RNA–Protein interactions for RNA: ENST00000441915.5

SEMA3B-207, Transcript of semaphorin 3B, humanhuman

TSL 1 (best)

Gene SEMA3B, Length 2,710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-207ENST00000441915 EFTUD2Q15029 972 aaKnown RBP eCLIP17.3■□□□□ 0.362e-7■■■□□ 16.2
SEMA3B-207ENST00000441915 MAPK6Q16659 721 aa17.3■□□□□ 0.36
SEMA3B-207ENST00000441915 NAIF1Q69YI7 327 aaPredicted RBP17.3■□□□□ 0.36
SEMA3B-207ENST00000441915 DENND1BQ6P3S1 775 aa17.3■□□□□ 0.36
SEMA3B-207ENST00000441915 JOSD2Q8TAC2 188 aa17.3■□□□□ 0.36
SEMA3B-207ENST00000441915 ALKBH8Q96BT7 664 aaKnown RBP17.3■□□□□ 0.36
SEMA3B-207ENST00000441915 MED7O43513 233 aa17.29■□□□□ 0.36
SEMA3B-207ENST00000441915 ADRA1DP25100 572 aa17.29■□□□□ 0.36
SEMA3B-207ENST00000441915 PSMC1P62191 440 aaKnown RBP17.29■□□□□ 0.36
SEMA3B-207ENST00000441915 SPDYAQ5MJ70 313 aa17.29■□□□□ 0.36
SEMA3B-207ENST00000441915 ZNF772Q68DY9 489 aaPredicted RBP17.29■□□□□ 0.36
SEMA3B-207ENST00000441915 ZNF449Q6P9G9 518 aa17.29■□□□□ 0.36
SEMA3B-207ENST00000441915 ZBTB8OSQ8IWT0 167 aa17.29■□□□□ 0.36
SEMA3B-207ENST00000441915 ARFGAP1Q8N6T3 406 aa17.29■□□□□ 0.36
SEMA3B-207ENST00000441915 MAB21L3Q8N8X9 362 aa17.29■□□□□ 0.36
SEMA3B-207ENST00000441915 LHX5Q9H2C1 402 aa17.29■□□□□ 0.36
SEMA3B-207ENST00000441915 SYNCQ9H7C4 482 aa17.29■□□□□ 0.36
SEMA3B-207ENST00000441915 NXF1Q9UBU9 619 aaKnown RBP17.29■□□□□ 0.36
SEMA3B-207ENST00000441915 ZMYND8Q9ULU4 1186 aaPredicted RBP17.29■□□□□ 0.36
SEMA3B-207ENST00000441915 FZD1Q9UP38 647 aa17.29■□□□□ 0.36
SEMA3B-207ENST00000441915 C2CD2LO14523 706 aa17.29■□□□□ 0.36
SEMA3B-207ENST00000441915 TM9SF1O15321 606 aa17.29■□□□□ 0.36
SEMA3B-207ENST00000441915 PRKCBP05771 671 aa17.29■□□□□ 0.36
SEMA3B-207ENST00000441915 TROVE2P10155 538 aaKnown RBP eCLIP17.29■□□□□ 0.36
SEMA3B-207ENST00000441915 FGFR1P11362 822 aa17.29■□□□□ 0.36
SEMA3B-207ENST00000441915 SLC45A4Q5BKX6 768 aa17.29■□□□□ 0.36
SEMA3B-207ENST00000441915 IER5Q5VY09 327 aa17.29■□□□□ 0.36
SEMA3B-207ENST00000441915 CCDC125Q86Z20 511 aa17.29■□□□□ 0.36
SEMA3B-207ENST00000441915 TAB3Q8N5C8 712 aaPredicted RBP17.29■□□□□ 0.36
SEMA3B-207ENST00000441915 KCTD6Q8NC69 237 aa17.29■□□□□ 0.36
SEMA3B-207ENST00000441915 TCP10LQ8TDR4 215 aa17.29■□□□□ 0.36
SEMA3B-207ENST00000441915 DHRS4Q9BTZ2 278 aa17.29■□□□□ 0.36
SEMA3B-207ENST00000441915 XYLT2Q9H1B5 865 aa17.29■□□□□ 0.36
SEMA3B-207ENST00000441915 CYLDQ9NQC7 956 aa17.29■□□□□ 0.36
SEMA3B-207ENST00000441915 PIAS1O75925 651 aa17.28■□□□□ 0.36
SEMA3B-207ENST00000441915 TNNC2P02585 160 aa17.28■□□□□ 0.36
SEMA3B-207ENST00000441915 EN1Q05925 392 aaPredicted RBP17.28■□□□□ 0.36
SEMA3B-207ENST00000441915 NBPF20Q3BBV1 942 aa17.28■□□□□ 0.36
SEMA3B-207ENST00000441915 BBS9Q3SYG4 887 aa17.28■□□□□ 0.36
SEMA3B-207ENST00000441915 NLRP9Q7RTR0 991 aa17.28■□□□□ 0.36
SEMA3B-207ENST00000441915 KIAA0319LQ8IZA0 1049 aa17.28■□□□□ 0.36
SEMA3B-207ENST00000441915 RNF149Q8NC42 400 aa17.28■□□□□ 0.36
SEMA3B-207ENST00000441915 CHST13Q8NET6 341 aa17.28■□□□□ 0.36
SEMA3B-207ENST00000441915 ZNF398Q8TD17 642 aa17.28■□□□□ 0.36
SEMA3B-207ENST00000441915 ANKRD36BP1Q96IX9 119 aa17.28■□□□□ 0.36
SEMA3B-207ENST00000441915 NPHS2Q9NP85 383 aa17.28■□□□□ 0.36
SEMA3B-207ENST00000441915 BATF3Q9NR55 127 aa17.28■□□□□ 0.36
SEMA3B-207ENST00000441915 WDR35Q9P2L0 1181 aa17.28■□□□□ 0.36
SEMA3B-207ENST00000441915 TJP2Q9UDY2 1190 aa17.28■□□□□ 0.36
SEMA3B-207ENST00000441915 XPO7Q9UIA9 1087 aaKnown RBP17.28■□□□□ 0.36
SEMA3B-207ENST00000441915 ZFP69BQ9UJL9 534 aa17.28■□□□□ 0.36
SEMA3B-207ENST00000441915 TNS1Q9HBL0 1735 aaKnown RBP17.28■□□□□ 0.36
SEMA3B-207ENST00000441915 WDR91A4D1P6 747 aa17.28■□□□□ 0.36
SEMA3B-207ENST00000441915 HOXC6P09630 235 aa17.28■□□□□ 0.36
SEMA3B-207ENST00000441915 T-ENOLP0DO92 83 aa17.28■□□□□ 0.36
SEMA3B-207ENST00000441915 BASP1P80723 227 aaKnown RBP17.28■□□□□ 0.36
SEMA3B-207ENST00000441915 TAZQ16635 292 aa17.28■□□□□ 0.36
SEMA3B-207ENST00000441915 TAF1BQ53T94 588 aaPredicted RBP17.28■□□□□ 0.36
SEMA3B-207ENST00000441915 RFX6Q8HWS3 928 aa17.28■□□□□ 0.36
SEMA3B-207ENST00000441915 EMC1Q8N766 993 aa17.28■□□□□ 0.36
SEMA3B-207ENST00000441915 SLC7A6OSQ96CW6 309 aaPredicted RBP17.28■□□□□ 0.36
SEMA3B-207ENST00000441915 APOC4-APOC2K7ER74 178 aa17.27■□□□□ 0.36
SEMA3B-207ENST00000441915 MCF2LO15068 1137 aa17.27■□□□□ 0.36
SEMA3B-207ENST00000441915 ECM2O94769 699 aaPredicted RBP17.27■□□□□ 0.36
SEMA3B-207ENST00000441915 APOC2P02655 101 aa17.27■□□□□ 0.36
SEMA3B-207ENST00000441915 CD48P09326 243 aa17.27■□□□□ 0.36
SEMA3B-207ENST00000441915 TCF7P36402 384 aaPredicted RBP17.27■□□□□ 0.36
SEMA3B-207ENST00000441915 LAMTOR4Q0VGL1 99 aa17.27■□□□□ 0.36
SEMA3B-207ENST00000441915 MTM1Q13496 603 aa17.27■□□□□ 0.36
SEMA3B-207ENST00000441915 MXD4Q14582 209 aaPredicted RBP17.27■□□□□ 0.36
SEMA3B-207ENST00000441915 ANKRD20A2Q5SQ80 823 aa17.27■□□□□ 0.36
SEMA3B-207ENST00000441915 ANKRD20A1Q5TYW2 823 aa17.27■□□□□ 0.36
SEMA3B-207ENST00000441915 ANKRD20A3Q5VUR7 823 aa17.27■□□□□ 0.36
SEMA3B-207ENST00000441915 PRAMEF18Q5VWM3 479 aa17.27■□□□□ 0.36
SEMA3B-207ENST00000441915 CDCA2Q69YH5 1023 aaPredicted RBP17.27■□□□□ 0.36
SEMA3B-207ENST00000441915 SMYD5Q6GMV2 418 aa17.27■□□□□ 0.36
SEMA3B-207ENST00000441915 UNC45BQ8IWX7 931 aa17.27■□□□□ 0.36
SEMA3B-207ENST00000441915 TBC1D10AQ9BXI6 508 aa17.27■□□□□ 0.36
SEMA3B-207ENST00000441915 VPS11Q9H270 941 aa17.27■□□□□ 0.36
SEMA3B-207ENST00000441915 METTL5Q9NRN9 209 aaKnown RBP17.27■□□□□ 0.36
SEMA3B-207ENST00000441915 PIM2Q9P1W9 311 aa17.27■□□□□ 0.36
SEMA3B-207ENST00000441915 PCSK1NQ9UHG2 260 aa17.27■□□□□ 0.36
SEMA3B-207ENST00000441915 CYTH4Q9UIA0 394 aa17.27■□□□□ 0.36
SEMA3B-207ENST00000441915 LCTP09848 1927 aa17.27■□□□□ 0.36
SEMA3B-207ENST00000441915 TCRBV7S3A2A0A539 114 aa17.27■□□□□ 0.36
SEMA3B-207ENST00000441915 GOLGA8RI6L899 631 aa17.27■□□□□ 0.36
SEMA3B-207ENST00000441915 RNF8O76064 485 aa17.27■□□□□ 0.36
SEMA3B-207ENST00000441915 TMEM63AO94886 807 aa17.27■□□□□ 0.36
SEMA3B-207ENST00000441915 CBX6O95503 412 aa17.27■□□□□ 0.36
SEMA3B-207ENST00000441915 EIF3EP60228 445 aaKnown RBP17.27■□□□□ 0.36
SEMA3B-207ENST00000441915 BIRC2Q13490 618 aa17.27■□□□□ 0.36
SEMA3B-207ENST00000441915 FAM71DQ8N9W8 422 aa17.27■□□□□ 0.36
SEMA3B-207ENST00000441915 MZB1Q8WU39 189 aa17.27■□□□□ 0.36
SEMA3B-207ENST00000441915 DCAKDQ8WVC6 231 aa17.27■□□□□ 0.36
SEMA3B-207ENST00000441915 SEPT1Q8WYJ6 367 aa17.27■□□□□ 0.36
SEMA3B-207ENST00000441915 CPXM1Q96SM3 734 aa17.27■□□□□ 0.36
SEMA3B-207ENST00000441915 CYTH2Q99418 400 aa17.27■□□□□ 0.36
SEMA3B-207ENST00000441915 WDR83Q9BRX9 315 aaKnown RBP17.27■□□□□ 0.36
SEMA3B-207ENST00000441915 KRT19P08727 400 aa17.27■□□□□ 0.35
SEMA3B-207ENST00000441915 RBP3P10745 1247 aa17.27■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms