RNA–Protein interactions for RNA: ENST00000442708.5

USP39-205, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-205ENST00000442708 BEST1O76090 585 aa17.02■□□□□ 0.32
USP39-205ENST00000442708 TPM2P07951 284 aa17.02■□□□□ 0.32
USP39-205ENST00000442708 RHOP08100 348 aa17.02■□□□□ 0.32
USP39-205ENST00000442708 PNMA6AP0CW24 399 aaPredicted RBP17.02■□□□□ 0.32
USP39-205ENST00000442708 HMGA1P17096 107 aaKnown RBP17.02■□□□□ 0.32
USP39-205ENST00000442708 PTPN2P17706 415 aa17.02■□□□□ 0.32
USP39-205ENST00000442708 SP100P23497 879 aaPredicted RBP17.02■□□□□ 0.32
USP39-205ENST00000442708 ADORA2BP29275 332 aa17.02■□□□□ 0.32
USP39-205ENST00000442708 ZNF132P52740 706 aa17.02■□□□□ 0.32
USP39-205ENST00000442708 MFAP3P55082 362 aa17.02■□□□□ 0.32
USP39-205ENST00000442708 YWHAEP62258 255 aaKnown RBP17.02■□□□□ 0.32
USP39-205ENST00000442708 UBXN1Q04323 297 aa17.02■□□□□ 0.32
USP39-205ENST00000442708 SYCP1Q15431 976 aa17.02■□□□□ 0.32
USP39-205ENST00000442708 ARHGAP44Q17R89 818 aa17.02■□□□□ 0.32
USP39-205ENST00000442708 FKBP15Q5T1M5 1219 aa17.02■□□□□ 0.32
USP39-205ENST00000442708 DNAJB7Q7Z6W7 309 aaPredicted RBP17.02■□□□□ 0.32
USP39-205ENST00000442708 TMC8Q8IU68 726 aa17.02■□□□□ 0.32
USP39-205ENST00000442708 RBBP8NLQ8NC74 664 aaPredicted RBP17.02■□□□□ 0.32
USP39-205ENST00000442708 ZMIZ2Q8NF64 920 aa17.02■□□□□ 0.32
USP39-205ENST00000442708 ITFG1Q8TB96 612 aa17.02■□□□□ 0.32
USP39-205ENST00000442708 TFAP2BQ92481 460 aa17.02■□□□□ 0.32
USP39-205ENST00000442708 PSMG2Q969U7 264 aa17.02■□□□□ 0.32
USP39-205ENST00000442708 TCEAL4Q96EI5 215 aa17.02■□□□□ 0.32
USP39-205ENST00000442708 CYFIP2Q96F07 1278 aa17.02■□□□□ 0.32
USP39-205ENST00000442708 ZNF512Q96ME7 567 aaPredicted RBP17.02■□□□□ 0.32
USP39-205ENST00000442708 NECTIN4Q96NY8 510 aa17.02■□□□□ 0.32
USP39-205ENST00000442708 KCNK16Q96T55 309 aa17.02■□□□□ 0.32
USP39-205ENST00000442708 HNRNPABQ99729 332 aaKnown RBP17.02■□□□□ 0.32
USP39-205ENST00000442708 SMOQ99835 787 aa17.02■□□□□ 0.32
USP39-205ENST00000442708 NAA15Q9BXJ9 866 aaKnown RBP17.02■□□□□ 0.32
USP39-205ENST00000442708 GPR88Q9GZN0 384 aa17.02■□□□□ 0.32
USP39-205ENST00000442708 DNAJC12Q9UKB3 198 aa17.02■□□□□ 0.32
USP39-205ENST00000442708 A0A1B0GTH6 734 aa17.01■□□□□ 0.31
USP39-205ENST00000442708 SLC38A8A6NNN8 435 aa17.01■□□□□ 0.31
USP39-205ENST00000442708 MOSPD3O75425 235 aa17.01■□□□□ 0.31
USP39-205ENST00000442708 GRIK1P39086 918 aa17.01■□□□□ 0.31
USP39-205ENST00000442708 EPHA5P54756 1037 aa17.01■□□□□ 0.31
USP39-205ENST00000442708 RPL10AP62906 217 aaKnown RBP17.01■□□□□ 0.31
USP39-205ENST00000442708 FANCCQ00597 558 aa17.01■□□□□ 0.31
USP39-205ENST00000442708 PLD1Q13393 1074 aa17.01■□□□□ 0.31
USP39-205ENST00000442708 PABPC1LQ4VXU2 614 aaKnown RBP17.01■□□□□ 0.31
USP39-205ENST00000442708 TJAP1Q5JTD0 557 aa17.01■□□□□ 0.31
USP39-205ENST00000442708 PRSS36Q5K4E3 855 aa17.01■□□□□ 0.31
USP39-205ENST00000442708 VSTM1Q6UX27 236 aa17.01■□□□□ 0.31
USP39-205ENST00000442708 RNF214Q8ND24 703 aa17.01■□□□□ 0.31
USP39-205ENST00000442708 SHC3Q92529 594 aa17.01■□□□□ 0.31
USP39-205ENST00000442708 JAKMIP2Q96AA8 810 aa17.01■□□□□ 0.31
USP39-205ENST00000442708 NECAB3Q96P71 396 aaPredicted RBP17.01■□□□□ 0.31
USP39-205ENST00000442708 ERGIC2Q96RQ1 377 aa17.01■□□□□ 0.31
USP39-205ENST00000442708 PHF7Q9BWX1 381 aaPredicted RBP17.01■□□□□ 0.31
USP39-205ENST00000442708 ACP6Q9NPH0 428 aa17.01■□□□□ 0.31
USP39-205ENST00000442708 PLCB1Q9NQ66 1216 aa17.01■□□□□ 0.31
USP39-205ENST00000442708 KRT82Q9NSB4 513 aa17.01■□□□□ 0.31
USP39-205ENST00000442708 GOLGA6L19H0YKK7 550 aa17■□□□□ 0.31
USP39-205ENST00000442708 FOXN3O00409 490 aaPredicted RBP17■□□□□ 0.31
USP39-205ENST00000442708 AP1G2O75843 785 aa17■□□□□ 0.31
USP39-205ENST00000442708 PAEPP09466 180 aa17■□□□□ 0.31
USP39-205ENST00000442708 UCHL3P15374 230 aa17■□□□□ 0.31
USP39-205ENST00000442708 GJA1P17302 382 aa17■□□□□ 0.31
USP39-205ENST00000442708 USP46P62068 366 aa17■□□□□ 0.31
USP39-205ENST00000442708 ZP2Q05996 745 aa17■□□□□ 0.31
USP39-205ENST00000442708 ARHGAP17Q68EM7 881 aa17■□□□□ 0.31
USP39-205ENST00000442708 ENOSF1Q7L5Y1 443 aa17■□□□□ 0.31
USP39-205ENST00000442708 GAS2L3Q86XJ1 694 aa17■□□□□ 0.31
USP39-205ENST00000442708 ELMOD1Q8N336 334 aa17■□□□□ 0.31
USP39-205ENST00000442708 ING5Q8WYH8 240 aa17■□□□□ 0.31
USP39-205ENST00000442708 SMARCD1Q96GM5 515 aa17■□□□□ 0.31
USP39-205ENST00000442708 SPATA17Q96L03 361 aa17■□□□□ 0.31
USP39-205ENST00000442708 C8orf48Q96LL4 319 aa17■□□□□ 0.31
USP39-205ENST00000442708 MYADMQ96S97 322 aa17■□□□□ 0.31
USP39-205ENST00000442708 IL21Q9HBE4 155 aa17■□□□□ 0.31
USP39-205ENST00000442708 CSNK1G1Q9HCP0 422 aa17■□□□□ 0.31
USP39-205ENST00000442708 FAM207AQ9NSI2 230 aaPredicted RBP17■□□□□ 0.31
USP39-205ENST00000442708 FAM50BQ9Y247 325 aa17■□□□□ 0.31
USP39-205ENST00000442708 ASB3Q9Y575 518 aa17■□□□□ 0.31
USP39-205ENST00000442708 TRIM66O15016 1216 aa16.99■□□□□ 0.31
USP39-205ENST00000442708 SERPINC1P01008 464 aa16.99■□□□□ 0.31
USP39-205ENST00000442708 VDRP11473 427 aa16.99■□□□□ 0.31
USP39-205ENST00000442708 MYL4P12829 197 aa16.99■□□□□ 0.31
USP39-205ENST00000442708 KRT5P13647 590 aa16.99■□□□□ 0.31
USP39-205ENST00000442708 CD19P15391 556 aa16.99■□□□□ 0.31
USP39-205ENST00000442708 CEBPBP17676 345 aa16.99■□□□□ 0.31
USP39-205ENST00000442708 FSHRP23945 695 aa16.99■□□□□ 0.31
USP39-205ENST00000442708 BRD2P25440 801 aaKnown RBP16.99■□□□□ 0.31
USP39-205ENST00000442708 SSTR3P32745 418 aaPredicted RBP16.99■□□□□ 0.31
USP39-205ENST00000442708 DRAP1Q14919 205 aaPredicted RBP16.99■□□□□ 0.31
USP39-205ENST00000442708 NR1I3Q14994 352 aa16.99■□□□□ 0.31
USP39-205ENST00000442708 VEPH1Q14D04 833 aa16.99■□□□□ 0.31
USP39-205ENST00000442708 CLEC20AQ6ZU45 233 aa16.99■□□□□ 0.31
USP39-205ENST00000442708 GAREM2Q75VX8 874 aa16.99■□□□□ 0.31
USP39-205ENST00000442708 TMEM150AQ86TG1 271 aa16.99■□□□□ 0.31
USP39-205ENST00000442708 TTC30AQ86WT1 665 aa16.99■□□□□ 0.31
USP39-205ENST00000442708 ADHFE1Q8IWW8 467 aa16.99■□□□□ 0.31
USP39-205ENST00000442708 SHKBP1Q8TBC3 707 aa16.99■□□□□ 0.31
USP39-205ENST00000442708 RPGRIP1Q96KN7 1286 aa16.99■□□□□ 0.31
USP39-205ENST00000442708 CD320Q9NPF0 282 aa16.99■□□□□ 0.31
USP39-205ENST00000442708 AVENQ9NQS1 362 aaPredicted RBP16.99■□□□□ 0.31
USP39-205ENST00000442708 ANAPC1Q9H1A4 1944 aa16.99■□□□□ 0.31
USP39-205ENST00000442708 ATP8B3O60423 1300 aa16.98■□□□□ 0.31
USP39-205ENST00000442708 C2CD4DB7Z1M9 353 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms