RNA–Protein interactions for RNA: ENST00000443197.5

CALD1-210, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 4,173 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-210ENST00000443197 NOCTQ9UK39 431 aaKnown RBP11.09□□□□□ -0.63
CALD1-210ENST00000443197 MYH11P35749 1972 aa11.09□□□□□ -0.63
CALD1-210ENST00000443197 FAM200BP0CF97 657 aa11.09□□□□□ -0.63
CALD1-210ENST00000443197 ETS1P14921 441 aa11.09□□□□□ -0.63
CALD1-210ENST00000443197 FLT3LGP49771 235 aa11.09□□□□□ -0.63
CALD1-210ENST00000443197 GLB1LQ6UWU2 654 aa11.09□□□□□ -0.63
CALD1-210ENST00000443197 EFCAB13Q8IY85 973 aa11.09□□□□□ -0.63
CALD1-210ENST00000443197 EXD1Q8NHP7 514 aa11.09□□□□□ -0.63
CALD1-210ENST00000443197 USP33Q8TEY7 942 aa11.09□□□□□ -0.63
CALD1-210ENST00000443197 CDKL2Q92772 493 aa11.09□□□□□ -0.63
CALD1-210ENST00000443197 ATP2A3Q93084 1043 aa11.09□□□□□ -0.63
CALD1-210ENST00000443197 ATXN7L3BQ96GX2 97 aa11.09□□□□□ -0.63
CALD1-210ENST00000443197 RSAD1Q9HA92 442 aa11.09□□□□□ -0.63
CALD1-210ENST00000443197 CYP3A43Q9HB55 503 aa11.09□□□□□ -0.63
CALD1-210ENST00000443197 PPME1Q9Y570 386 aa11.09□□□□□ -0.63
CALD1-210ENST00000443197 ARAP2Q8WZ64 1704 aa11.09□□□□□ -0.63
CALD1-210ENST00000443197 VNN1O95497 513 aa11.09□□□□□ -0.63
CALD1-210ENST00000443197 ELNP15502 786 aa11.09□□□□□ -0.63
CALD1-210ENST00000443197 ATICP31939 592 aa11.09□□□□□ -0.63
CALD1-210ENST00000443197 MLH1P40692 756 aa11.09□□□□□ -0.63
CALD1-210ENST00000443197 CCDC6Q16204 474 aa11.09□□□□□ -0.63
CALD1-210ENST00000443197 BTBD8Q5XKL5 378 aa11.09□□□□□ -0.63
CALD1-210ENST00000443197 RNF180Q86T96 592 aa11.09□□□□□ -0.63
CALD1-210ENST00000443197 ZNF410Q86VK4 478 aa11.09□□□□□ -0.63
CALD1-210ENST00000443197 BORCS6Q96GS4 357 aa11.09□□□□□ -0.63
CALD1-210ENST00000443197 ZFP42Q96MM3 310 aa11.09□□□□□ -0.63
CALD1-210ENST00000443197 EIF2AQ9BY44 585 aaKnown RBP11.09□□□□□ -0.63
CALD1-210ENST00000443197 SLC13A1Q9BZW2 595 aa11.09□□□□□ -0.63
CALD1-210ENST00000443197 ABI2Q9NYB9 513 aaPredicted RBP11.09□□□□□ -0.63
CALD1-210ENST00000443197 CPSF3Q9UKF6 684 aaKnown RBP11.09□□□□□ -0.63
CALD1-210ENST00000443197 A0A087WUV0 522 aaPredicted RBP11.09□□□□□ -0.63
CALD1-210ENST00000443197 GMNCA6NCL1 334 aa11.09□□□□□ -0.63
CALD1-210ENST00000443197 CHN1P15882 459 aa11.09□□□□□ -0.63
CALD1-210ENST00000443197 MIPP30301 263 aa11.09□□□□□ -0.63
CALD1-210ENST00000443197 FLT3P36888 993 aa11.09□□□□□ -0.63
CALD1-210ENST00000443197 MDH1P40925 334 aaKnown RBP11.09□□□□□ -0.63
CALD1-210ENST00000443197 SEPT6Q14141 434 aa11.09□□□□□ -0.63
CALD1-210ENST00000443197 TTC31Q49AM3 519 aaPredicted RBP11.09□□□□□ -0.63
CALD1-210ENST00000443197 ANKRD20A3Q5VUR7 823 aa11.09□□□□□ -0.63
CALD1-210ENST00000443197 C3orf62Q6ZUJ4 267 aa11.09□□□□□ -0.63
CALD1-210ENST00000443197 TAS1R3Q7RTX0 852 aa11.09□□□□□ -0.63
CALD1-210ENST00000443197 SPATA2LQ8IUW3 424 aaPredicted RBP11.09□□□□□ -0.63
CALD1-210ENST00000443197 CD302Q8IX05 232 aa11.09□□□□□ -0.63
CALD1-210ENST00000443197 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.09□□□□□ -0.632e-6■■□□□ 12.4
CALD1-210ENST00000443197 CDC42EP4Q9H3Q1 356 aaKnown RBP11.09□□□□□ -0.63
CALD1-210ENST00000443197 AVENQ9NQS1 362 aaPredicted RBP11.09□□□□□ -0.63
CALD1-210ENST00000443197 GDF3Q9NR23 364 aa11.09□□□□□ -0.63
CALD1-210ENST00000443197 SLC38A7Q9NVC3 462 aa11.09□□□□□ -0.63
CALD1-210ENST00000443197 DDX43Q9NXZ2 648 aaKnown RBP11.09□□□□□ -0.63
CALD1-210ENST00000443197 TUBGCP4Q9UGJ1 667 aa11.09□□□□□ -0.63
CALD1-210ENST00000443197 NCANO14594 1321 aa11.08□□□□□ -0.63
CALD1-210ENST00000443197 PTPRJQ12913 1337 aa11.08□□□□□ -0.63
CALD1-210ENST00000443197 UBR3Q6ZT12 1888 aa11.08□□□□□ -0.64
CALD1-210ENST00000443197 PIAS1O75925 651 aa11.08□□□□□ -0.64
CALD1-210ENST00000443197 CTCFP49711 727 aaPredicted RBP11.08□□□□□ -0.64
CALD1-210ENST00000443197 SLC12A2P55011 1212 aa11.08□□□□□ -0.64
CALD1-210ENST00000443197 MCL1Q07820 350 aa11.08□□□□□ -0.64
CALD1-210ENST00000443197 ARHGAP1Q07960 439 aa11.08□□□□□ -0.64
CALD1-210ENST00000443197 GEN1Q17RS7 908 aa11.08□□□□□ -0.64
CALD1-210ENST00000443197 CHADLQ6NUI6 762 aa11.08□□□□□ -0.64
CALD1-210ENST00000443197 CCDC117Q8IWD4 279 aaPredicted RBP11.08□□□□□ -0.64
CALD1-210ENST00000443197 JOSD2Q8TAC2 188 aa11.08□□□□□ -0.64
CALD1-210ENST00000443197 URGCPQ8TCY9 931 aa11.08□□□□□ -0.64
CALD1-210ENST00000443197 TFAP2BQ92481 460 aa11.08□□□□□ -0.64
CALD1-210ENST00000443197 EDEM1Q92611 657 aa11.08□□□□□ -0.64
CALD1-210ENST00000443197 PRMT1Q99873 361 aaKnown RBP11.08□□□□□ -0.64
CALD1-210ENST00000443197 DDX23Q9BUQ8 820 aaKnown RBP11.08□□□□□ -0.64
CALD1-210ENST00000443197 CEP41Q9BYV8 373 aa11.08□□□□□ -0.64
CALD1-210ENST00000443197 DDIT4Q9NX09 232 aa11.08□□□□□ -0.64
CALD1-210ENST00000443197 BTNL10A8MVZ5 291 aa11.08□□□□□ -0.64
CALD1-210ENST00000443197 MBTD1Q05BQ5 628 aa11.08□□□□□ -0.64
CALD1-210ENST00000443197 B3GNT9Q6UX72 402 aa11.08□□□□□ -0.64
CALD1-210ENST00000443197 TSHZ1Q6ZSZ6 1077 aa11.08□□□□□ -0.64
CALD1-210ENST00000443197 RAPH1Q70E73 1250 aa11.08□□□□□ -0.64
CALD1-210ENST00000443197 PCGF5Q86SE9 256 aa11.08□□□□□ -0.64
CALD1-210ENST00000443197 ANKRD23Q86SG2 305 aa11.08□□□□□ -0.64
CALD1-210ENST00000443197 NETO2Q8NC67 525 aa11.08□□□□□ -0.64
CALD1-210ENST00000443197 DEPDC1BQ8WUY9 529 aa11.08□□□□□ -0.64
CALD1-210ENST00000443197 CNPY3Q9BT09 278 aa11.08□□□□□ -0.64
CALD1-210ENST00000443197 DCLK3Q9C098 648 aa11.08□□□□□ -0.64
CALD1-210ENST00000443197 KCNH4Q9UQ05 1017 aa11.08□□□□□ -0.64
CALD1-210ENST00000443197 DFFAO00273 331 aa11.08□□□□□ -0.64
CALD1-210ENST00000443197 ATP9BO43861 1147 aa11.08□□□□□ -0.64
CALD1-210ENST00000443197 C22orf31O95567 290 aa11.08□□□□□ -0.64
CALD1-210ENST00000443197 PNPLA4P41247 253 aa11.08□□□□□ -0.64
CALD1-210ENST00000443197 TPI1P60174 286 aa11.08□□□□□ -0.64
CALD1-210ENST00000443197 CENPCQ03188 943 aa11.08□□□□□ -0.64
CALD1-210ENST00000443197 NLRP14Q86W24 1093 aa11.08□□□□□ -0.64
CALD1-210ENST00000443197 C3orf20Q8ND61 904 aa11.08□□□□□ -0.64
CALD1-210ENST00000443197 RAPGEF5Q92565 580 aa11.08□□□□□ -0.64
CALD1-210ENST00000443197 VCPIP1Q96JH7 1222 aa11.08□□□□□ -0.64
CALD1-210ENST00000443197 MTG1Q9BT17 334 aaPredicted RBP11.08□□□□□ -0.64
CALD1-210ENST00000443197 B3GNT5Q9BYG0 378 aa11.08□□□□□ -0.64
CALD1-210ENST00000443197 PDZD7Q9H5P4 517 aa11.08□□□□□ -0.64
CALD1-210ENST00000443197 CDY2AQ9Y6F7 541 aa11.08□□□□□ -0.64
CALD1-210ENST00000443197 C2CD2LO14523 706 aa11.07□□□□□ -0.64
CALD1-210ENST00000443197 GPR182O15218 404 aa11.07□□□□□ -0.64
CALD1-210ENST00000443197 LSP1P33241 339 aa11.07□□□□□ -0.64
CALD1-210ENST00000443197 SCNN1GP51170 649 aa11.07□□□□□ -0.64
CALD1-210ENST00000443197 ADIGQ0VDE8 80 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms