RNA–Protein interactions for RNA: ENST00000443443.1

VPS50-206, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-206ENST00000443443 UCP3P55916 312 aa5.68□□□□□ -1.5
VPS50-206ENST00000443443 EEFSECP57772 596 aaKnown RBP5.68□□□□□ -1.5
VPS50-206ENST00000443443 MAP9Q49MG5 647 aa5.68□□□□□ -1.5
VPS50-206ENST00000443443 MAVSQ7Z434 540 aa5.68□□□□□ -1.5
VPS50-206ENST00000443443 DAAM2Q86T65 1068 aa5.68□□□□□ -1.5
VPS50-206ENST00000443443 TPH2Q8IWU9 490 aa5.68□□□□□ -1.5
VPS50-206ENST00000443443 CNPY4Q8N129 248 aa5.68□□□□□ -1.5
VPS50-206ENST00000443443 SEMA6DQ8NFY4 1073 aa5.68□□□□□ -1.5
VPS50-206ENST00000443443 DIS3LQ8TF46 1054 aaKnown RBP5.68□□□□□ -1.5
VPS50-206ENST00000443443 XAGE5Q8WWM1 108 aa5.68□□□□□ -1.5
VPS50-206ENST00000443443 GLOD4Q9HC38 313 aa5.68□□□□□ -1.5
VPS50-206ENST00000443443 RNF7Q9UBF6 113 aa5.68□□□□□ -1.5
VPS50-206ENST00000443443 SWAP70Q9UH65 585 aa5.68□□□□□ -1.5
VPS50-206ENST00000443443 SHOC2Q9UQ13 582 aa5.68□□□□□ -1.5
VPS50-206ENST00000443443 SSX2IPQ9Y2D8 614 aa5.68□□□□□ -1.5
VPS50-206ENST00000443443 MRPS17Q9Y2R5 130 aaKnown RBP5.68□□□□□ -1.5
VPS50-206ENST00000443443 EID1Q9Y6B2 187 aa5.68□□□□□ -1.5
VPS50-206ENST00000443443 WDR91A4D1P6 747 aa5.67□□□□□ -1.5
VPS50-206ENST00000443443 JTBO76095 146 aa5.67□□□□□ -1.5
VPS50-206ENST00000443443 ONECUT2O95948 504 aa5.67□□□□□ -1.5
VPS50-206ENST00000443443 KRT18P05783 430 aaKnown RBP5.67□□□□□ -1.5
VPS50-206ENST00000443443 IL6RP08887 468 aaPredicted RBP5.67□□□□□ -1.5
VPS50-206ENST00000443443 HTR1BP28222 390 aa5.67□□□□□ -1.5
VPS50-206ENST00000443443 SLC10A2Q12908 348 aaPredicted RBP5.67□□□□□ -1.5
VPS50-206ENST00000443443 PIN1Q13526 163 aaPredicted RBP5.67□□□□□ -1.5
VPS50-206ENST00000443443 BRD3Q15059 726 aa5.67□□□□□ -1.5
VPS50-206ENST00000443443 LLGL1Q15334 1064 aa5.67□□□□□ -1.5
VPS50-206ENST00000443443 ANKRD16Q6P6B7 361 aa5.67□□□□□ -1.5
VPS50-206ENST00000443443 DENND1CQ8IV53 801 aa5.67□□□□□ -1.5
VPS50-206ENST00000443443 SLC15A4Q8N697 577 aa5.67□□□□□ -1.5
VPS50-206ENST00000443443 ATG4AQ8WYN0 398 aa5.67□□□□□ -1.5
VPS50-206ENST00000443443 GLG1Q92896 1179 aa5.67□□□□□ -1.5
VPS50-206ENST00000443443 P2RX7Q99572 595 aaKnown RBP5.67□□□□□ -1.5
VPS50-206ENST00000443443 RHOBTB2Q9BYZ6 727 aa5.67□□□□□ -1.5
VPS50-206ENST00000443443 TMX4Q9H1E5 349 aaPredicted RBP5.67□□□□□ -1.5
VPS50-206ENST00000443443 SLC12A5Q9H2X9 1139 aa5.67□□□□□ -1.5
VPS50-206ENST00000443443 PIH1D1Q9NWS0 290 aaKnown RBP5.67□□□□□ -1.5
VPS50-206ENST00000443443 DLL3Q9NYJ7 618 aa5.67□□□□□ -1.5
VPS50-206ENST00000443443 FBXO9Q9UK97 447 aaPredicted RBP5.67□□□□□ -1.5
VPS50-206ENST00000443443 PNMA8BQ9ULN7 279 aaPredicted RBP5.67□□□□□ -1.5
VPS50-206ENST00000443443 NDRG4Q9ULP0 352 aaKnown RBP5.67□□□□□ -1.5
VPS50-206ENST00000443443 A0A088AWK7 358 aa5.66□□□□□ -1.5
VPS50-206ENST00000443443 E2F8A0AVK6 867 aa5.66□□□□□ -1.5
VPS50-206ENST00000443443 A1L4Q6 167 aa5.66□□□□□ -1.5
VPS50-206ENST00000443443 CGB1A6NKQ9 187 aa5.66□□□□□ -1.5
VPS50-206ENST00000443443 EXOC5O00471 708 aa5.66□□□□□ -1.5
VPS50-206ENST00000443443 AKAP10O43572 662 aa5.66□□□□□ -1.5
VPS50-206ENST00000443443 LDHAP00338 332 aaKnown RBP5.66□□□□□ -1.5
VPS50-206ENST00000443443 THP07101 528 aa5.66□□□□□ -1.5
VPS50-206ENST00000443443 CELA2AP08217 269 aa5.66□□□□□ -1.5
VPS50-206ENST00000443443 PPIFP30405 207 aaKnown RBP5.66□□□□□ -1.5
VPS50-206ENST00000443443 VIPR2P41587 438 aa5.66□□□□□ -1.5
VPS50-206ENST00000443443 RAB1AP62820 205 aa5.66□□□□□ -1.5
VPS50-206ENST00000443443 KRT17Q04695 432 aa5.66□□□□□ -1.5
VPS50-206ENST00000443443 MCL1Q07820 350 aa5.66□□□□□ -1.5
VPS50-206ENST00000443443 LMOD3Q0VAK6 560 aa5.66□□□□□ -1.5
VPS50-206ENST00000443443 DHX8Q14562 1220 aaKnown RBP5.66□□□□□ -1.5
VPS50-206ENST00000443443 PPP2R5AQ15172 486 aa5.66□□□□□ -1.5
VPS50-206ENST00000443443 AARS2Q5JTZ9 985 aaKnown RBP5.66□□□□□ -1.5
VPS50-206ENST00000443443 ZNF804AQ7Z570 1209 aa5.66□□□□□ -1.5
VPS50-206ENST00000443443 WDR53Q7Z5U6 358 aaPredicted RBP5.66□□□□□ -1.5
VPS50-206ENST00000443443 TBC1D5Q92609 795 aa5.66□□□□□ -1.5
VPS50-206ENST00000443443 R3HDM4Q96D70 268 aa5.66□□□□□ -1.5
VPS50-206ENST00000443443 MPHOSPH6Q99547 160 aaKnown RBP5.66□□□□□ -1.5
VPS50-206ENST00000443443 NMRK2Q9NPI5 230 aa5.66□□□□□ -1.5
VPS50-206ENST00000443443 RPS6KL1Q9Y6S9 549 aa5.66□□□□□ -1.5
VPS50-206ENST00000443443 FNDC1Q4ZHG4 1894 aaPredicted RBP5.65□□□□□ -1.5
VPS50-206ENST00000443443 A0A1W2PPL8 197 aa5.65□□□□□ -1.5
VPS50-206ENST00000443443 WIPF3A6NGB9 483 aa5.65□□□□□ -1.5
VPS50-206ENST00000443443 LINC01548A6NM66 108 aa5.65□□□□□ -1.5
VPS50-206ENST00000443443 H0YIZ8 118 aa5.65□□□□□ -1.5
VPS50-206ENST00000443443 CCER2I3L3R5 266 aa5.65□□□□□ -1.5
VPS50-206ENST00000443443 UBXN7O94888 489 aa5.65□□□□□ -1.5
VPS50-206ENST00000443443 ERBB2P04626 1255 aa5.65□□□□□ -1.5
VPS50-206ENST00000443443 MYBP10242 640 aa5.65□□□□□ -1.5
VPS50-206ENST00000443443 PCSK6P29122 969 aa5.65□□□□□ -1.5
VPS50-206ENST00000443443 GNALP38405 381 aa5.65□□□□□ -1.5
VPS50-206ENST00000443443 SLC11A2P49281 568 aa5.65□□□□□ -1.5
VPS50-206ENST00000443443 TFF2Q03403 129 aa5.65□□□□□ -1.5
VPS50-206ENST00000443443 EZH2Q15910 746 aaKnown RBP5.65□□□□□ -1.5
VPS50-206ENST00000443443 DEPDC1Q5TB30 811 aa5.65□□□□□ -1.5
VPS50-206ENST00000443443 PPP4R4Q6NUP7 873 aa5.65□□□□□ -1.5
VPS50-206ENST00000443443 NAPRTQ6XQN6 538 aa5.65□□□□□ -1.5
VPS50-206ENST00000443443 ZNF782Q6ZMW2 699 aaPredicted RBP5.65□□□□□ -1.5
VPS50-206ENST00000443443 PARS2Q7L3T8 475 aaKnown RBP5.65□□□□□ -1.5
VPS50-206ENST00000443443 MPP5Q8N3R9 675 aa5.65□□□□□ -1.5
VPS50-206ENST00000443443 DNAJC5GQ8N7S2 189 aa5.65□□□□□ -1.5
VPS50-206ENST00000443443 PPP1R35Q8TAP8 253 aa5.65□□□□□ -1.5
VPS50-206ENST00000443443 SLC35G2Q8TBE7 412 aa5.65□□□□□ -1.5
VPS50-206ENST00000443443 SMG7Q92540 1137 aaKnown RBP5.65□□□□□ -1.5
VPS50-206ENST00000443443 NT5C1BQ96P26 610 aa5.65□□□□□ -1.5
VPS50-206ENST00000443443 SERGEFQ9UGK8 458 aa5.65□□□□□ -1.5
VPS50-206ENST00000443443 H3BML4 177 aa5.64□□□□□ -1.51
VPS50-206ENST00000443443 INO80B-WBP1J3KQ70 363 aa5.64□□□□□ -1.51
VPS50-206ENST00000443443 CYP2D6P10635 497 aa5.64□□□□□ -1.51
VPS50-206ENST00000443443 KITP10721 976 aa5.64□□□□□ -1.51
VPS50-206ENST00000443443 CYP2C9P11712 490 aa5.64□□□□□ -1.51
VPS50-206ENST00000443443 XRCC6P12956 609 aaKnown RBP eCLIP5.64□□□□□ -1.51
VPS50-206ENST00000443443 BDNFP23560 247 aa5.64□□□□□ -1.51
VPS50-206ENST00000443443 MPGP29372 298 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms