RNA–Protein interactions for RNA: ENST00000442830.5

PTPRE-203, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 5

Gene PTPRE, Length 779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-203ENST00000442830 PPM1JQ5JR12 505 aa14.78□□□□□ -0.04
PTPRE-203ENST00000442830 FAM171BQ6P995 826 aa14.78□□□□□ -0.04
PTPRE-203ENST00000442830 SYT13Q7L8C5 426 aa14.78□□□□□ -0.04
PTPRE-203ENST00000442830 WDR49Q8IV35 697 aa14.78□□□□□ -0.04
PTPRE-203ENST00000442830 CD101Q93033 1021 aa14.78□□□□□ -0.04
PTPRE-203ENST00000442830 HPDLQ96IR7 371 aa14.78□□□□□ -0.04
PTPRE-203ENST00000442830 ZC3H10Q96K80 434 aaKnown RBP14.78□□□□□ -0.04
PTPRE-203ENST00000442830 CBWD1Q9BRT8 395 aa14.78□□□□□ -0.04
PTPRE-203ENST00000442830 PDE11AQ9HCR9 933 aa14.78□□□□□ -0.04
PTPRE-203ENST00000442830 TRPC7Q9HCX4 862 aa14.78□□□□□ -0.04
PTPRE-203ENST00000442830 GTF3C4Q9UKN8 822 aa14.78□□□□□ -0.04
PTPRE-203ENST00000442830 TULP1O00294 542 aaPredicted RBP14.77□□□□□ -0.05
PTPRE-203ENST00000442830 AXIN1O15169 862 aa14.77□□□□□ -0.05
PTPRE-203ENST00000442830 RNF40O75150 1001 aa14.77□□□□□ -0.05
PTPRE-203ENST00000442830 RHOBTB1O94844 696 aa14.77□□□□□ -0.05
PTPRE-203ENST00000442830 APBB3O95704 486 aa14.77□□□□□ -0.05
PTPRE-203ENST00000442830 SYT1P21579 422 aa14.77□□□□□ -0.05
PTPRE-203ENST00000442830 WARSP23381 471 aaKnown RBP14.77□□□□□ -0.05
PTPRE-203ENST00000442830 GJA4P35212 333 aa14.77□□□□□ -0.05
PTPRE-203ENST00000442830 CASP5P51878 434 aa14.77□□□□□ -0.05
PTPRE-203ENST00000442830 SRSF5Q13243 272 aaKnown RBP14.77□□□□□ -0.05
PTPRE-203ENST00000442830 LIMS2Q7Z4I7 341 aa14.77□□□□□ -0.05
PTPRE-203ENST00000442830 SCN4BQ8IWT1 228 aa14.77□□□□□ -0.05
PTPRE-203ENST00000442830 CXorf38Q8TB03 319 aa14.77□□□□□ -0.05
PTPRE-203ENST00000442830 NOC3LQ8WTT2 800 aaKnown RBP14.77□□□□□ -0.05
PTPRE-203ENST00000442830 CLIC6Q96NY7 704 aa14.77□□□□□ -0.05
PTPRE-203ENST00000442830 SYT15Q9BQS2 421 aa14.77□□□□□ -0.05
PTPRE-203ENST00000442830 MAGEF1Q9HAY2 307 aa14.77□□□□□ -0.05
PTPRE-203ENST00000442830 TRPM5Q9NZQ8 1165 aa14.77□□□□□ -0.05
PTPRE-203ENST00000442830 CGNQ9P2M7 1197 aaKnown RBP14.77□□□□□ -0.05
PTPRE-203ENST00000442830 EBF1Q9UH73 591 aa14.77□□□□□ -0.05
PTPRE-203ENST00000442830 SIX4Q9UIU6 781 aa14.77□□□□□ -0.05
PTPRE-203ENST00000442830 ARHGAP26Q9UNA1 814 aa14.77□□□□□ -0.05
PTPRE-203ENST00000442830 GOLGA8IPA6NC78 632 aa14.76□□□□□ -0.05
PTPRE-203ENST00000442830 GOLGA8JA6NMD2 632 aa14.76□□□□□ -0.05
PTPRE-203ENST00000442830 SLC9A3R1O14745 358 aaPredicted RBP14.76□□□□□ -0.05
PTPRE-203ENST00000442830 TADA3O75528 432 aa14.76□□□□□ -0.05
PTPRE-203ENST00000442830 PRPF6O94906 941 aaKnown RBP14.76□□□□□ -0.05
PTPRE-203ENST00000442830 EGFP01133 1207 aa14.76□□□□□ -0.05
PTPRE-203ENST00000442830 ARSAP15289 507 aa14.76□□□□□ -0.05
PTPRE-203ENST00000442830 ACAT1P24752 427 aaKnown RBP14.76□□□□□ -0.05
PTPRE-203ENST00000442830 NASPP49321 788 aaPredicted RBP14.76□□□□□ -0.05
PTPRE-203ENST00000442830 GPR15P49685 360 aa14.76□□□□□ -0.05
PTPRE-203ENST00000442830 SOWAHAQ2M3V2 549 aa14.76□□□□□ -0.05
PTPRE-203ENST00000442830 TRIM68Q6AZZ1 485 aa14.76□□□□□ -0.05
PTPRE-203ENST00000442830 CNNM4Q6P4Q7 775 aa14.76□□□□□ -0.05
PTPRE-203ENST00000442830 DENND5BQ6ZUT9 1274 aa14.76□□□□□ -0.05
PTPRE-203ENST00000442830 DDX42Q86XP3 938 aaKnown RBP eCLIP14.76□□□□□ -0.05
PTPRE-203ENST00000442830 FNBP1Q96RU3 617 aa14.76□□□□□ -0.05
PTPRE-203ENST00000442830 PCIF1Q9H4Z3 704 aa14.76□□□□□ -0.05
PTPRE-203ENST00000442830 VPS45Q9NRW7 570 aa14.76□□□□□ -0.05
PTPRE-203ENST00000442830 PPP6R2O75170 966 aa14.75□□□□□ -0.05
PTPRE-203ENST00000442830 TACC1O75410 805 aa14.75□□□□□ -0.05
PTPRE-203ENST00000442830 HDCP19113 662 aa14.75□□□□□ -0.05
PTPRE-203ENST00000442830 GRIK1P39086 918 aa14.75□□□□□ -0.05
PTPRE-203ENST00000442830 GALK1P51570 392 aa14.75□□□□□ -0.05
PTPRE-203ENST00000442830 NOP14P78316 857 aaKnown RBP14.75□□□□□ -0.05
PTPRE-203ENST00000442830 CEBPZQ03701 1054 aaKnown RBP14.75□□□□□ -0.05
PTPRE-203ENST00000442830 STK38Q15208 465 aa14.75□□□□□ -0.05
PTPRE-203ENST00000442830 EML3Q32P44 896 aa14.75□□□□□ -0.05
PTPRE-203ENST00000442830 HSF5Q4G112 596 aaPredicted RBP14.75□□□□□ -0.05
PTPRE-203ENST00000442830 HS2ST1Q7LGA3 356 aa14.75□□□□□ -0.05
PTPRE-203ENST00000442830 IQUBQ8NA54 791 aa14.75□□□□□ -0.05
PTPRE-203ENST00000442830 RPLP0P6Q8NHW5 317 aa14.75□□□□□ -0.05
PTPRE-203ENST00000442830 SH3RF2Q8TEC5 729 aa14.75□□□□□ -0.05
PTPRE-203ENST00000442830 ZNF396Q96N95 335 aaPredicted RBP14.75□□□□□ -0.05
PTPRE-203ENST00000442830 CNTNAP3BQ96NU0 1288 aa14.75□□□□□ -0.05
PTPRE-203ENST00000442830 TTLL2Q9BWV7 592 aa14.75□□□□□ -0.05
PTPRE-203ENST00000442830 CNTNAP3Q9BZ76 1288 aa14.75□□□□□ -0.05
PTPRE-203ENST00000442830 ARRDC1-AS1Q9H2J1 176 aa14.75□□□□□ -0.05
PTPRE-203ENST00000442830 IKZF4Q9H2S9 585 aa14.75□□□□□ -0.05
PTPRE-203ENST00000442830 SNX25Q9H3E2 840 aa14.75□□□□□ -0.05
PTPRE-203ENST00000442830 KBTBD4Q9NVX7 518 aa14.75□□□□□ -0.05
PTPRE-203ENST00000442830 HSPBP1Q9NZL4 362 aa14.75□□□□□ -0.05
PTPRE-203ENST00000442830 GCNT4Q9P109 453 aa14.75□□□□□ -0.05
PTPRE-203ENST00000442830 NUP205Q92621 2012 aa14.75□□□□□ -0.05
PTPRE-203ENST00000442830 ATP8B3O60423 1300 aa14.74□□□□□ -0.05
PTPRE-203ENST00000442830 OTOL1A6NHN0 477 aaPredicted RBP14.74□□□□□ -0.05
PTPRE-203ENST00000442830 WNT7BP56706 349 aa14.74□□□□□ -0.05
PTPRE-203ENST00000442830 TNNC1P63316 161 aa14.74□□□□□ -0.05
PTPRE-203ENST00000442830 DMC1Q14565 340 aa14.74□□□□□ -0.05
PTPRE-203ENST00000442830 PREPLQ4J6C6 727 aaPredicted RBP14.74□□□□□ -0.05
PTPRE-203ENST00000442830 PLA2G2CQ5R387 149 aa14.74□□□□□ -0.05
PTPRE-203ENST00000442830 SDHAF4Q5VUM1 108 aa14.74□□□□□ -0.05
PTPRE-203ENST00000442830 OSTM1Q86WC4 334 aa14.74□□□□□ -0.05
PTPRE-203ENST00000442830 ARL14EPQ8N8R7 260 aaPredicted RBP14.74□□□□□ -0.05
PTPRE-203ENST00000442830 MYCBPAPQ8TBZ2 947 aa14.74□□□□□ -0.05
PTPRE-203ENST00000442830 MYLPFQ96A32 169 aa14.74□□□□□ -0.05
PTPRE-203ENST00000442830 C8orf48Q96LL4 319 aa14.74□□□□□ -0.05
PTPRE-203ENST00000442830 SLITRK1Q96PX8 696 aa14.74□□□□□ -0.05
PTPRE-203ENST00000442830 USP28Q96RU2 1077 aa14.74□□□□□ -0.05
PTPRE-203ENST00000442830 MMS19Q96T76 1030 aa14.74□□□□□ -0.05
PTPRE-203ENST00000442830 ELOVL4Q9GZR5 314 aa14.74□□□□□ -0.05
PTPRE-203ENST00000442830 C2orf42Q9NWW7 574 aa14.74□□□□□ -0.05
PTPRE-203ENST00000442830 SPTLC2O15270 562 aa14.73□□□□□ -0.05
PTPRE-203ENST00000442830 STX6O43752 255 aa14.73□□□□□ -0.05
PTPRE-203ENST00000442830 YEATS4O95619 227 aa14.73□□□□□ -0.05
PTPRE-203ENST00000442830 STAU1O95793 577 aaKnown RBP14.73□□□□□ -0.05
PTPRE-203ENST00000442830 TNNI1P19237 187 aa14.73□□□□□ -0.05
PTPRE-203ENST00000442830 BDNFP23560 247 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms