.76
CCDC188-202ENST00000444532 NCANO14594 1321 aa19.78■□□□□ 0.76
CCDC188-202ENST00000444532 ANAPC1Q9H1A4 1944 aa19.78■□□□□ 0.76
CCDC188-202ENST00000444532 KANSL1LA0AUZ9 987 aa19.78■□□□□ 0.76
CCDC188-202ENST00000444532 PMM2O15305 246 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms