RNA–Protein interactions for RNA: ENST00000441310.6

PMS1-213, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMS1, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-213ENST00000441310 TMPRSS6Q8IU80 811 aa17.58■□□□□ 0.41
PMS1-213ENST00000441310 GRK7Q8WTQ7 553 aa17.58■□□□□ 0.41
PMS1-213ENST00000441310 TAAR1Q96RJ0 339 aa17.58■□□□□ 0.41
PMS1-213ENST00000441310 PCDHB18PQ96TA0 734 aa17.58■□□□□ 0.41
PMS1-213ENST00000441310 MTO1Q9Y2Z2 717 aaKnown RBP17.58■□□□□ 0.41
PMS1-213ENST00000441310 FAM237BA0A1B0GVD1 139 aa17.58■□□□□ 0.4
PMS1-213ENST00000441310 SLC16A3O15427 465 aaKnown RBP17.58■□□□□ 0.4
PMS1-213ENST00000441310 CYP26A1O43174 497 aa17.58■□□□□ 0.4
PMS1-213ENST00000441310 ICAM1P05362 532 aa17.58■□□□□ 0.4
PMS1-213ENST00000441310 BCRP11274 1271 aa17.58■□□□□ 0.4
PMS1-213ENST00000441310 GTF2H1P32780 548 aa17.58■□□□□ 0.4
PMS1-213ENST00000441310 CYP2J2P51589 502 aa17.58■□□□□ 0.4
PMS1-213ENST00000441310 ITGA9Q13797 1035 aa17.58■□□□□ 0.4
PMS1-213ENST00000441310 MTMR14Q8NCE2 650 aa17.58■□□□□ 0.4
PMS1-213ENST00000441310 HIPK4Q8NE63 616 aa17.58■□□□□ 0.4
PMS1-213ENST00000441310 GSTCDQ8NEC7 633 aa17.58■□□□□ 0.4
PMS1-213ENST00000441310 SLC16A10Q8TF71 515 aa17.58■□□□□ 0.4
PMS1-213ENST00000441310 GRIP2Q9C0E4 1043 aa17.58■□□□□ 0.4
PMS1-213ENST00000441310 UBE2TQ9NPD8 197 aaPredicted RBP17.58■□□□□ 0.4
PMS1-213ENST00000441310 NDUFA13Q9P0J0 144 aa17.58■□□□□ 0.4
PMS1-213ENST00000441310 PEX2P28328 305 aa17.57■□□□□ 0.4
PMS1-213ENST00000441310 CHN2P52757 468 aa17.57■□□□□ 0.4
PMS1-213ENST00000441310 EMP3P54852 163 aa17.57■□□□□ 0.4
PMS1-213ENST00000441310 KRT72Q14CN4 511 aa17.57■□□□□ 0.4
PMS1-213ENST00000441310 PSPC1Q8WXF1 523 aaKnown RBP17.57■□□□□ 0.4
PMS1-213ENST00000441310 SENP1Q9P0U3 644 aa17.57■□□□□ 0.4
PMS1-213ENST00000441310 WDR37Q9Y2I8 494 aa17.57■□□□□ 0.4
PMS1-213ENST00000441310 C15orf38-AP3S2A0A0A6YYH1 394 aa17.57■□□□□ 0.4
PMS1-213ENST00000441310 ZNF24P17028 368 aa17.57■□□□□ 0.4
PMS1-213ENST00000441310 PCSK6P29122 969 aa17.57■□□□□ 0.4
PMS1-213ENST00000441310 MLH1P40692 756 aa17.57■□□□□ 0.4
PMS1-213ENST00000441310 SP4Q02446 784 aa17.57■□□□□ 0.4
PMS1-213ENST00000441310 HNRNPDQ14103 355 aaKnown RBP17.57■□□□□ 0.4
PMS1-213ENST00000441310 KIF22Q14807 665 aa17.57■□□□□ 0.4
PMS1-213ENST00000441310 NADK2Q4G0N4 442 aa17.57■□□□□ 0.4
PMS1-213ENST00000441310 ODR4Q5SWX8 454 aa17.57■□□□□ 0.4
PMS1-213ENST00000441310 C1orf186Q6ZWK4 172 aa17.57■□□□□ 0.4
PMS1-213ENST00000441310 ARPINQ7Z6K5 226 aa17.57■□□□□ 0.4
PMS1-213ENST00000441310 PRICKLE1Q96MT3 831 aaPredicted RBP17.57■□□□□ 0.4
PMS1-213ENST00000441310 TEKT3Q9BXF9 490 aa17.57■□□□□ 0.4
PMS1-213ENST00000441310 RPAP3Q9H6T3 665 aaPredicted RBP17.57■□□□□ 0.4
PMS1-213ENST00000441310 PFDN4Q9NQP4 134 aa17.57■□□□□ 0.4
PMS1-213ENST00000441310 INIPQ9NRY2 104 aa17.57■□□□□ 0.4
PMS1-213ENST00000441310 PPARGC1AQ9UBK2 798 aaKnown RBP17.57■□□□□ 0.4
PMS1-213ENST00000441310 COL2A1P02458 1487 aaPredicted RBP17.57■□□□□ 0.4
PMS1-213ENST00000441310 ARHGAP42A6NI28 874 aa17.57■□□□□ 0.4
PMS1-213ENST00000441310 PSMC2P35998 433 aaKnown RBP17.57■□□□□ 0.4
PMS1-213ENST00000441310 SLC18A1P54219 525 aa17.57■□□□□ 0.4
PMS1-213ENST00000441310 RPS6P62753 249 aaKnown RBP17.57■□□□□ 0.4
PMS1-213ENST00000441310 GRM2Q14416 872 aa17.57■□□□□ 0.4
PMS1-213ENST00000441310 DHDDSQ86SQ9 333 aa17.57■□□□□ 0.4
PMS1-213ENST00000441310 CLEC4DQ8WXI8 215 aa17.57■□□□□ 0.4
PMS1-213ENST00000441310 MXRA8Q9BRK3 442 aa17.57■□□□□ 0.4
PMS1-213ENST00000441310 PLVAPQ9BX97 442 aa17.57■□□□□ 0.4
PMS1-213ENST00000441310 SMYD3Q9H7B4 428 aa17.57■□□□□ 0.4
PMS1-213ENST00000441310 MEI4A8MW99 385 aa17.56■□□□□ 0.4
PMS1-213ENST00000441310 DNAJC6O75061 913 aa17.56■□□□□ 0.4
PMS1-213ENST00000441310 TM7SF2O76062 418 aa17.56■□□□□ 0.4
PMS1-213ENST00000441310 CLPTM1O96005 669 aa17.56■□□□□ 0.4
PMS1-213ENST00000441310 MYL7Q01449 175 aa17.56■□□□□ 0.4
PMS1-213ENST00000441310 KLHL35Q6PF15 583 aa17.56■□□□□ 0.4
PMS1-213ENST00000441310 MIER3Q7Z3K6 550 aa17.56■□□□□ 0.4
PMS1-213ENST00000441310 SLC26A7Q8TE54 656 aa17.56■□□□□ 0.4
PMS1-213ENST00000441310 EHMT1Q9H9B1 1298 aa17.56■□□□□ 0.4
PMS1-213ENST00000441310 ZNF180Q9UJW8 692 aa17.56■□□□□ 0.4
PMS1-213ENST00000441310 RIPK3Q9Y572 518 aa17.56■□□□□ 0.4
PMS1-213ENST00000441310 TRIM43BA6NCK2 446 aa17.56■□□□□ 0.4
PMS1-213ENST00000441310 ABHD2P08910 425 aa17.56■□□□□ 0.4
PMS1-213ENST00000441310 SMIM18P0DKX4 95 aa17.56■□□□□ 0.4
PMS1-213ENST00000441310 BTG3Q14201 252 aaPredicted RBP17.56■□□□□ 0.4
PMS1-213ENST00000441310 EFTUD2Q15029 972 aaKnown RBP eCLIP17.56■□□□□ 0.4
PMS1-213ENST00000441310 FBXL19Q6PCT2 694 aa17.56■□□□□ 0.4
PMS1-213ENST00000441310 SYDE1Q6ZW31 735 aaPredicted RBP17.56■□□□□ 0.4
PMS1-213ENST00000441310 FAM178BQ8IXR5 827 aa17.56■□□□□ 0.4
PMS1-213ENST00000441310 GDPD5Q8WTR4 605 aa17.56■□□□□ 0.4
PMS1-213ENST00000441310 TTC17Q96AE7 1141 aa17.56■□□□□ 0.4
PMS1-213ENST00000441310 ATG4CQ96DT6 458 aa17.56■□□□□ 0.4
PMS1-213ENST00000441310 SYNPO2Q9UMS6 1093 aa17.56■□□□□ 0.4
PMS1-213ENST00000441310 NEU2Q9Y3R4 380 aa17.56■□□□□ 0.4
PMS1-213ENST00000441310 ARHGEF35A5YM69 484 aa17.55■□□□□ 0.4
PMS1-213ENST00000441310 TISP43B9A030 160 aa17.55■□□□□ 0.4
PMS1-213ENST00000441310 TGFB1I1O43294 461 aa17.55■□□□□ 0.4
PMS1-213ENST00000441310 BANF1O75531 89 aa17.55■□□□□ 0.4
PMS1-213ENST00000441310 SERPINB8P50452 374 aa17.55■□□□□ 0.4
PMS1-213ENST00000441310 NOP14P78316 857 aaKnown RBP17.55■□□□□ 0.4
PMS1-213ENST00000441310 PDIA2Q13087 525 aaKnown RBP17.55■□□□□ 0.4
PMS1-213ENST00000441310 SMYD1Q8NB12 490 aa17.55■□□□□ 0.4
PMS1-213ENST00000441310 FAM172AQ8WUF8 416 aa17.55■□□□□ 0.4
PMS1-213ENST00000441310 KLHL4Q9C0H6 718 aa17.55■□□□□ 0.4
PMS1-213ENST00000441310 PARVGQ9HBI0 331 aa17.55■□□□□ 0.4
PMS1-213ENST00000441310 TESPA1A2RU30 521 aaPredicted RBP17.55■□□□□ 0.4
PMS1-213ENST00000441310 TFAP2AP05549 437 aa17.55■□□□□ 0.4
PMS1-213ENST00000441310 DLDP09622 509 aaKnown RBP17.55■□□□□ 0.4
PMS1-213ENST00000441310 RPL5P46777 297 aaKnown RBP17.55■□□□□ 0.4
PMS1-213ENST00000441310 GEMIN4P57678 1058 aaKnown RBP17.55■□□□□ 0.4
PMS1-213ENST00000441310 TGFB2P61812 414 aa17.55■□□□□ 0.4
PMS1-213ENST00000441310 MRPS9P82933 396 aaKnown RBP17.55■□□□□ 0.4
PMS1-213ENST00000441310 TBL3Q12788 808 aaKnown RBP17.55■□□□□ 0.4
PMS1-213ENST00000441310 TRIP10Q15642 601 aa17.55■□□□□ 0.4
PMS1-213ENST00000441310 GRAMD1BQ3KR37 738 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms