RNA–Protein interactions for RNA: ENST00000444177.1

TREX1-202, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,200 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-202ENST00000444177 PSMC2P35998 433 aaKnown RBP14.96□□□□□ -0.01
TREX1-202ENST00000444177 PIK3CAP42336 1068 aa14.96□□□□□ -0.01
TREX1-202ENST00000444177 GPR15P49685 360 aa14.96□□□□□ -0.01
TREX1-202ENST00000444177 KPNA1P52294 538 aaPredicted RBP14.96□□□□□ -0.01
TREX1-202ENST00000444177 DDR2Q16832 855 aa14.96□□□□□ -0.01
TREX1-202ENST00000444177 EDRF1Q3B7T1 1238 aa14.96□□□□□ -0.01
TREX1-202ENST00000444177 ARHGAP29Q52LW3 1261 aa14.96□□□□□ -0.01
TREX1-202ENST00000444177 ISM2Q6H9L7 571 aa14.96□□□□□ -0.01
TREX1-202ENST00000444177 TSSK4Q6SA08 328 aa14.96□□□□□ -0.01
TREX1-202ENST00000444177 SCARA5Q6ZMJ2 495 aa14.96□□□□□ -0.01
TREX1-202ENST00000444177 INTS8Q75QN2 995 aaKnown RBP14.96□□□□□ -0.01
TREX1-202ENST00000444177 TMEM150AQ86TG1 271 aa14.96□□□□□ -0.01
TREX1-202ENST00000444177 SPATA2LQ8IUW3 424 aaPredicted RBP14.96□□□□□ -0.01
TREX1-202ENST00000444177 SUMF1Q8NBK3 374 aa14.96□□□□□ -0.01
TREX1-202ENST00000444177 SPATA20Q8TB22 786 aa14.96□□□□□ -0.01
TREX1-202ENST00000444177 BPIFB1Q8TDL5 484 aa14.96□□□□□ -0.01
TREX1-202ENST00000444177 ATRIPQ8WXE1 791 aa14.96□□□□□ -0.01
TREX1-202ENST00000444177 NELL1Q92832 810 aa14.96□□□□□ -0.01
TREX1-202ENST00000444177 MYLPFQ96A32 169 aa14.96□□□□□ -0.01
TREX1-202ENST00000444177 ZFYVE19Q96K21 471 aa14.96□□□□□ -0.01
TREX1-202ENST00000444177 PKMYT1Q99640 499 aa14.96□□□□□ -0.01
TREX1-202ENST00000444177 SMG9Q9H0W8 520 aaKnown RBP14.96□□□□□ -0.01
TREX1-202ENST00000444177 XYLT2Q9H1B5 865 aa14.96□□□□□ -0.01
TREX1-202ENST00000444177 CHRDQ9H2X0 955 aa14.96□□□□□ -0.01
TREX1-202ENST00000444177 SNX25Q9H3E2 840 aa14.96□□□□□ -0.01
TREX1-202ENST00000444177 C8orf33Q9H7E9 229 aaPredicted RBP14.96□□□□□ -0.01
TREX1-202ENST00000444177 ZSCAN32Q9NX65 697 aa14.96□□□□□ -0.01
TREX1-202ENST00000444177 MAN1B1Q9UKM7 699 aa14.96□□□□□ -0.01
TREX1-202ENST00000444177 CDH9Q9ULB4 789 aa14.96□□□□□ -0.01
TREX1-202ENST00000444177 PCDHGA2Q9Y5H1 932 aa14.96□□□□□ -0.01
TREX1-202ENST00000444177 MYBPHLA2RUH7 354 aa14.95□□□□□ -0.02
TREX1-202ENST00000444177 SLC38A8A6NNN8 435 aa14.95□□□□□ -0.02
TREX1-202ENST00000444177 CETN3O15182 167 aa14.95□□□□□ -0.02
TREX1-202ENST00000444177 VNN1O95497 513 aa14.95□□□□□ -0.02
TREX1-202ENST00000444177 PDGFRBP09619 1106 aa14.95□□□□□ -0.02
TREX1-202ENST00000444177 EPB41P11171 864 aaKnown RBP14.95□□□□□ -0.02
TREX1-202ENST00000444177 CHRNB1P11230 501 aa14.95□□□□□ -0.02
TREX1-202ENST00000444177 LMO2P25791 158 aa14.95□□□□□ -0.02
TREX1-202ENST00000444177 SOX9P48436 509 aa14.95□□□□□ -0.02
TREX1-202ENST00000444177 NLRP12P59046 1061 aa14.95□□□□□ -0.02
TREX1-202ENST00000444177 RPL10AP62906 217 aaKnown RBP14.95□□□□□ -0.02
TREX1-202ENST00000444177 STIM1Q13586 685 aa14.95□□□□□ -0.02
TREX1-202ENST00000444177 ZACNQ401N2 412 aa14.95□□□□□ -0.02
TREX1-202ENST00000444177 COBLL1Q53SF7 1204 aa14.95□□□□□ -0.02
TREX1-202ENST00000444177 ZNF667Q5HYK9 610 aa14.95□□□□□ -0.02
TREX1-202ENST00000444177 SDHAF4Q5VUM1 108 aa14.95□□□□□ -0.02
TREX1-202ENST00000444177 SV2AQ7L0J3 742 aa14.95□□□□□ -0.02
TREX1-202ENST00000444177 LIMS2Q7Z4I7 341 aa14.95□□□□□ -0.02
TREX1-202ENST00000444177 CMTM8Q8IZV2 173 aa14.95□□□□□ -0.02
TREX1-202ENST00000444177 CELF5Q8N6W0 485 aaKnown RBP14.95□□□□□ -0.02
TREX1-202ENST00000444177 ZBTB44Q8NCP5 570 aa14.95□□□□□ -0.02
TREX1-202ENST00000444177 STKLD1Q8NE28 680 aa14.95□□□□□ -0.02
TREX1-202ENST00000444177 OR6B3Q8NGW1 331 aa14.95□□□□□ -0.02
TREX1-202ENST00000444177 TTC8Q8TAM2 541 aa14.95□□□□□ -0.02
TREX1-202ENST00000444177 ELMO3Q96BJ8 720 aa14.95□□□□□ -0.02
TREX1-202ENST00000444177 EEF2KMTQ96G04 330 aa14.95□□□□□ -0.02
TREX1-202ENST00000444177 MSANTD3Q96H12 275 aa14.95□□□□□ -0.02
TREX1-202ENST00000444177 GTPBP4Q9BZE4 634 aaKnown RBP14.95□□□□□ -0.02
TREX1-202ENST00000444177 SMYD3Q9H7B4 428 aa14.95□□□□□ -0.02
TREX1-202ENST00000444177 ABCB6Q9NP58 842 aa14.95□□□□□ -0.02
TREX1-202ENST00000444177 PRMT8Q9NR22 394 aaPredicted RBP14.95□□□□□ -0.02
TREX1-202ENST00000444177 GTSE1Q9NYZ3 720 aa14.95□□□□□ -0.02
TREX1-202ENST00000444177 ZMYM5Q9UJ78 669 aa14.95□□□□□ -0.02
TREX1-202ENST00000444177 TICRRQ7Z2Z1 1910 aa14.94□□□□□ -0.02
TREX1-202ENST00000444177 TRIM49BA6NDI0 452 aa14.94□□□□□ -0.02
TREX1-202ENST00000444177 SPECC1L-ADORA2AF8WAN1 911 aa14.94□□□□□ -0.02
TREX1-202ENST00000444177 GOLGA6L22H0YM25 854 aa14.94□□□□□ -0.02
TREX1-202ENST00000444177 PSMA7O14818 248 aa14.94□□□□□ -0.02
TREX1-202ENST00000444177 IKBKBO14920 756 aa14.94□□□□□ -0.02
TREX1-202ENST00000444177 ATP2C2O75185 946 aa14.94□□□□□ -0.02
TREX1-202ENST00000444177 TACC1O75410 805 aa14.94□□□□□ -0.02
TREX1-202ENST00000444177 CSH1P0DML2 217 aa14.94□□□□□ -0.02
TREX1-202ENST00000444177 CSH2P0DML3 217 aa14.94□□□□□ -0.02
TREX1-202ENST00000444177 RAP1GAPP47736 663 aa14.94□□□□□ -0.02
TREX1-202ENST00000444177 GCLMP48507 274 aa14.94□□□□□ -0.02
TREX1-202ENST00000444177 PLCB2Q00722 1185 aa14.94□□□□□ -0.02
TREX1-202ENST00000444177 CYP27A1Q02318 531 aa14.94□□□□□ -0.02
TREX1-202ENST00000444177 C1orf220Q5T0J3 134 aa14.94□□□□□ -0.02
TREX1-202ENST00000444177 FAM171BQ6P995 826 aa14.94□□□□□ -0.02
TREX1-202ENST00000444177 C1orf228Q6PIY5 440 aa14.94□□□□□ -0.02
TREX1-202ENST00000444177 TXNDC11Q6PKC3 985 aa14.94□□□□□ -0.02
TREX1-202ENST00000444177 C4orf50Q6ZRC1 276 aa14.94□□□□□ -0.02
TREX1-202ENST00000444177 RALGPS2Q86X27 583 aaPredicted RBP14.94□□□□□ -0.02
TREX1-202ENST00000444177 MAB21L3Q8N8X9 362 aa14.94□□□□□ -0.02
TREX1-202ENST00000444177 RUBCNQ92622 972 aa14.94□□□□□ -0.02
TREX1-202ENST00000444177 IER2Q9BTL4 223 aa14.94□□□□□ -0.02
TREX1-202ENST00000444177 VRTNQ9H8Y1 702 aa14.94□□□□□ -0.02
TREX1-202ENST00000444177 CRTAC1Q9NQ79 661 aa14.94□□□□□ -0.02
TREX1-202ENST00000444177 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.94□□□□□ -0.02
TREX1-202ENST00000444177 THG1LQ9NWX6 298 aaKnown RBP14.94□□□□□ -0.02
TREX1-202ENST00000444177 MAGED2Q9UNF1 606 aaPredicted RBP14.94□□□□□ -0.02
TREX1-202ENST00000444177 COL4A2P08572 1712 aa14.93□□□□□ -0.02
TREX1-202ENST00000444177 SOBPA7XYQ1 873 aa14.93□□□□□ -0.02
TREX1-202ENST00000444177 A8MXQ7 604 aa14.93□□□□□ -0.02
TREX1-202ENST00000444177 BIN1O00499 593 aa14.93□□□□□ -0.02
TREX1-202ENST00000444177 LILRB5O75023 590 aa14.93□□□□□ -0.02
TREX1-202ENST00000444177 HLA-DRAP01903 254 aa14.93□□□□□ -0.02
TREX1-202ENST00000444177 P4HA1P13674 534 aa14.93□□□□□ -0.02
TREX1-202ENST00000444177 DDX6P26196 483 aaKnown RBP eCLIP14.93□□□□□ -0.02
TREX1-202ENST00000444177 CTHP32929 405 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms