RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 CFAP221Q4G0U5 840 aa7.81□□□□□ -1.16
CDC42BPA-208ENST00000442054 C1orf220Q5T0J3 134 aa7.81□□□□□ -1.16
CDC42BPA-208ENST00000442054 ITIH5Q86UX2 942 aa7.81□□□□□ -1.16
CDC42BPA-208ENST00000442054 ZNF354CQ86Y25 554 aa7.81□□□□□ -1.16
CDC42BPA-208ENST00000442054 GJD3Q8N144 294 aa7.81□□□□□ -1.16
CDC42BPA-208ENST00000442054 SLC7A14Q8TBB6 771 aa7.81□□□□□ -1.16
CDC42BPA-208ENST00000442054 TLCD1Q96CP7 247 aa7.81□□□□□ -1.16
CDC42BPA-208ENST00000442054 HPDLQ96IR7 371 aa7.81□□□□□ -1.16
CDC42BPA-208ENST00000442054 SENP8Q96LD8 212 aa7.81□□□□□ -1.16
CDC42BPA-208ENST00000442054 PDZD7Q9H5P4 517 aa7.81□□□□□ -1.16
CDC42BPA-208ENST00000442054 CNOT8Q9UFF9 292 aaKnown RBP7.81□□□□□ -1.16
CDC42BPA-208ENST00000442054 ANKRD65E5RJM6 399 aa7.8□□□□□ -1.16
CDC42BPA-208ENST00000442054 MYO1FO00160 1098 aa7.8□□□□□ -1.16
CDC42BPA-208ENST00000442054 CAPN9O14815 690 aa7.8□□□□□ -1.16
CDC42BPA-208ENST00000442054 ZNF623O75123 536 aa7.8□□□□□ -1.16
CDC42BPA-208ENST00000442054 RPL9P32969 192 aaKnown RBP7.8□□□□□ -1.16
CDC42BPA-208ENST00000442054 CASP4P49662 377 aa7.8□□□□□ -1.16
CDC42BPA-208ENST00000442054 KPNA1P52294 538 aaPredicted RBP7.8□□□□□ -1.16
CDC42BPA-208ENST00000442054 NKX3-2P78367 333 aa7.8□□□□□ -1.16
CDC42BPA-208ENST00000442054 ZNF844Q08AG5 666 aa7.8□□□□□ -1.16
CDC42BPA-208ENST00000442054 TRIM71Q2Q1W2 868 aaKnown RBP7.8□□□□□ -1.16
CDC42BPA-208ENST00000442054 C4orf50Q6ZRC1 276 aa7.8□□□□□ -1.16
CDC42BPA-208ENST00000442054 ZNF720Q7Z2F6 126 aa7.8□□□□□ -1.16
CDC42BPA-208ENST00000442054 GPIHBP1Q8IV16 184 aa7.8□□□□□ -1.16
CDC42BPA-208ENST00000442054 TNIP3Q96KP6 325 aa7.8□□□□□ -1.16
CDC42BPA-208ENST00000442054 HEXIM2Q96MH2 286 aaKnown RBP7.8□□□□□ -1.16
CDC42BPA-208ENST00000442054 PSMB7Q99436 277 aa7.8□□□□□ -1.16
CDC42BPA-208ENST00000442054 TMEM175Q9BSA9 504 aa7.8□□□□□ -1.16
CDC42BPA-208ENST00000442054 ACBD3Q9H3P7 528 aa7.8□□□□□ -1.16
CDC42BPA-208ENST00000442054 ASB7Q9H672 318 aa7.8□□□□□ -1.16
CDC42BPA-208ENST00000442054 IFT122Q9HBG6 1241 aa7.8□□□□□ -1.16
CDC42BPA-208ENST00000442054 ASAH2Q9NR71 780 aa7.8□□□□□ -1.16
CDC42BPA-208ENST00000442054 CACNG4Q9UBN1 327 aa7.8□□□□□ -1.16
CDC42BPA-208ENST00000442054 RSPH14Q9UHP6 348 aa7.8□□□□□ -1.16
CDC42BPA-208ENST00000442054 EXTL3O43909 919 aa7.8□□□□□ -1.16
CDC42BPA-208ENST00000442054 HEXIM1O94992 359 aaKnown RBP7.8□□□□□ -1.16
CDC42BPA-208ENST00000442054 HOXB8P17481 243 aaPredicted RBP7.8□□□□□ -1.16
CDC42BPA-208ENST00000442054 LSP1P33241 339 aa7.8□□□□□ -1.16
CDC42BPA-208ENST00000442054 HSD17B3P37058 310 aa7.8□□□□□ -1.16
CDC42BPA-208ENST00000442054 GCLMP48507 274 aa7.8□□□□□ -1.16
CDC42BPA-208ENST00000442054 TUFMP49411 452 aaKnown RBP7.8□□□□□ -1.16
CDC42BPA-208ENST00000442054 CLCNKBP51801 687 aa7.8□□□□□ -1.16
CDC42BPA-208ENST00000442054 RPL10AP62906 217 aaKnown RBP7.8□□□□□ -1.16
CDC42BPA-208ENST00000442054 RAPGEF1Q13905 1077 aa7.8□□□□□ -1.16
CDC42BPA-208ENST00000442054 SNRNP35Q16560 246 aaKnown RBP7.8□□□□□ -1.16
CDC42BPA-208ENST00000442054 LEKR1Q6ZMV7 388 aa7.8□□□□□ -1.16
CDC42BPA-208ENST00000442054 AGMOQ6ZNB7 445 aa7.8□□□□□ -1.16
CDC42BPA-208ENST00000442054 TADA2BQ86TJ2 420 aa7.8□□□□□ -1.16
CDC42BPA-208ENST00000442054 CSGALNACT1Q8TDX6 532 aa7.8□□□□□ -1.16
CDC42BPA-208ENST00000442054 WHAMMQ8TF30 809 aa7.8□□□□□ -1.16
CDC42BPA-208ENST00000442054 METTL14Q9HCE5 456 aaKnown RBP7.8□□□□□ -1.16
CDC42BPA-208ENST00000442054 EPB41L5Q9HCM4 733 aa7.8□□□□□ -1.16
CDC42BPA-208ENST00000442054 NLRC4Q9NPP4 1024 aa7.8□□□□□ -1.16
CDC42BPA-208ENST00000442054 HCSTQ9UBK5 93 aa7.8□□□□□ -1.16
CDC42BPA-208ENST00000442054 ADAMTS1Q9UHI8 967 aa7.8□□□□□ -1.16
CDC42BPA-208ENST00000442054 BRWD1Q9NSI6 2320 aa7.8□□□□□ -1.16
CDC42BPA-208ENST00000442054 A0A087WUV0 522 aaPredicted RBP7.8□□□□□ -1.16
CDC42BPA-208ENST00000442054 CCDC195A0A1B0GUA6 201 aa7.8□□□□□ -1.16
CDC42BPA-208ENST00000442054 MEIS3P2A8K0S8 358 aa7.8□□□□□ -1.16
CDC42BPA-208ENST00000442054 ZNF197O14709 1029 aa7.8□□□□□ -1.16
CDC42BPA-208ENST00000442054 NR3C1P04150 777 aa7.8□□□□□ -1.16
CDC42BPA-208ENST00000442054 SSR1P43307 286 aaKnown RBP7.8□□□□□ -1.16
CDC42BPA-208ENST00000442054 NAP1L1P55209 391 aaKnown RBP7.8□□□□□ -1.16
CDC42BPA-208ENST00000442054 PUS10Q3MIT2 529 aaKnown RBP7.8□□□□□ -1.16
CDC42BPA-208ENST00000442054 SPDYCQ5MJ68 293 aa7.8□□□□□ -1.16
CDC42BPA-208ENST00000442054 PGBD3Q8N328 593 aa7.8□□□□□ -1.16
CDC42BPA-208ENST00000442054 TMEM161BQ8NDZ6 487 aa7.8□□□□□ -1.16
CDC42BPA-208ENST00000442054 SPPL3Q8TCT6 385 aa7.8□□□□□ -1.16
CDC42BPA-208ENST00000442054 FAM149B1Q96BN6 582 aa7.8□□□□□ -1.16
CDC42BPA-208ENST00000442054 MCRS1Q96EZ8 462 aa7.8□□□□□ -1.16
CDC42BPA-208ENST00000442054 ALS2CR12Q96Q35 445 aa7.8□□□□□ -1.16
CDC42BPA-208ENST00000442054 CBWD1Q9BRT8 395 aa7.8□□□□□ -1.16
CDC42BPA-208ENST00000442054 EPN3Q9H201 632 aa7.8□□□□□ -1.16
CDC42BPA-208ENST00000442054 FZD8Q9H461 694 aa7.8□□□□□ -1.16
CDC42BPA-208ENST00000442054 GOLPH3Q9H4A6 298 aa7.8□□□□□ -1.16
CDC42BPA-208ENST00000442054 MAN1C1Q9NR34 630 aa7.8□□□□□ -1.16
CDC42BPA-208ENST00000442054 DZANK1Q9NVP4 752 aa7.8□□□□□ -1.16
CDC42BPA-208ENST00000442054 FAM169AQ9Y6X4 670 aa7.8□□□□□ -1.16
CDC42BPA-208ENST00000442054 IPO7O95373 1038 aaKnown RBP7.79□□□□□ -1.16
CDC42BPA-208ENST00000442054 MAPK7Q13164 816 aa7.79□□□□□ -1.16
CDC42BPA-208ENST00000442054 SWT1Q5T5J6 900 aaKnown RBP7.79□□□□□ -1.16
CDC42BPA-208ENST00000442054 UBAP2Q5T6F2 1119 aaKnown RBP7.79□□□□□ -1.16
CDC42BPA-208ENST00000442054 INTS8Q75QN2 995 aaKnown RBP7.79□□□□□ -1.16
CDC42BPA-208ENST00000442054 RNF139Q8WU17 664 aa7.79□□□□□ -1.16
CDC42BPA-208ENST00000442054 CD101Q93033 1021 aa7.79□□□□□ -1.16
CDC42BPA-208ENST00000442054 ATP6V1G3Q96LB4 118 aa7.79□□□□□ -1.16
CDC42BPA-208ENST00000442054 FBXL18Q96ME1 805 aa7.79□□□□□ -1.16
CDC42BPA-208ENST00000442054 NECTIN4Q96NY8 510 aa7.79□□□□□ -1.16
CDC42BPA-208ENST00000442054 SLITRK1Q96PX8 696 aa7.79□□□□□ -1.16
CDC42BPA-208ENST00000442054 CDCA3Q99618 268 aaPredicted RBP7.79□□□□□ -1.16
CDC42BPA-208ENST00000442054 BRD9Q9H8M2 597 aa7.79□□□□□ -1.16
CDC42BPA-208ENST00000442054 WDR70Q9NW82 654 aa7.79□□□□□ -1.16
CDC42BPA-208ENST00000442054 ANKRD62A6NC57 917 aa7.79□□□□□ -1.16
CDC42BPA-208ENST00000442054 PPFIA2O75334 1257 aa7.79□□□□□ -1.16
CDC42BPA-208ENST00000442054 SOD2P04179 222 aa7.79□□□□□ -1.16
CDC42BPA-208ENST00000442054 ADCY1Q08828 1119 aa7.79□□□□□ -1.16
CDC42BPA-208ENST00000442054 PLD1Q13393 1074 aa7.79□□□□□ -1.16
CDC42BPA-208ENST00000442054 SIX1Q15475 284 aaPredicted RBP7.79□□□□□ -1.16
CDC42BPA-208ENST00000442054 ARHGAP44Q17R89 818 aa7.79□□□□□ -1.16
CDC42BPA-208ENST00000442054 SLC39A12Q504Y0 691 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms