RNA–Protein interactions for RNA: ENST00000441756.1

MCF2L-217, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 370 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-217ENST00000441756 BACE2Q9Y5Z0 518 aa16.8■□□□□ 0.28
MCF2L-217ENST00000441756 KIAA1671Q9BY89 1806 aa16.8■□□□□ 0.28
MCF2L-217ENST00000441756 AP1G2O75843 785 aa16.79■□□□□ 0.28
MCF2L-217ENST00000441756 FGF18O76093 207 aa16.79■□□□□ 0.28
MCF2L-217ENST00000441756 PLA2G4AP47712 749 aa16.79■□□□□ 0.28
MCF2L-217ENST00000441756 GABRB2P47870 512 aa16.79■□□□□ 0.28
MCF2L-217ENST00000441756 GNG11P61952 73 aa16.79■□□□□ 0.28
MCF2L-217ENST00000441756 ETF1P62495 437 aaKnown RBP16.79■□□□□ 0.28
MCF2L-217ENST00000441756 PSMD5Q16401 504 aa16.79■□□□□ 0.28
MCF2L-217ENST00000441756 PTPN20Q4JDL3 420 aa16.79■□□□□ 0.28
MCF2L-217ENST00000441756 SLC39A12Q504Y0 691 aa16.79■□□□□ 0.28
MCF2L-217ENST00000441756 RTP2Q5QGT7 225 aa16.79■□□□□ 0.28
MCF2L-217ENST00000441756 KIAA0319Q5VV43 1072 aa16.79■□□□□ 0.28
MCF2L-217ENST00000441756 DNAJC24Q6P3W2 148 aa16.79■□□□□ 0.28
MCF2L-217ENST00000441756 ZDHHC17Q8IUH5 632 aa16.79■□□□□ 0.28
MCF2L-217ENST00000441756 SYCE1Q8N0S2 351 aa16.79■□□□□ 0.28
MCF2L-217ENST00000441756 WDTC1Q8N5D0 677 aa16.79■□□□□ 0.28
MCF2L-217ENST00000441756 SLC35F5Q8WV83 523 aa16.79■□□□□ 0.28
MCF2L-217ENST00000441756 RIN2Q8WYP3 895 aaPredicted RBP16.79■□□□□ 0.28
MCF2L-217ENST00000441756 HSFY1Q96LI6 401 aa16.79■□□□□ 0.28
MCF2L-217ENST00000441756 UBE2OQ9C0C9 1292 aaKnown RBP16.79■□□□□ 0.28
MCF2L-217ENST00000441756 ABCB6Q9NP58 842 aa16.79■□□□□ 0.28
MCF2L-217ENST00000441756 DMAP1Q9NPF5 467 aaPredicted RBP16.79■□□□□ 0.28
MCF2L-217ENST00000441756 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.79■□□□□ 0.28
MCF2L-217ENST00000441756 CHST7Q9NS84 486 aa16.79■□□□□ 0.28
MCF2L-217ENST00000441756 TRIM10Q9UDY6 481 aa16.79■□□□□ 0.28
MCF2L-217ENST00000441756 TFR2Q9UP52 801 aa16.79■□□□□ 0.28
MCF2L-217ENST00000441756 PCDHB5Q9Y5E4 795 aa16.79■□□□□ 0.28
MCF2L-217ENST00000441756 A0A0U1RQJ8 604 aa16.78■□□□□ 0.28
MCF2L-217ENST00000441756 MTA2O94776 668 aa16.78■□□□□ 0.28
MCF2L-217ENST00000441756 CTNNB1P35222 781 aa16.78■□□□□ 0.28
MCF2L-217ENST00000441756 DSG1Q02413 1049 aa16.78■□□□□ 0.28
MCF2L-217ENST00000441756 PTP4A2Q12974 167 aa16.78■□□□□ 0.28
MCF2L-217ENST00000441756 ZNF268Q14587 947 aaPredicted RBP16.78■□□□□ 0.28
MCF2L-217ENST00000441756 CFAP221Q4G0U5 840 aa16.78■□□□□ 0.28
MCF2L-217ENST00000441756 DNTTIP2Q5QJE6 756 aaKnown RBP16.78■□□□□ 0.28
MCF2L-217ENST00000441756 VSTM1Q6UX27 236 aa16.78■□□□□ 0.28
MCF2L-217ENST00000441756 C3orf20Q8ND61 904 aa16.78■□□□□ 0.28
MCF2L-217ENST00000441756 SLC35G2Q8TBE7 412 aa16.78■□□□□ 0.28
MCF2L-217ENST00000441756 ZNF564Q8TBZ8 553 aaPredicted RBP16.78■□□□□ 0.28
MCF2L-217ENST00000441756 SPPL2BQ8TCT7 592 aa16.78■□□□□ 0.28
MCF2L-217ENST00000441756 UBE2Q2Q8WVN8 375 aa16.78■□□□□ 0.28
MCF2L-217ENST00000441756 ATRIPQ8WXE1 791 aa16.78■□□□□ 0.28
MCF2L-217ENST00000441756 ARHGEF26Q96DR7 871 aa16.78■□□□□ 0.28
MCF2L-217ENST00000441756 CPXM1Q96SM3 734 aa16.78■□□□□ 0.28
MCF2L-217ENST00000441756 LPIN3Q9BQK8 851 aa16.78■□□□□ 0.28
MCF2L-217ENST00000441756 NUP85Q9BW27 656 aa16.78■□□□□ 0.28
MCF2L-217ENST00000441756 SLC4A5Q9BY07 1137 aa16.78■□□□□ 0.28
MCF2L-217ENST00000441756 UBXN6Q9BZV1 441 aa16.78■□□□□ 0.28
MCF2L-217ENST00000441756 PNPLA8Q9NP80 782 aa16.78■□□□□ 0.28
MCF2L-217ENST00000441756 LZTS1Q9Y250 596 aa16.78■□□□□ 0.28
MCF2L-217ENST00000441756 PCDHA11Q9Y5I1 949 aa16.78■□□□□ 0.28
MCF2L-217ENST00000441756 DUSP10Q9Y6W6 482 aa16.78■□□□□ 0.28
MCF2L-217ENST00000441756 VWA8A3KMH1 1905 aa16.78■□□□□ 0.28
MCF2L-217ENST00000441756 CLDN5O00501 218 aa16.77■□□□□ 0.28
MCF2L-217ENST00000441756 SART1O43290 800 aaKnown RBP16.77■□□□□ 0.28
MCF2L-217ENST00000441756 MOCS3O95396 460 aa16.77■□□□□ 0.28
MCF2L-217ENST00000441756 TNNT1P13805 278 aa16.77■□□□□ 0.28
MCF2L-217ENST00000441756 RRM1P23921 792 aa16.77■□□□□ 0.28
MCF2L-217ENST00000441756 BMPR1AP36894 532 aa16.77■□□□□ 0.28
MCF2L-217ENST00000441756 UBE3AQ05086 875 aa16.77■□□□□ 0.28
MCF2L-217ENST00000441756 GPR17Q13304 367 aa16.77■□□□□ 0.28
MCF2L-217ENST00000441756 SHHQ15465 462 aa16.77■□□□□ 0.28
MCF2L-217ENST00000441756 ZNF569Q5MCW4 686 aa16.77■□□□□ 0.28
MCF2L-217ENST00000441756 C9orf50Q5SZB4 431 aa16.77■□□□□ 0.28
MCF2L-217ENST00000441756 PLEKHA7Q6IQ23 1121 aa16.77■□□□□ 0.28
MCF2L-217ENST00000441756 SLC8B1Q6J4K2 584 aa16.77■□□□□ 0.28
MCF2L-217ENST00000441756 CLEC20AQ6ZU45 233 aa16.77■□□□□ 0.28
MCF2L-217ENST00000441756 PAQR9Q6ZVX9 377 aa16.77■□□□□ 0.28
MCF2L-217ENST00000441756 DNAAF5Q86Y56 855 aa16.77■□□□□ 0.28
MCF2L-217ENST00000441756 VPS52Q8N1B4 723 aa16.77■□□□□ 0.28
MCF2L-217ENST00000441756 FBXO22Q8NEZ5 403 aa16.77■□□□□ 0.28
MCF2L-217ENST00000441756 KCTD13Q8WZ19 329 aa16.77■□□□□ 0.28
MCF2L-217ENST00000441756 B3GALT6Q96L58 329 aa16.77■□□□□ 0.28
MCF2L-217ENST00000441756 TMEM209Q96SK2 561 aa16.77■□□□□ 0.28
MCF2L-217ENST00000441756 SELENOOQ9BVL4 669 aa16.77■□□□□ 0.28
MCF2L-217ENST00000441756 LRRC4Q9HBW1 653 aa16.77■□□□□ 0.28
MCF2L-217ENST00000441756 CSNK1G1Q9HCP0 422 aa16.77■□□□□ 0.28
MCF2L-217ENST00000441756 MRPL17Q9NRX2 175 aaKnown RBP16.77■□□□□ 0.28
MCF2L-217ENST00000441756 CYTH4Q9UIA0 394 aa16.77■□□□□ 0.28
MCF2L-217ENST00000441756 PAXBP1Q9Y5B6 917 aa16.77■□□□□ 0.28
MCF2L-217ENST00000441756 LINC01553A4QN01 128 aa16.76■□□□□ 0.27
MCF2L-217ENST00000441756 TRIM66O15016 1216 aa16.76■□□□□ 0.27
MCF2L-217ENST00000441756 ATMINO43313 823 aaPredicted RBP16.76■□□□□ 0.27
MCF2L-217ENST00000441756 BUB1O43683 1085 aa16.76■□□□□ 0.27
MCF2L-217ENST00000441756 TBC1D4O60343 1298 aa16.76■□□□□ 0.27
MCF2L-217ENST00000441756 FBXO21O94952 628 aa16.76■□□□□ 0.27
MCF2L-217ENST00000441756 ERBB2P04626 1255 aa16.76■□□□□ 0.27
MCF2L-217ENST00000441756 RB1P06400 928 aa16.76■□□□□ 0.27
MCF2L-217ENST00000441756 DESP17661 470 aa16.76■□□□□ 0.27
MCF2L-217ENST00000441756 SCNN1AP37088 669 aa16.76■□□□□ 0.27
MCF2L-217ENST00000441756 MAGEA11P43364 429 aa16.76■□□□□ 0.27
MCF2L-217ENST00000441756 RPL34P49207 117 aaKnown RBP16.76■□□□□ 0.27
MCF2L-217ENST00000441756 MAP3K7CLP57077 242 aa16.76■□□□□ 0.27
MCF2L-217ENST00000441756 PMF1Q6P1K2 205 aa16.76■□□□□ 0.27
MCF2L-217ENST00000441756 PRSS55Q6UWB4 352 aaPredicted RBP16.76■□□□□ 0.27
MCF2L-217ENST00000441756 TAS1R1Q7RTX1 841 aa16.76■□□□□ 0.27
MCF2L-217ENST00000441756 TMEM110Q86TL2 294 aa16.76■□□□□ 0.27
MCF2L-217ENST00000441756 PIGZQ86VD9 579 aa16.76■□□□□ 0.27
MCF2L-217ENST00000441756 LRRTM3Q86VH5 581 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms