RNA–Protein interactions for RNA: ENST00000441725.1

CDC42BPA-207, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-207ENST00000441725 ANKEF1Q9NU02 776 aa4.6□□□□□ -1.67
CDC42BPA-207ENST00000441725 CWC25Q9NXE8 425 aaPredicted RBP4.6□□□□□ -1.67
CDC42BPA-207ENST00000441725 ORC3Q9UBD5 711 aaPredicted RBP4.6□□□□□ -1.67
CDC42BPA-207ENST00000441725 GPR34Q9UPC5 381 aa4.6□□□□□ -1.67
CDC42BPA-207ENST00000441725 F5H0A9 414 aaPredicted RBP4.59□□□□□ -1.67
CDC42BPA-207ENST00000441725 CCP110O43303 1012 aa4.59□□□□□ -1.67
CDC42BPA-207ENST00000441725 ZBED4O75132 1171 aa4.59□□□□□ -1.67
CDC42BPA-207ENST00000441725 ADAMTS4O75173 837 aa4.59□□□□□ -1.67
CDC42BPA-207ENST00000441725 COQ9O75208 318 aa4.59□□□□□ -1.67
CDC42BPA-207ENST00000441725 CYP7B1O75881 506 aa4.59□□□□□ -1.67
CDC42BPA-207ENST00000441725 KRT38O76015 456 aa4.59□□□□□ -1.67
CDC42BPA-207ENST00000441725 AGFG2O95081 481 aa4.59□□□□□ -1.67
CDC42BPA-207ENST00000441725 ZNF888P0CJ79 500 aaPredicted RBP4.59□□□□□ -1.67
CDC42BPA-207ENST00000441725 FDXRP22570 491 aa4.59□□□□□ -1.67
CDC42BPA-207ENST00000441725 IGFBP6P24592 240 aaPredicted RBP4.59□□□□□ -1.67
CDC42BPA-207ENST00000441725 AKT1P31749 480 aa4.59□□□□□ -1.67
CDC42BPA-207ENST00000441725 ATXN1P54253 815 aaKnown RBP4.59□□□□□ -1.67
CDC42BPA-207ENST00000441725 CCNG2Q16589 344 aa4.59□□□□□ -1.67
CDC42BPA-207ENST00000441725 TBR1Q16650 682 aa4.59□□□□□ -1.67
CDC42BPA-207ENST00000441725 TBC1D10BQ4KMP7 808 aaPredicted RBP4.59□□□□□ -1.67
CDC42BPA-207ENST00000441725 VWA3BQ502W6 1294 aa4.59□□□□□ -1.67
CDC42BPA-207ENST00000441725 FAM160B1Q5W0V3 765 aa4.59□□□□□ -1.67
CDC42BPA-207ENST00000441725 KRT77Q7Z794 578 aa4.59□□□□□ -1.67
CDC42BPA-207ENST00000441725 GAS2L3Q86XJ1 694 aa4.59□□□□□ -1.67
CDC42BPA-207ENST00000441725 ZNF280BQ86YH2 543 aa4.59□□□□□ -1.67
CDC42BPA-207ENST00000441725 AGBL5Q8NDL9 886 aa4.59□□□□□ -1.67
CDC42BPA-207ENST00000441725 FLAD1Q8NFF5 587 aa4.59□□□□□ -1.67
CDC42BPA-207ENST00000441725 NELL1Q92832 810 aa4.59□□□□□ -1.67
CDC42BPA-207ENST00000441725 SDF4Q9BRK5 362 aa4.59□□□□□ -1.67
CDC42BPA-207ENST00000441725 RNPEPQ9H4A4 650 aa4.59□□□□□ -1.67
CDC42BPA-207ENST00000441725 HELLSQ9NRZ9 838 aa4.59□□□□□ -1.67
CDC42BPA-207ENST00000441725 DNMT3BQ9UBC3 853 aaKnown RBP4.59□□□□□ -1.67
CDC42BPA-207ENST00000441725 CA14Q9ULX7 337 aa4.59□□□□□ -1.67
CDC42BPA-207ENST00000441725 AHCYL1O43865 530 aa4.58□□□□□ -1.68
CDC42BPA-207ENST00000441725 VPS4BO75351 444 aa4.58□□□□□ -1.68
CDC42BPA-207ENST00000441725 ANXA6P08133 673 aa4.58□□□□□ -1.68
CDC42BPA-207ENST00000441725 SNRPA1P09661 255 aaKnown RBP4.58□□□□□ -1.68
CDC42BPA-207ENST00000441725 SRGAP2BP0DMP2 458 aa4.58□□□□□ -1.68
CDC42BPA-207ENST00000441725 RPS6KB1P23443 525 aa4.58□□□□□ -1.68
CDC42BPA-207ENST00000441725 VIPR2P41587 438 aa4.58□□□□□ -1.68
CDC42BPA-207ENST00000441725 CDR1P51861 262 aa4.58□□□□□ -1.68
CDC42BPA-207ENST00000441725 BOP1Q14137 746 aaKnown RBP4.58□□□□□ -1.68
CDC42BPA-207ENST00000441725 GRM4Q14833 912 aa4.58□□□□□ -1.68
CDC42BPA-207ENST00000441725 TSTQ16762 297 aaKnown RBP4.58□□□□□ -1.68
CDC42BPA-207ENST00000441725 ATPAF1Q5TC12 328 aaPredicted RBP4.58□□□□□ -1.68
CDC42BPA-207ENST00000441725 TSHZ3Q63HK5 1081 aa4.58□□□□□ -1.68
CDC42BPA-207ENST00000441725 ACAD10Q6JQN1 1059 aa4.58□□□□□ -1.68
CDC42BPA-207ENST00000441725 BBS12Q6ZW61 710 aa4.58□□□□□ -1.68
CDC42BPA-207ENST00000441725 RASGRP3Q8IV61 690 aa4.58□□□□□ -1.68
CDC42BPA-207ENST00000441725 HSCBQ8IWL3 235 aa4.58□□□□□ -1.68
CDC42BPA-207ENST00000441725 CMTM4Q8IZR5 234 aa4.58□□□□□ -1.68
CDC42BPA-207ENST00000441725 TMEM57Q8N5G2 664 aa4.58□□□□□ -1.68
CDC42BPA-207ENST00000441725 AOPEPQ8N6M6 819 aa4.58□□□□□ -1.68
CDC42BPA-207ENST00000441725 OR14K1Q8NGZ2 314 aa4.58□□□□□ -1.68
CDC42BPA-207ENST00000441725 GOLGA1Q92805 767 aa4.58□□□□□ -1.68
CDC42BPA-207ENST00000441725 LPPQ93052 612 aa4.58□□□□□ -1.68
CDC42BPA-207ENST00000441725 SDCCAG3Q96C92 435 aa4.58□□□□□ -1.68
CDC42BPA-207ENST00000441725 BORCS6Q96GS4 357 aa4.58□□□□□ -1.68
CDC42BPA-207ENST00000441725 C7orf26Q96N11 449 aa4.58□□□□□ -1.68
CDC42BPA-207ENST00000441725 KLHL32Q96NJ5 620 aa4.58□□□□□ -1.68
CDC42BPA-207ENST00000441725 MED15Q96RN5 788 aa4.58□□□□□ -1.68
CDC42BPA-207ENST00000441725 GPHA2Q96T91 129 aa4.58□□□□□ -1.68
CDC42BPA-207ENST00000441725 IMPG2Q9BZV3 1241 aa4.58□□□□□ -1.68
CDC42BPA-207ENST00000441725 TTYH3Q9C0H2 523 aa4.58□□□□□ -1.68
CDC42BPA-207ENST00000441725 OR10A2Q9H208 303 aa4.58□□□□□ -1.68
CDC42BPA-207ENST00000441725 VPS16Q9H269 839 aa4.58□□□□□ -1.68
CDC42BPA-207ENST00000441725 SLC6A15Q9H2J7 730 aa4.58□□□□□ -1.68
CDC42BPA-207ENST00000441725 CXorf56Q9H5V9 222 aa4.58□□□□□ -1.68
CDC42BPA-207ENST00000441725 RETREG1Q9H6L5 497 aa4.58□□□□□ -1.68
CDC42BPA-207ENST00000441725 ELAC1Q9H777 363 aaKnown RBP4.58□□□□□ -1.68
CDC42BPA-207ENST00000441725 HPSEQ9Y251 543 aa4.58□□□□□ -1.68
CDC42BPA-207ENST00000441725 LMTK3Q96Q04 1460 aa4.58□□□□□ -1.68
CDC42BPA-207ENST00000441725 SYNRGQ9UMZ2 1314 aa4.58□□□□□ -1.68
CDC42BPA-207ENST00000441725 CCDC196A0A1B0GTZ2 297 aa4.58□□□□□ -1.68
CDC42BPA-207ENST00000441725 DOK2O60496 412 aa4.58□□□□□ -1.68
CDC42BPA-207ENST00000441725 AMHP03971 560 aa4.58□□□□□ -1.68
CDC42BPA-207ENST00000441725 ZNF28P17035 718 aa4.58□□□□□ -1.68
CDC42BPA-207ENST00000441725 PFKLP17858 780 aa4.58□□□□□ -1.68
CDC42BPA-207ENST00000441725 HOXD12P35452 270 aa4.58□□□□□ -1.68
CDC42BPA-207ENST00000441725 LIMS1P48059 325 aa4.58□□□□□ -1.68
CDC42BPA-207ENST00000441725 WNT3P56703 355 aa4.58□□□□□ -1.68
CDC42BPA-207ENST00000441725 MAP2K1Q02750 393 aaPredicted RBP4.58□□□□□ -1.68
CDC42BPA-207ENST00000441725 GAGE13Q4V321 117 aa4.58□□□□□ -1.68
CDC42BPA-207ENST00000441725 CCDC92Q53HC0 331 aaPredicted RBP4.58□□□□□ -1.68
CDC42BPA-207ENST00000441725 TTC22Q5TAA0 569 aa4.58□□□□□ -1.68
CDC42BPA-207ENST00000441725 MANEALQ5VSG8 457 aa4.58□□□□□ -1.68
CDC42BPA-207ENST00000441725 RINT1Q6NUQ1 792 aa4.58□□□□□ -1.68
CDC42BPA-207ENST00000441725 ANKS1BQ7Z6G8 1248 aa4.58□□□□□ -1.68
CDC42BPA-207ENST00000441725 CHD1LQ86WJ1 897 aa4.58□□□□□ -1.68
CDC42BPA-207ENST00000441725 IGDCC3Q8IVU1 814 aa4.58□□□□□ -1.68
CDC42BPA-207ENST00000441725 NRSN1Q8IZ57 195 aa4.58□□□□□ -1.68
CDC42BPA-207ENST00000441725 PDPRQ8NCN5 879 aa4.58□□□□□ -1.68
CDC42BPA-207ENST00000441725 C3orf49Q96BT1 292 aa4.58□□□□□ -1.68
CDC42BPA-207ENST00000441725 GRAMD1AQ96CP6 724 aa4.58□□□□□ -1.68
CDC42BPA-207ENST00000441725 TREX2Q9BQ50 279 aaPredicted RBP4.58□□□□□ -1.68
CDC42BPA-207ENST00000441725 ZBTB26Q9HCK0 441 aa4.58□□□□□ -1.68
CDC42BPA-207ENST00000441725 G6PC2Q9NQR9 355 aa4.58□□□□□ -1.68
CDC42BPA-207ENST00000441725 FSCN3Q9NQT6 498 aa4.58□□□□□ -1.68
CDC42BPA-207ENST00000441725 SIRT5Q9NXA8 310 aa4.58□□□□□ -1.68
CDC42BPA-207ENST00000441725 HESX1Q9UBX0 185 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms